RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 KLK9Q9UKQ9 250 aa10.6□□□□□ -0.71
VMP1-210ENST00000589823 NDUFB8O95169 186 aa10.59□□□□□ -0.71
VMP1-210ENST00000589823 MFAP2P55001 183 aa10.59□□□□□ -0.71
VMP1-210ENST00000589823 TAS2R30P59541 319 aa10.59□□□□□ -0.71
VMP1-210ENST00000589823 RAB11AP62491 216 aa10.59□□□□□ -0.71
VMP1-210ENST00000589823 C15orf32Q32M92 178 aa10.59□□□□□ -0.71
VMP1-210ENST00000589823 NSUN5P1Q3KNT7 163 aa10.59□□□□□ -0.71
VMP1-210ENST00000589823 LRRC37A5PQ49AS3 106 aa10.59□□□□□ -0.71
VMP1-210ENST00000589823 SMIM8Q96KF7 97 aa10.59□□□□□ -0.71
VMP1-210ENST00000589823 CXorf58Q96LI9 332 aa10.59□□□□□ -0.71
VMP1-210ENST00000589823 PSENENQ9NZ42 101 aa10.59□□□□□ -0.71
VMP1-210ENST00000589823 PAIP2BQ9ULR5 123 aaKnown RBP10.59□□□□□ -0.71
VMP1-210ENST00000589823 STRAPQ9Y3F4 350 aaKnown RBP10.59□□□□□ -0.71
VMP1-210ENST00000589823 DMRT1Q9Y5R6 373 aa10.59□□□□□ -0.71
VMP1-210ENST00000589823 COL6A5A8TX70 2615 aa10.59□□□□□ -0.71
VMP1-210ENST00000589823 IGHV3-11P01762 117 aa10.58□□□□□ -0.72
VMP1-210ENST00000589823 IFNA4P05014 189 aa10.58□□□□□ -0.72
VMP1-210ENST00000589823 OR8U8P0C7N1 319 aa10.58□□□□□ -0.72
VMP1-210ENST00000589823 PET100P0DJ07 73 aa10.58□□□□□ -0.72
VMP1-210ENST00000589823 EXOSC2Q13868 293 aaKnown RBP10.58□□□□□ -0.72
VMP1-210ENST00000589823 KIAA0141Q14154 515 aaPredicted RBP10.58□□□□□ -0.72
VMP1-210ENST00000589823 SPANXN5Q5MJ07 72 aa10.58□□□□□ -0.72
VMP1-210ENST00000589823 KLHL30-AS1Q8NEE0 82 aa10.58□□□□□ -0.72
VMP1-210ENST00000589823 PPP1R1CQ8WVI7 109 aa10.58□□□□□ -0.72
VMP1-210ENST00000589823 C4orf3Q8WVX3 66 aa10.58□□□□□ -0.72
VMP1-210ENST00000589823 ASB13Q8WXK3 278 aa10.58□□□□□ -0.72
VMP1-210ENST00000589823 EEF1AKMT3Q96AZ1 226 aa10.58□□□□□ -0.72
VMP1-210ENST00000589823 PINX1Q96BK5 328 aaKnown RBP10.58□□□□□ -0.72
VMP1-210ENST00000589823 OR5B12Q96R08 314 aa10.58□□□□□ -0.72
VMP1-210ENST00000589823 ZNF436Q9C0F3 470 aaPredicted RBP10.58□□□□□ -0.72
VMP1-210ENST00000589823 RPS10-NUDT3A0A1W2PQS6 291 aa10.57□□□□□ -0.72
VMP1-210ENST00000589823 H3BP45 60 aa10.57□□□□□ -0.72
VMP1-210ENST00000589823 MT-CO2P00403 227 aa10.57□□□□□ -0.72
VMP1-210ENST00000589823 GIPP09681 153 aaPredicted RBP10.57□□□□□ -0.72
VMP1-210ENST00000589823 PVRIGQ6DKI7 326 aa10.57□□□□□ -0.72
VMP1-210ENST00000589823 RNASEH2CQ8TDP1 164 aaKnown RBP10.57□□□□□ -0.72
VMP1-210ENST00000589823 VN1R17PQ8TDU5 208 aa10.57□□□□□ -0.72
VMP1-210ENST00000589823 GNB4Q9HAV0 340 aa10.57□□□□□ -0.72
VMP1-210ENST00000589823 TRBV7-1A0A0A6YYK4 115 aa10.56□□□□□ -0.72
VMP1-210ENST00000589823 IGHV3-21A0A0B4J1V1 117 aa10.56□□□□□ -0.72
VMP1-210ENST00000589823 MFSD2BA6NFX1 497 aa10.56□□□□□ -0.72
VMP1-210ENST00000589823 C15orf62A8K5M9 175 aa10.56□□□□□ -0.72
VMP1-210ENST00000589823 K7EIM0 57 aa10.56□□□□□ -0.72
VMP1-210ENST00000589823 TSC22D2O75157 780 aa10.56□□□□□ -0.72
VMP1-210ENST00000589823 DEDDO75618 318 aa10.56□□□□□ -0.72
VMP1-210ENST00000589823 LGALS1P09382 135 aaKnown RBP10.56□□□□□ -0.72
VMP1-210ENST00000589823 OPRK1P41145 380 aa10.56□□□□□ -0.72
VMP1-210ENST00000589823 BCAP31P51572 246 aa10.56□□□□□ -0.72
VMP1-210ENST00000589823 PAX9P55771 341 aa10.56□□□□□ -0.72
VMP1-210ENST00000589823 RAP2BP61225 183 aa10.56□□□□□ -0.72
VMP1-210ENST00000589823 FAM209BQ5JX69 171 aa10.56□□□□□ -0.72
VMP1-210ENST00000589823 ZNF343Q6P1L6 599 aa10.56□□□□□ -0.72
VMP1-210ENST00000589823 ETV3LQ6ZN32 361 aa10.56□□□□□ -0.72
VMP1-210ENST00000589823 C18orf65Q6ZTR6 163 aa10.56□□□□□ -0.72
VMP1-210ENST00000589823 TMEM170AQ8WVE7 144 aa10.56□□□□□ -0.72
VMP1-210ENST00000589823 WDR89Q96FK6 387 aaPredicted RBP10.56□□□□□ -0.72
VMP1-210ENST00000589823 OR4C12Q96R67 309 aa10.56□□□□□ -0.72
VMP1-210ENST00000589823 hCG_2014768A0A024R1R8 64 aa10.55□□□□□ -0.72
VMP1-210ENST00000589823 ADARB2-AS1A8MUL3 147 aa10.55□□□□□ -0.72
VMP1-210ENST00000589823 E5RGE8 158 aa10.55□□□□□ -0.72
VMP1-210ENST00000589823 I3L2K1 104 aa10.55□□□□□ -0.72
VMP1-210ENST00000589823 I3L521 148 aa10.55□□□□□ -0.72
VMP1-210ENST00000589823 MPC2O95563 127 aa10.55□□□□□ -0.72
VMP1-210ENST00000589823 TMEM50AO95807 157 aa10.55□□□□□ -0.72
VMP1-210ENST00000589823 IGHV3-23P01764 117 aa10.55□□□□□ -0.72
VMP1-210ENST00000589823 CAV2P51636 162 aa10.55□□□□□ -0.72
VMP1-210ENST00000589823 RUNX1Q01196 453 aa10.55□□□□□ -0.72
VMP1-210ENST00000589823 FGL1Q08830 312 aa10.55□□□□□ -0.72
VMP1-210ENST00000589823 ETFRF1Q6IPR1 90 aa10.55□□□□□ -0.72
VMP1-210ENST00000589823 C8orf86Q6ZUL3 223 aa10.55□□□□□ -0.72
VMP1-210ENST00000589823 SPATA3Q8NHX4 192 aa10.55□□□□□ -0.72
VMP1-210ENST00000589823 SCARB1Q8WTV0 552 aa10.55□□□□□ -0.72
VMP1-210ENST00000589823 C21orf62Q9NYP8 219 aa10.55□□□□□ -0.72
VMP1-210ENST00000589823 S4R3C0 116 aa10.55□□□□□ -0.72
VMP1-210ENST00000589823 ANK2Q01484 3957 aa10.55□□□□□ -0.72
VMP1-210ENST00000589823 TENM1Q9UKZ4 2725 aa10.54□□□□□ -0.72
VMP1-210ENST00000589823 ANKRD34BA5PLL1 514 aa10.54□□□□□ -0.72
VMP1-210ENST00000589823 M0QZ24 198 aa10.54□□□□□ -0.72
VMP1-210ENST00000589823 MFAP4P55083 255 aa10.54□□□□□ -0.72
VMP1-210ENST00000589823 Q56UQ5 140 aa10.54□□□□□ -0.72
VMP1-210ENST00000589823 ACSM6Q6P461 480 aa10.54□□□□□ -0.72
VMP1-210ENST00000589823 PRSS54Q6PEW0 395 aa10.54□□□□□ -0.72
VMP1-210ENST00000589823 TMEM14EPQ6UXP3 125 aa10.54□□□□□ -0.72
VMP1-210ENST00000589823 UBAC2Q8NBM4 344 aa10.54□□□□□ -0.72
VMP1-210ENST00000589823 OR4F17Q8NGA8 305 aa10.54□□□□□ -0.72
VMP1-210ENST00000589823 THAP6Q8TBB0 222 aa10.54□□□□□ -0.72
VMP1-210ENST00000589823 DPF1Q92782 380 aa10.54□□□□□ -0.72
VMP1-210ENST00000589823 OR4F4Q96R69 305 aa10.54□□□□□ -0.72
VMP1-210ENST00000589823 C11orf1Q9H5F2 150 aa10.54□□□□□ -0.72
VMP1-210ENST00000589823 GAR1Q9NY12 217 aaKnown RBP10.54□□□□□ -0.72
VMP1-210ENST00000589823 OR5AC2Q9NZP5 309 aa10.54□□□□□ -0.72
VMP1-210ENST00000589823 PEF1Q9UBV8 284 aaKnown RBP10.54□□□□□ -0.72
VMP1-210ENST00000589823 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.53□□□□□ -0.72
VMP1-210ENST00000589823 H0YIZ8 118 aa10.53□□□□□ -0.72
VMP1-210ENST00000589823 SCAF4O95104 1147 aaKnown RBP10.53□□□□□ -0.72
VMP1-210ENST00000589823 IGHV3-48P01763 117 aa10.53□□□□□ -0.72
VMP1-210ENST00000589823 HSPB1P04792 205 aaKnown RBP10.53□□□□□ -0.72
VMP1-210ENST00000589823 METTL15P1P0C7V9 234 aa10.53□□□□□ -0.72
VMP1-210ENST00000589823 SLC25A4P12235 298 aa10.53□□□□□ -0.72
VMP1-210ENST00000589823 GPX4P36969 197 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms