RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 PIGBOS1A0A0B4J2F0 54 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 A0A1B0GVG6 124 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 CYB5BO43169 146 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 SAP30O75446 220 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 RBMXL2O75526 392 aaKnown RBP7.97□□□□□ -1.13
SDF2-208ENST00000589788 OR2J3O76001 311 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 CRYGCP07315 174 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 TRAPPC2P0DI81 140 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 TRAPPC2BP0DI82 140 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 HIST1H1BP16401 226 aaKnown RBP7.97□□□□□ -1.13
SDF2-208ENST00000589788 INSL3P51460 131 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 SRPXP78539 464 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 TMEM187Q14656 261 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 C15orf32Q32M92 178 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 FAM209BQ5JX69 171 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 HSD17B13Q7Z5P4 300 aaPredicted RBP7.97□□□□□ -1.13
SDF2-208ENST00000589788 CADM3Q8N126 398 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 C12orf45Q8N5I9 185 aaPredicted RBP7.97□□□□□ -1.13
SDF2-208ENST00000589788 LRTM2Q8N967 370 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 OR4A16Q8NH70 328 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 COQ8AQ8NI60 647 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 TMEM56Q96MV1 263 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 OR4C12Q96R67 309 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 SRSF8Q9BRL6 282 aaKnown RBP7.97□□□□□ -1.13
SDF2-208ENST00000589788 FKBP11Q9NYL4 201 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 NSG2Q9Y328 171 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 OR51B2Q9Y5P1 312 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 TMEM56-RWDD3S4R434 201 aa7.97□□□□□ -1.13
SDF2-208ENST00000589788 TEX50A0A1B0GTY4 177 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 IGLC7A0M8Q6 106 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 CGB1A6NKQ9 187 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 DBX1A6NMT0 343 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 ATG12O94817 140 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 CDS2O95674 445 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 IGKV1-39P01597 117 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 IGKV1D-39P04432 117 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 OR13C7P0DN81 318 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 CTRB1P17538 263 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 AKR1C2P52895 323 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 RPEL1Q2QD12 228 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 ANKRD55Q3KP44 614 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 SP6Q3SY56 376 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 CTRB2Q6GPI1 263 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 C19orf35Q6ZS72 473 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 ZNF429Q86V71 674 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 LGI3Q8N145 548 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 OR10W1Q8NGF6 305 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 RNASE11Q8TAA1 199 aaKnown RBP7.96□□□□□ -1.14
SDF2-208ENST00000589788 IL22RA2Q969J5 263 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 SEC22AQ96IW7 307 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 SPATA25Q9BR10 227 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 ELOVL1Q9BW60 279 aa7.96□□□□□ -1.14
SDF2-208ENST00000589788 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.95□□□□□ -1.14
SDF2-208ENST00000589788 DUXBA0A1W2PPF3 345 aa7.95□□□□□ -1.14
SDF2-208ENST00000589788 C15orf61A6NNL5 157 aa7.95□□□□□ -1.14
SDF2-208ENST00000589788 SSNA1O43805 119 aa7.95□□□□□ -1.14
SDF2-208ENST00000589788 TRBV12-3P01733 135 aa7.95□□□□□ -1.14
SDF2-208ENST00000589788 SYNJ2BPP57105 145 aa7.95□□□□□ -1.14
SDF2-208ENST00000589788 RRAS2P62070 204 aaPredicted RBP7.95□□□□□ -1.14
SDF2-208ENST00000589788 DEFB121Q5J5C9 76 aa7.95□□□□□ -1.14
SDF2-208ENST00000589788 ACSM6Q6P461 480 aa7.95□□□□□ -1.14
SDF2-208ENST00000589788 OR5B3Q8NH48 314 aa7.95□□□□□ -1.14
SDF2-208ENST00000589788 LHFPL5Q8TAF8 219 aa7.95□□□□□ -1.14
SDF2-208ENST00000589788 RBPMSQ93062 196 aaKnown RBP7.95□□□□□ -1.14
SDF2-208ENST00000589788 LSM10Q969L4 123 aaKnown RBP7.95□□□□□ -1.14
SDF2-208ENST00000589788 EEF1AKMT3Q96AZ1 226 aa7.95□□□□□ -1.14
SDF2-208ENST00000589788 MED28Q9H204 178 aa7.95□□□□□ -1.14
SDF2-208ENST00000589788 TMEM14BQ9NUH8 114 aa7.95□□□□□ -1.14
SDF2-208ENST00000589788 THYN1Q9P016 225 aa7.95□□□□□ -1.14
SDF2-208ENST00000589788 IGLV11-55A0A075B6I3 123 aa7.94□□□□□ -1.14
SDF2-208ENST00000589788 WI2-2373I1.2A0A1W2PRP0 233 aa7.94□□□□□ -1.14
SDF2-208ENST00000589788 K7EIL1 84 aa7.94□□□□□ -1.14
SDF2-208ENST00000589788 NDUFB8O95169 186 aa7.94□□□□□ -1.14
SDF2-208ENST00000589788 IGHV3-23P01764 117 aa7.94□□□□□ -1.14
SDF2-208ENST00000589788 SULT1A3P0DMM9 295 aa7.94□□□□□ -1.14
SDF2-208ENST00000589788 SULT1A4P0DMN0 295 aa7.94□□□□□ -1.14
SDF2-208ENST00000589788 BCAP31P51572 246 aa7.94□□□□□ -1.14
SDF2-208ENST00000589788 KLF5Q13887 457 aaPredicted RBP7.94□□□□□ -1.14
SDF2-208ENST00000589788 TMEM268Q5VZI3 342 aa7.94□□□□□ -1.14
SDF2-208ENST00000589788 SLC25A24Q6NUK1 477 aa7.94□□□□□ -1.14
SDF2-208ENST00000589788 SELENOHQ8IZQ5 122 aaKnown RBP7.94□□□□□ -1.14
SDF2-208ENST00000589788 RRNAD1Q96FB5 475 aaKnown RBP7.94□□□□□ -1.14
SDF2-208ENST00000589788 CXorf58Q96LI9 332 aa7.94□□□□□ -1.14
SDF2-208ENST00000589788 NDUFA4L2Q9NRX3 87 aa7.94□□□□□ -1.14
SDF2-208ENST00000589788 S4R3C0 116 aa7.94□□□□□ -1.14
SDF2-208ENST00000589788 TRBV7-1A0A0A6YYK4 115 aa7.93□□□□□ -1.14
SDF2-208ENST00000589788 BMPR1BO00238 502 aa7.93□□□□□ -1.14
SDF2-208ENST00000589788 IGKV1-5P01602 117 aa7.93□□□□□ -1.14
SDF2-208ENST00000589788 WT1-ASQ06250 92 aa7.93□□□□□ -1.14
SDF2-208ENST00000589788 SLC35G3Q8N808 338 aa7.93□□□□□ -1.14
SDF2-208ENST00000589788 UXS1Q8NBZ7 420 aa7.93□□□□□ -1.14
SDF2-208ENST00000589788 OR9G4Q8NGQ1 327 aa7.93□□□□□ -1.14
SDF2-208ENST00000589788 PRR25Q96S07 402 aa7.93□□□□□ -1.14
SDF2-208ENST00000589788 PDCD10Q9BUL8 212 aa7.93□□□□□ -1.14
SDF2-208ENST00000589788 PEMTQ9UBM1 199 aa7.93□□□□□ -1.14
SDF2-208ENST00000589788 ZNF256Q9Y2P7 627 aaPredicted RBP7.93□□□□□ -1.14
SDF2-208ENST00000589788 TMED3Q9Y3Q3 217 aa7.93□□□□□ -1.14
SDF2-208ENST00000589788 MFSD2BA6NFX1 497 aa7.92□□□□□ -1.14
SDF2-208ENST00000589788 PPP5D1E7EU14 171 aa7.92□□□□□ -1.14
SDF2-208ENST00000589788 GGCTO75223 188 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms