RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 PRR20AP86496 221 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 CD69Q07108 199 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 HLA-DRB5Q30154 266 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 MIC13Q5XKP0 118 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 ZNF841Q6ZN19 808 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 SLC16A13Q7RTY0 426 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 PNKDQ8N490 385 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 OR4F5Q8NH21 305 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 RNASEH2CQ8TDP1 164 aaKnown RBP8.05□□□□□ -1.12
VPS25-202ENST00000589219 CACNG8Q8WXS5 425 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 OR4F4Q96R69 305 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 RNF2Q99496 336 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 C19orf24Q9BVV8 132 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 CLEC7AQ9BXN2 247 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 SAV1Q9H4B6 383 aaPredicted RBP8.05□□□□□ -1.12
VPS25-202ENST00000589219 ACANP16112 2415 aa8.05□□□□□ -1.12
VPS25-202ENST00000589219 ZNF469Q96JG9 3925 aaPredicted RBP8.05□□□□□ -1.12
VPS25-202ENST00000589219 FLNAP21333 2647 aaKnown RBP8.05□□□□□ -1.12
VPS25-202ENST00000589219 C11orf94C9JXX5 98 aa8.04□□□□□ -1.12
VPS25-202ENST00000589219 HMGB3O15347 200 aaKnown RBP8.04□□□□□ -1.12
VPS25-202ENST00000589219 PAGE4O60829 102 aa8.04□□□□□ -1.12
VPS25-202ENST00000589219 IGLV1-47P01700 117 aa8.04□□□□□ -1.12
VPS25-202ENST00000589219 IGLV2-23P01705 113 aa8.04□□□□□ -1.12
VPS25-202ENST00000589219 OPN1MWP04001 364 aa8.04□□□□□ -1.12
VPS25-202ENST00000589219 OPN1MW2P0DN77 364 aa8.04□□□□□ -1.12
VPS25-202ENST00000589219 OPN1MW3P0DN78 364 aa8.04□□□□□ -1.12
VPS25-202ENST00000589219 MYOD1P15172 320 aa8.04□□□□□ -1.12
VPS25-202ENST00000589219 REG1BP48304 166 aa8.04□□□□□ -1.12
VPS25-202ENST00000589219 TMEM241Q24JQ0 296 aa8.04□□□□□ -1.12
VPS25-202ENST00000589219 C11orf71Q6IPW1 123 aa8.04□□□□□ -1.12
VPS25-202ENST00000589219 C11orf42Q8N5U0 333 aa8.04□□□□□ -1.12
VPS25-202ENST00000589219 TEX45Q8NA69 505 aa8.04□□□□□ -1.12
VPS25-202ENST00000589219 RPUSD4Q96CM3 377 aaKnown RBP8.04□□□□□ -1.12
VPS25-202ENST00000589219 PARLQ9H300 379 aa8.04□□□□□ -1.12
VPS25-202ENST00000589219 TMPRSS5Q9H3S3 457 aa8.04□□□□□ -1.12
VPS25-202ENST00000589219 CHODLQ9H9P2 273 aa8.04□□□□□ -1.12
VPS25-202ENST00000589219 SLC45A2Q9UMX9 530 aa8.04□□□□□ -1.12
VPS25-202ENST00000589219 NAV3Q8IVL0 2385 aa8.04□□□□□ -1.12
VPS25-202ENST00000589219 PPIAL4CA0A0B4J2A2 164 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 CLN5O75503 358 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 EIF3GO75821 320 aaKnown RBP eCLIP8.03□□□□□ -1.12
VPS25-202ENST00000589219 S100A6P06703 90 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 LIPFP07098 398 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 ARL14EPLP0DKL9 152 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 PPIAL4GP0DN37 164 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 COL8A2P25067 703 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 ELOBQ15370 118 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 ADIRFQ15847 76 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 SSX2Q16385 188 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 GCSAMLQ5JQS6 135 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 DTX2Q86UW9 622 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 MMD2Q8IY49 270 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 LRRC75A-AS1Q8N1F1 130 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 ZNF114Q8NC26 417 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 LY6G5BQ8NDX9 201 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 WFDC11Q8NEX6 87 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 SSMEM1Q8WWF3 244 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 C1orf159Q96HA4 380 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 RNF5Q99942 180 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 MRPL32Q9BYC8 188 aaKnown RBP8.03□□□□□ -1.12
VPS25-202ENST00000589219 ZNF430Q9H8G1 570 aaPredicted RBP8.03□□□□□ -1.12
VPS25-202ENST00000589219 PATZ1Q9HBE1 687 aaKnown RBP8.03□□□□□ -1.12
VPS25-202ENST00000589219 TMEM167BQ9NRX6 74 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 FUT9Q9Y231 359 aa8.03□□□□□ -1.12
VPS25-202ENST00000589219 VPS13CQ709C8 3753 aa8.02□□□□□ -1.12
VPS25-202ENST00000589219 M0R1W7 72 aa8.02□□□□□ -1.13
VPS25-202ENST00000589219 OR5G3P0C626 314 aa8.02□□□□□ -1.13
VPS25-202ENST00000589219 HOXB4P17483 251 aaPredicted RBP8.02□□□□□ -1.13
VPS25-202ENST00000589219 GCHFRP30047 84 aa8.02□□□□□ -1.13
VPS25-202ENST00000589219 TAS2R45P59539 299 aa8.02□□□□□ -1.13
VPS25-202ENST00000589219 RPL23P62829 140 aaKnown RBP8.02□□□□□ -1.13
VPS25-202ENST00000589219 PAX2Q02962 417 aa8.02□□□□□ -1.13
VPS25-202ENST00000589219 ZNF674Q2M3X9 581 aa8.02□□□□□ -1.13
VPS25-202ENST00000589219 ZFP82Q8N141 532 aa8.02□□□□□ -1.13
VPS25-202ENST00000589219 C2CD4CQ8TF44 421 aa8.02□□□□□ -1.13
VPS25-202ENST00000589219 Q8WTZ3 238 aa8.02□□□□□ -1.13
VPS25-202ENST00000589219 GATAD1Q8WUU5 269 aa8.02□□□□□ -1.13
VPS25-202ENST00000589219 ANAPC16Q96DE5 110 aa8.02□□□□□ -1.13
VPS25-202ENST00000589219 GSX1Q9H4S2 264 aaPredicted RBP8.02□□□□□ -1.13
VPS25-202ENST00000589219 DOK5Q9P104 306 aa8.02□□□□□ -1.13
VPS25-202ENST00000589219 TRBV24-1A0A075B6N3 115 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 IGHV1-3A0A0C4DH29 117 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 A0A1W2PPR1 153 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 LYNX1G3V0Z9 82 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 BUB1B-PAK6H3BSN5 160 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 H7BYZ3 331 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 CORTO00230 105 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 UBE2CO00762 179 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 SLC25A17O43808 307 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 LINC00869P0C866 280 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 LYNX1P0DP58 116 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 DEFA4P12838 97 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 AREGP15514 252 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 S100PP25815 95 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 OR10J1P30954 320 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 RPS10P46783 165 aaKnown RBP8.01□□□□□ -1.13
VPS25-202ENST00000589219 ATP5G3P48201 142 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 DIAPH2-AS1Q14236 149 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 GAMTQ14353 236 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 PRSS8Q16651 343 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms