RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 COA6Q5JTJ3 125 aaKnown RBP6.02□□□□□ -1.45
ZNF540-206ENST00000589117 OR1P1Q8NH06 330 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 SGMS2Q8NHU3 365 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 RNASEH2CQ8TDP1 164 aaKnown RBP6.02□□□□□ -1.45
ZNF540-206ENST00000589117 TMEM18Q96B42 140 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 KAAG1Q9UBP8 84 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 ZNF835Q9Y2P0 537 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 WASHC3Q9Y3C0 194 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 TTC28Q96AY4 2481 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 PRR14LQ5THK1 2151 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 HELTA6NFD8 242 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 IFITM10A6NMD0 228 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 H0YJW9 148 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 DVL1O14640 695 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 PHOX2AO14813 284 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 OR7C2O60412 319 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 MMP23AO75900 390 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 IGHV2-70P01814 119 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 HIST1H1BP16401 226 aaKnown RBP6.02□□□□□ -1.45
ZNF540-206ENST00000589117 SELENOTP62341 195 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 PSG5Q15238 335 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 ACTL10Q5JWF8 245 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 ETFRF1Q6IPR1 90 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 PRSS33Q8NF86 280 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 OR9G1Q8NH87 305 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 TMEM37Q8WXS4 190 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 RNASE6Q93091 150 aaKnown RBP6.02□□□□□ -1.45
ZNF540-206ENST00000589117 C11orf52Q96A22 123 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 MRPL32Q9BYC8 188 aaKnown RBP6.02□□□□□ -1.45
ZNF540-206ENST00000589117 NDUFA4L2Q9NRX3 87 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 SH3BGRL2Q9UJC5 107 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 TRAPPC1Q9Y5R8 145 aa6.02□□□□□ -1.45
ZNF540-206ENST00000589117 CNOT1A5YKK6 2376 aaKnown RBP6.01□□□□□ -1.45
ZNF540-206ENST00000589117 LOC400499M0QZD8 3231 aa6.01□□□□□ -1.45
ZNF540-206ENST00000589117 HCFC1P51610 2035 aa6.01□□□□□ -1.45
ZNF540-206ENST00000589117 SCO2A0A1W2PP80 73 aa6.01□□□□□ -1.45
ZNF540-206ENST00000589117 SRRM4A7MD48 611 aaKnown RBP6.01□□□□□ -1.45
ZNF540-206ENST00000589117 TSTD3H0UI37 97 aa6.01□□□□□ -1.45
ZNF540-206ENST00000589117 ACTL6BO94805 426 aa6.01□□□□□ -1.45
ZNF540-206ENST00000589117 LINC00869P0C866 280 aa6.01□□□□□ -1.45
ZNF540-206ENST00000589117 APOBEC3AP31941 199 aaPredicted RBP6.01□□□□□ -1.45
ZNF540-206ENST00000589117 GNG4P50150 75 aa6.01□□□□□ -1.45
ZNF540-206ENST00000589117 CNN1P51911 297 aaKnown RBP6.01□□□□□ -1.45
ZNF540-206ENST00000589117 PRRX1P54821 245 aa6.01□□□□□ -1.45
ZNF540-206ENST00000589117 GAMTQ14353 236 aa6.01□□□□□ -1.45
ZNF540-206ENST00000589117 TIGITQ495A1 244 aa6.01□□□□□ -1.45
ZNF540-206ENST00000589117 TGIF2LXQ8IUE1 241 aa6.01□□□□□ -1.45
ZNF540-206ENST00000589117 OR1L4Q8NGR5 311 aa6.01□□□□□ -1.45
ZNF540-206ENST00000589117 TMEM167AQ8TBQ9 72 aa6.01□□□□□ -1.45
ZNF540-206ENST00000589117 TNFRSF14Q92956 283 aa6.01□□□□□ -1.45
ZNF540-206ENST00000589117 HIST1H2BLQ99880 126 aa6.01□□□□□ -1.45
ZNF540-206ENST00000589117 ELOVL1Q9BW60 279 aa6.01□□□□□ -1.45
ZNF540-206ENST00000589117 MRPL20Q9BYC9 149 aaKnown RBP6.01□□□□□ -1.45
ZNF540-206ENST00000589117 LINC00587B1AMM8 73 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 GCGP01275 180 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 C8orf88P0DMB2 117 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 RNASE2P10153 161 aaKnown RBP6□□□□□ -1.45
ZNF540-206ENST00000589117 OR10J1P30954 320 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 PDLIM4P50479 330 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 BPIFB3P59826 476 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 ZNF90Q03938 601 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 CLEC12BQ2HXU8 276 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 UTF1Q5T230 341 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 GFI1BQ5VTD9 330 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 OR5R1Q8NH85 324 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 OCC1Q8TAD7 63 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 ZNF596Q8TC21 504 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 C22orf15Q8WYQ4 148 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 WFIKKN1Q96NZ8 548 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 VKORC1Q9BQB6 163 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 DERL1Q9BUN8 251 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 DNAJC4Q9NNZ3 241 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 YTHDF2Q9Y5A9 579 aaKnown RBP6□□□□□ -1.45
ZNF540-206ENST00000589117 CADP27708 2225 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 DYSFO75923 2080 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 IGHV1-69-2A0A0G2JMI3 117 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 A0A1W2PRE2 83 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 OR5G3P0C626 314 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 C1QTNF9P0C862 333 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 CCL3L1P16619 93 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 CHRNB4P30926 498 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 ZNF137PP52743 207 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 ERVFC1-1P60608 527 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 COX19Q49B96 90 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 TEX38Q6PEX7 206 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 ZCCHC24Q8N2G6 241 aaKnown RBP6□□□□□ -1.45
ZNF540-206ENST00000589117 STXBP6Q8NFX7 210 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 SNRNP40Q96DI7 357 aaKnown RBP6□□□□□ -1.45
ZNF540-206ENST00000589117 ZNF318Q5VUA4 2279 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 DSCAMO60469 2012 aa6□□□□□ -1.45
ZNF540-206ENST00000589117 A0A087X0M5 115 aa5.99□□□□□ -1.45
ZNF540-206ENST00000589117 A0A1B0GX30 115 aa5.99□□□□□ -1.45
ZNF540-206ENST00000589117 GATCO43716 136 aaKnown RBP5.99□□□□□ -1.45
ZNF540-206ENST00000589117 FOXH1O75593 365 aa5.99□□□□□ -1.45
ZNF540-206ENST00000589117 PKIAP61925 76 aa5.99□□□□□ -1.45
ZNF540-206ENST00000589117 DEFA6Q01524 100 aa5.99□□□□□ -1.45
ZNF540-206ENST00000589117 TBR1Q16650 682 aa5.99□□□□□ -1.45
ZNF540-206ENST00000589117 RPEL1Q2QD12 228 aa5.99□□□□□ -1.45
ZNF540-206ENST00000589117 MIR17HGQ75NE6 70 aa5.99□□□□□ -1.45
ZNF540-206ENST00000589117 SLC25A33Q9BSK2 321 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms