RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 ODF3L2Q3SX64 289 aa10.88□□□□□ -0.67
DNMT1-217ENST00000589091 KIR2DL5AQ8N109 375 aa10.88□□□□□ -0.67
DNMT1-217ENST00000589091 SLC35G3Q8N808 338 aa10.88□□□□□ -0.67
DNMT1-217ENST00000589091 TMEM229BQ8NBD8 167 aa10.88□□□□□ -0.67
DNMT1-217ENST00000589091 TMEM116Q8NCL8 245 aa10.88□□□□□ -0.67
DNMT1-217ENST00000589091 KIR2DL5BQ8NHK3 375 aa10.88□□□□□ -0.67
DNMT1-217ENST00000589091 GALNT14Q96FL9 552 aa10.88□□□□□ -0.67
DNMT1-217ENST00000589091 OR10C1Q96KK4 312 aa10.88□□□□□ -0.67
DNMT1-217ENST00000589091 GINS3Q9BRX5 216 aa10.88□□□□□ -0.67
DNMT1-217ENST00000589091 C6orf62Q9GZU0 229 aaPredicted RBP10.88□□□□□ -0.67
DNMT1-217ENST00000589091 NXF2Q9GZY0 626 aaKnown RBP10.88□□□□□ -0.67
DNMT1-217ENST00000589091 NAA50Q9GZZ1 169 aaKnown RBP10.88□□□□□ -0.67
DNMT1-217ENST00000589091 COPZ2Q9P299 210 aa10.88□□□□□ -0.67
DNMT1-217ENST00000589091 IGHV3OR16-8A0A075B7F1 116 aa10.87□□□□□ -0.67
DNMT1-217ENST00000589091 C3orf85A0A1B0GTC6 90 aa10.87□□□□□ -0.67
DNMT1-217ENST00000589091 ZNF207O43670 478 aaKnown RBP10.87□□□□□ -0.67
DNMT1-217ENST00000589091 YIF1AO95070 293 aa10.87□□□□□ -0.67
DNMT1-217ENST00000589091 CD74P04233 296 aa10.87□□□□□ -0.67
DNMT1-217ENST00000589091 SMIM18P0DKX4 95 aa10.87□□□□□ -0.67
DNMT1-217ENST00000589091 SNCAP37840 140 aa10.87□□□□□ -0.67
DNMT1-217ENST00000589091 NPBWR1P48145 328 aa10.87□□□□□ -0.67
DNMT1-217ENST00000589091 PPP5CP53041 499 aa10.87□□□□□ -0.67
DNMT1-217ENST00000589091 SUB1P53999 127 aaKnown RBP eCLIP10.87□□□□□ -0.67
DNMT1-217ENST00000589091 MRPS10P82664 201 aaKnown RBP10.87□□□□□ -0.67
DNMT1-217ENST00000589091 GPR107Q5VW38 600 aa10.87□□□□□ -0.67
DNMT1-217ENST00000589091 STPG3Q8N7X2 389 aa10.87□□□□□ -0.67
DNMT1-217ENST00000589091 DUSP18Q8NEJ0 188 aa10.87□□□□□ -0.67
DNMT1-217ENST00000589091 TERB2Q8NHR7 220 aa10.87□□□□□ -0.67
DNMT1-217ENST00000589091 PINX1Q96BK5 328 aaKnown RBP10.87□□□□□ -0.67
DNMT1-217ENST00000589091 TP53RKQ96S44 253 aa10.87□□□□□ -0.67
DNMT1-217ENST00000589091 RHPN1-AS1Q9BWJ2 59 aa10.87□□□□□ -0.67
DNMT1-217ENST00000589091 TRAV14DV4A0A0A6YYC5 116 aa10.86□□□□□ -0.67
DNMT1-217ENST00000589091 GABARAPH6UMI1 98 aa10.86□□□□□ -0.67
DNMT1-217ENST00000589091 CHEK1O14757 476 aa10.86□□□□□ -0.67
DNMT1-217ENST00000589091 SPRY2O43597 315 aa10.86□□□□□ -0.67
DNMT1-217ENST00000589091 RAB3DO95716 219 aa10.86□□□□□ -0.67
DNMT1-217ENST00000589091 IFNA17P01571 189 aa10.86□□□□□ -0.67
DNMT1-217ENST00000589091 IGKV1-5P01602 117 aa10.86□□□□□ -0.67
DNMT1-217ENST00000589091 P0C879 139 aa10.86□□□□□ -0.67
DNMT1-217ENST00000589091 PI3P19957 117 aa10.86□□□□□ -0.67
DNMT1-217ENST00000589091 TRIM16LQ309B1 348 aa10.86□□□□□ -0.67
DNMT1-217ENST00000589091 RRNAD1Q96FB5 475 aaKnown RBP10.86□□□□□ -0.67
DNMT1-217ENST00000589091 RNF2Q99496 336 aa10.86□□□□□ -0.67
DNMT1-217ENST00000589091 MRPS26Q9BYN8 205 aaKnown RBP10.86□□□□□ -0.67
DNMT1-217ENST00000589091 ENY2Q9NPA8 101 aa10.86□□□□□ -0.67
DNMT1-217ENST00000589091 PLA2G2EQ9NZK7 142 aa10.86□□□□□ -0.67
DNMT1-217ENST00000589091 RABL2AQ9UBK7 228 aaPredicted RBP10.86□□□□□ -0.67
DNMT1-217ENST00000589091 RABL2BQ9UNT1 228 aa10.86□□□□□ -0.67
DNMT1-217ENST00000589091 RGS5O15539 181 aa10.85□□□□□ -0.67
DNMT1-217ENST00000589091 ST8SIA3O43173 380 aa10.85□□□□□ -0.67
DNMT1-217ENST00000589091 SCGB2A1O75556 95 aa10.85□□□□□ -0.67
DNMT1-217ENST00000589091 UCP1P25874 307 aa10.85□□□□□ -0.67
DNMT1-217ENST00000589091 PAFAH1B2P68402 229 aa10.85□□□□□ -0.67
DNMT1-217ENST00000589091 TNFRSF9Q07011 255 aa10.85□□□□□ -0.67
DNMT1-217ENST00000589091 MEF2DQ14814 521 aa10.85□□□□□ -0.67
DNMT1-217ENST00000589091 DEFB135Q30KP9 77 aa10.85□□□□□ -0.67
DNMT1-217ENST00000589091 SCGB2B2Q4G0G5 96 aa10.85□□□□□ -0.67
DNMT1-217ENST00000589091 STEAP1BQ6NZ63 245 aa10.85□□□□□ -0.67
DNMT1-217ENST00000589091 ZNF600Q6ZNG1 722 aa10.85□□□□□ -0.67
DNMT1-217ENST00000589091 GPR141Q7Z602 305 aa10.85□□□□□ -0.67
DNMT1-217ENST00000589091 FAM219AQ8IW50 185 aa10.85□□□□□ -0.67
DNMT1-217ENST00000589091 RNASE11Q8TAA1 199 aaKnown RBP10.85□□□□□ -0.67
DNMT1-217ENST00000589091 ZNF414Q96IQ9 312 aa10.85□□□□□ -0.67
DNMT1-217ENST00000589091 ABHD1Q96SE0 405 aa10.85□□□□□ -0.67
DNMT1-217ENST00000589091 A0A0B4J293 547 aa10.84□□□□□ -0.67
DNMT1-217ENST00000589091 ATF4P18848 351 aaPredicted RBP10.84□□□□□ -0.67
DNMT1-217ENST00000589091 HOXA1P49639 335 aaPredicted RBP10.84□□□□□ -0.67
DNMT1-217ENST00000589091 IZUMO4Q1ZYL8 232 aa10.84□□□□□ -0.67
DNMT1-217ENST00000589091 SPINK9Q5DT21 86 aa10.84□□□□□ -0.67
DNMT1-217ENST00000589091 PVRIGQ6DKI7 326 aa10.84□□□□□ -0.67
DNMT1-217ENST00000589091 OR13C8Q8NGS7 320 aa10.84□□□□□ -0.67
DNMT1-217ENST00000589091 RNF183Q96D59 192 aa10.84□□□□□ -0.67
DNMT1-217ENST00000589091 TMEM231Q9H6L2 316 aa10.84□□□□□ -0.67
DNMT1-217ENST00000589091 C14orf166Q9Y224 244 aaKnown RBP10.84□□□□□ -0.67
DNMT1-217ENST00000589091 AGRNO00468 2067 aa10.83□□□□□ -0.68
DNMT1-217ENST00000589091 DISC1C4P0D8 188 aa10.83□□□□□ -0.68
DNMT1-217ENST00000589091 IGHV3-48P01763 117 aa10.83□□□□□ -0.68
DNMT1-217ENST00000589091 SURF2Q15527 256 aaPredicted RBP10.83□□□□□ -0.68
DNMT1-217ENST00000589091 FAM90A2PQ658T7 463 aa10.83□□□□□ -0.68
DNMT1-217ENST00000589091 LYG2Q86SG7 212 aa10.83□□□□□ -0.68
DNMT1-217ENST00000589091 OR4D10Q8NGI6 311 aa10.83□□□□□ -0.68
DNMT1-217ENST00000589091 MARCH1Q8TCQ1 289 aa10.83□□□□□ -0.68
DNMT1-217ENST00000589091 MIXL1Q9H2W2 232 aa10.83□□□□□ -0.68
DNMT1-217ENST00000589091 MAP6D1Q9H9H5 199 aa10.83□□□□□ -0.68
DNMT1-217ENST00000589091 SACSQ9NZJ4 4579 aa10.82□□□□□ -0.68
DNMT1-217ENST00000589091 A0A0J9YWU9 116 aa10.82□□□□□ -0.68
DNMT1-217ENST00000589091 NUPR2A6NF83 97 aa10.82□□□□□ -0.68
DNMT1-217ENST00000589091 TMEM50AO95807 157 aa10.82□□□□□ -0.68
DNMT1-217ENST00000589091 RNASE2P10153 161 aaKnown RBP10.82□□□□□ -0.68
DNMT1-217ENST00000589091 RPL35AP18077 110 aaKnown RBP10.82□□□□□ -0.68
DNMT1-217ENST00000589091 RPL5P46777 297 aaKnown RBP10.82□□□□□ -0.68
DNMT1-217ENST00000589091 ALDH3B2P48448 385 aa10.82□□□□□ -0.68
DNMT1-217ENST00000589091 DHODHQ02127 395 aa10.82□□□□□ -0.68
DNMT1-217ENST00000589091 SP6Q3SY56 376 aa10.82□□□□□ -0.68
DNMT1-217ENST00000589091 TOMM20LQ6UXN7 152 aa10.82□□□□□ -0.68
DNMT1-217ENST00000589091 TCF24Q7RTU0 167 aa10.82□□□□□ -0.68
DNMT1-217ENST00000589091 TMEM217Q8N7C4 229 aa10.82□□□□□ -0.68
DNMT1-217ENST00000589091 OR52E5Q8NH55 327 aa10.82□□□□□ -0.68
DNMT1-217ENST00000589091 SMIM4Q8WVI0 70 aa10.82□□□□□ -0.68
DNMT1-217ENST00000589091 TMEM222Q9H0R3 208 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms