RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 CAV2P51636 162 aa13.25□□□□□ -0.29
SCAMP4-211ENST00000588907 TPPP2P59282 170 aa13.25□□□□□ -0.29
SCAMP4-211ENST00000588907 AWAT1Q58HT5 328 aa13.25□□□□□ -0.29
SCAMP4-211ENST00000588907 ETFRF1Q6IPR1 90 aa13.25□□□□□ -0.29
SCAMP4-211ENST00000588907 TAF15Q92804 592 aaKnown RBP eCLIP13.25□□□□□ -0.29
SCAMP4-211ENST00000588907 C11orf1Q9H5F2 150 aa13.25□□□□□ -0.29
SCAMP4-211ENST00000588907 MBD2Q9UBB5 411 aa13.25□□□□□ -0.29
SCAMP4-211ENST00000588907 ATRQ13535 2644 aa13.25□□□□□ -0.29
SCAMP4-211ENST00000588907 C15orf62A8K5M9 175 aa13.24□□□□□ -0.29
SCAMP4-211ENST00000588907 HAX1O00165 279 aa13.24□□□□□ -0.29
SCAMP4-211ENST00000588907 SLC25A4P12235 298 aa13.24□□□□□ -0.29
SCAMP4-211ENST00000588907 NUP62P37198 522 aaPredicted RBP13.24□□□□□ -0.29
SCAMP4-211ENST00000588907 PAX9P55771 341 aa13.24□□□□□ -0.29
SCAMP4-211ENST00000588907 RHOGP84095 191 aa13.24□□□□□ -0.29
SCAMP4-211ENST00000588907 BAXQ07812 192 aa13.24□□□□□ -0.29
SCAMP4-211ENST00000588907 TMEM14EPQ6UXP3 125 aa13.24□□□□□ -0.29
SCAMP4-211ENST00000588907 VN1R17PQ8TDU5 208 aa13.24□□□□□ -0.29
SCAMP4-211ENST00000588907 FANCD2OSQ96PS1 177 aa13.24□□□□□ -0.29
SCAMP4-211ENST00000588907 ATP6V0BQ99437 205 aa13.24□□□□□ -0.29
SCAMP4-211ENST00000588907 RANGRFQ9HD47 186 aaPredicted RBP13.24□□□□□ -0.29
SCAMP4-211ENST00000588907 H3BP45 60 aa13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 SCGB2A1O75556 95 aa13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 TMEM50AO95807 157 aa13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 OPRK1P41145 380 aa13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 HBG1P69891 147 aa13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 HBG2P69892 147 aa13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 ATP5G2Q06055 141 aa13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 MYOZ3Q8TDC0 251 aa13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 CACNG8Q8WXS5 425 aa13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 DCUN1D4Q92564 292 aa13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 PINX1Q96BK5 328 aaKnown RBP13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 MISP3Q96FF7 219 aa13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 WDR89Q96FK6 387 aaPredicted RBP13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 ST6GAL2Q96JF0 529 aa13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 UBE2E2Q96LR5 201 aa13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 RNF126Q9BV68 326 aa13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 GAR1Q9NY12 217 aaKnown RBP13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 OR5AC2Q9NZP5 309 aa13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 FBXL7Q9UJT9 491 aa13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 PAIP2BQ9ULR5 123 aaKnown RBP13.23□□□□□ -0.29
SCAMP4-211ENST00000588907 TRAV14DV4A0A0A6YYC5 116 aa13.22□□□□□ -0.29
SCAMP4-211ENST00000588907 TRBV7-1A0A0A6YYK4 115 aa13.22□□□□□ -0.29
SCAMP4-211ENST00000588907 H0YIZ8 118 aa13.22□□□□□ -0.29
SCAMP4-211ENST00000588907 OR2J3O76001 311 aa13.22□□□□□ -0.29
SCAMP4-211ENST00000588907 GPX4P36969 197 aaPredicted RBP13.22□□□□□ -0.29
SCAMP4-211ENST00000588907 SULT1A1P50225 295 aa13.22□□□□□ -0.29
SCAMP4-211ENST00000588907 C15orf32Q32M92 178 aa13.22□□□□□ -0.29
SCAMP4-211ENST00000588907 ETV3LQ6ZN32 361 aa13.22□□□□□ -0.29
SCAMP4-211ENST00000588907 OR10P1Q8NGE3 313 aa13.22□□□□□ -0.29
SCAMP4-211ENST00000588907 EEF1AKMT3Q96AZ1 226 aa13.22□□□□□ -0.29
SCAMP4-211ENST00000588907 MS4A10Q96PG2 267 aa13.22□□□□□ -0.29
SCAMP4-211ENST00000588907 OR4C12Q96R67 309 aa13.22□□□□□ -0.29
SCAMP4-211ENST00000588907 GGACTQ9BVM4 153 aa13.22□□□□□ -0.29
SCAMP4-211ENST00000588907 FNDC10F2Z333 226 aa13.21□□□□□ -0.29
SCAMP4-211ENST00000588907 PRH1P02810 166 aa13.21□□□□□ -0.29
SCAMP4-211ENST00000588907 MFAP2P55001 183 aa13.21□□□□□ -0.29
SCAMP4-211ENST00000588907 TMEM252Q8N6L7 170 aa13.21□□□□□ -0.29
SCAMP4-211ENST00000588907 INO80EQ8NBZ0 244 aaPredicted RBP13.21□□□□□ -0.29
SCAMP4-211ENST00000588907 TMEM170AQ8WVE7 144 aa13.21□□□□□ -0.29
SCAMP4-211ENST00000588907 KLK15Q9H2R5 256 aa13.21□□□□□ -0.29
SCAMP4-211ENST00000588907 DMRT1Q9Y5R6 373 aa13.21□□□□□ -0.29
SCAMP4-211ENST00000588907 TSSC4Q9Y5U2 329 aaPredicted RBP13.21□□□□□ -0.29
SCAMP4-211ENST00000588907 TCRBV4S1A1TA0A5B7 111 aa13.2□□□□□ -0.3
SCAMP4-211ENST00000588907 I3L2K1 104 aa13.2□□□□□ -0.3
SCAMP4-211ENST00000588907 MT-CO2P00403 227 aa13.2□□□□□ -0.3
SCAMP4-211ENST00000588907 RPLP1P05386 114 aaKnown RBP13.2□□□□□ -0.3
SCAMP4-211ENST00000588907 METTL15P1P0C7V9 234 aa13.2□□□□□ -0.3
SCAMP4-211ENST00000588907 S100A11P31949 105 aa13.2□□□□□ -0.3
SCAMP4-211ENST00000588907 FCGR2BP31994 310 aaPredicted RBP13.2□□□□□ -0.3
SCAMP4-211ENST00000588907 CDX1P47902 265 aaPredicted RBP13.2□□□□□ -0.3
SCAMP4-211ENST00000588907 CD69Q07108 199 aa13.2□□□□□ -0.3
SCAMP4-211ENST00000588907 C10orf99Q6UWK7 81 aa13.2□□□□□ -0.3
SCAMP4-211ENST00000588907 C19orf35Q6ZS72 473 aa13.2□□□□□ -0.3
SCAMP4-211ENST00000588907 ZNF491Q8N8L2 437 aa13.2□□□□□ -0.3
SCAMP4-211ENST00000588907 TXN2Q99757 166 aa13.2□□□□□ -0.3
SCAMP4-211ENST00000588907 FXYD6-FXYD2A0A087WZ82 144 aa13.19□□□□□ -0.3
SCAMP4-211ENST00000588907 HMSDA8MTL9 139 aa13.19□□□□□ -0.3
SCAMP4-211ENST00000588907 K7EIM0 57 aa13.19□□□□□ -0.3
SCAMP4-211ENST00000588907 RPL12P30050 165 aaKnown RBP13.19□□□□□ -0.3
SCAMP4-211ENST00000588907 NPBWR1P48145 328 aa13.19□□□□□ -0.3
SCAMP4-211ENST00000588907 DLK1P80370 383 aa13.19□□□□□ -0.3
SCAMP4-211ENST00000588907 EWSR1Q01844 656 aaKnown RBP eCLIP13.19□□□□□ -0.32e-6■■■□□ 17.5
SCAMP4-211ENST00000588907 KHDC1LQ5JSQ8 128 aa13.19□□□□□ -0.3
SCAMP4-211ENST00000588907 ZNF546Q86UE3 836 aa13.19□□□□□ -0.3
SCAMP4-211ENST00000588907 SLC35E1Q96K37 410 aa13.19□□□□□ -0.3
SCAMP4-211ENST00000588907 AQP10Q96PS8 301 aa13.19□□□□□ -0.3
SCAMP4-211ENST00000588907 ZC4H2Q9NQZ6 224 aa13.19□□□□□ -0.3
SCAMP4-211ENST00000588907 C21orf62Q9NYP8 219 aa13.19□□□□□ -0.3
SCAMP4-211ENST00000588907 FAM24AA6NFZ4 105 aa13.18□□□□□ -0.3
SCAMP4-211ENST00000588907 PFDN1O60925 122 aa13.18□□□□□ -0.3
SCAMP4-211ENST00000588907 NDUFB8O95169 186 aa13.18□□□□□ -0.3
SCAMP4-211ENST00000588907 C1QBP02746 253 aa13.18□□□□□ -0.3
SCAMP4-211ENST00000588907 CD28P10747 220 aa13.18□□□□□ -0.3
SCAMP4-211ENST00000588907 MFAP4P55083 255 aa13.18□□□□□ -0.3
SCAMP4-211ENST00000588907 ATP6V1FQ16864 119 aa13.18□□□□□ -0.3
SCAMP4-211ENST00000588907 TCTEX1D4Q5JR98 221 aa13.18□□□□□ -0.3
SCAMP4-211ENST00000588907 OR8G2PQ6IF36 304 aa13.18□□□□□ -0.3
SCAMP4-211ENST00000588907 C12orf54Q6X4T0 127 aa13.18□□□□□ -0.3
SCAMP4-211ENST00000588907 SLC16A13Q7RTY0 426 aa13.18□□□□□ -0.3
SCAMP4-211ENST00000588907 NDUFA11Q86Y39 141 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms