RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 TAS2R60P59551 318 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 CCL8P80075 99 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 DEFA6Q01524 100 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 ZNF90Q03938 601 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 BSPH1Q075Z2 132 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 JOSD1Q15040 202 aaPredicted RBP5.85□□□□□ -1.47
SPIDR-228ENST00000588781 RPEL1Q2QD12 228 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 C4orf17Q53FE4 359 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 FAM201AQ5SY85 155 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 TCF23Q7RTU1 214 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 TGIF2LXQ8IUE1 241 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 TEX45Q8NA69 505 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 OR5T1Q8NG75 326 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 SGMS2Q8NHU3 365 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 LEAP2Q969E1 77 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 NOL4LQ96MY1 436 aaPredicted RBP5.85□□□□□ -1.47
SPIDR-228ENST00000588781 MRPL20Q9BYC9 149 aaKnown RBP5.85□□□□□ -1.47
SPIDR-228ENST00000588781 ZNF430Q9H8G1 570 aaPredicted RBP5.85□□□□□ -1.47
SPIDR-228ENST00000588781 NDUFA4L2Q9NRX3 87 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 FLNCQ14315 2725 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 COL6A6A6NMZ7 2263 aa5.85□□□□□ -1.47
SPIDR-228ENST00000588781 ANKRD17O75179 2603 aaKnown RBP5.84□□□□□ -1.47
SPIDR-228ENST00000588781 A0A087X0M5 115 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 A0A1B0GX30 115 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 SCO2A0A1W2PP80 73 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 COX7A2P2O60397 106 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 OR7C2O60412 319 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 ACTL6BO94805 426 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 OR10J4P0C629 311 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 LINC00869P0C866 280 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 NPPCP23582 126 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 OR10J1P30954 320 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 UCNP55089 124 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 YPEL3P61236 119 aaPredicted RBP5.84□□□□□ -1.47
SPIDR-228ENST00000588781 PAFAH1B2P68402 229 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 HOXA4Q00056 320 aaPredicted RBP5.84□□□□□ -1.47
SPIDR-228ENST00000588781 PSG5Q15238 335 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 IQCJQ1A5X6 159 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 SPRNQ5BIV9 151 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 PYY3Q5JQD4 70 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 GCSAMLQ5JQS6 135 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 TMEM200BQ69YZ2 307 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 TEX38Q6PEX7 206 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 S100A7AQ86SG5 101 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 MMD2Q8IY49 270 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 RPRMLQ8N4K4 120 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 RNASE6Q93091 150 aaKnown RBP5.84□□□□□ -1.47
SPIDR-228ENST00000588781 ABHD17AQ96GS6 310 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 HIST1H2BLQ99880 126 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 RNF5Q99942 180 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 VKORC1Q9BQB6 163 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 PRORYQ9H606 182 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 DNAJC4Q9NNZ3 241 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 OSTCQ9NRP0 149 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 INTS1Q8N201 2190 aaKnown RBP5.84□□□□□ -1.47
SPIDR-228ENST00000588781 HEATR1Q9H583 2144 aaKnown RBP5.84□□□□□ -1.47
SPIDR-228ENST00000588781 MYO9AB2RTY4 2548 aa5.84□□□□□ -1.47
SPIDR-228ENST00000588781 PTPRQQ9UMZ3 2332 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 IGHV1-69-2A0A0G2JMI3 117 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 TCRBV4S1A1TA0A5B7 111 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 IFITM10A6NMD0 228 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 LINC00587B1AMM8 73 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 ERVFC1-1P60608 527 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 RANP62826 216 aaKnown RBP5.83□□□□□ -1.48
SPIDR-228ENST00000588781 PAX2Q02962 417 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 GAMTQ14353 236 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 TMEM155Q4W5P6 130 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 LBHQ53QV2 105 aaPredicted RBP5.83□□□□□ -1.48
SPIDR-228ENST00000588781 PDZD11Q5EBL8 140 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 MIR17HGQ75NE6 70 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 THAP8Q8NA92 274 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 OCC1Q8TAD7 63 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 TMEM37Q8WXS4 190 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 CCL17Q92583 94 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 SMIM12Q96EX1 92 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 PERPQ96FX8 193 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 EAF1Q96JC9 268 aaPredicted RBP5.83□□□□□ -1.48
SPIDR-228ENST00000588781 SRSF8Q9BRL6 282 aaKnown RBP5.83□□□□□ -1.48
SPIDR-228ENST00000588781 ELOVL1Q9BW60 279 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 YTHDF2Q9Y5A9 579 aaKnown RBP5.83□□□□□ -1.48
SPIDR-228ENST00000588781 BOD1L1Q8NFC6 3051 aa5.83□□□□□ -1.48
SPIDR-228ENST00000588781 TANC2Q9HCD6 1990 aa5.82□□□□□ -1.48
SPIDR-228ENST00000588781 USF3Q68DE3 2245 aa5.82□□□□□ -1.48
SPIDR-228ENST00000588781 UTP20O75691 2785 aaKnown RBP5.82□□□□□ -1.48
SPIDR-228ENST00000588781 ISLRO14498 428 aa5.82□□□□□ -1.48
SPIDR-228ENST00000588781 TNFRSF13BO14836 293 aaPredicted RBP5.82□□□□□ -1.48
SPIDR-228ENST00000588781 MMP23AO75900 390 aa5.82□□□□□ -1.48
SPIDR-228ENST00000588781 AMBPP02760 352 aa5.82□□□□□ -1.48
SPIDR-228ENST00000588781 IGKV1-16P04430 117 aa5.82□□□□□ -1.48
SPIDR-228ENST00000588781 THBDP07204 575 aa5.82□□□□□ -1.48
SPIDR-228ENST00000588781 IGHV1-8P0DP01 117 aa5.82□□□□□ -1.48
SPIDR-228ENST00000588781 CHRNB4P30926 498 aa5.82□□□□□ -1.48
SPIDR-228ENST00000588781 RPL27AP46776 148 aaKnown RBP5.82□□□□□ -1.48
SPIDR-228ENST00000588781 TPPP2P59282 170 aa5.82□□□□□ -1.48
SPIDR-228ENST00000588781 RPL15P61313 204 aaKnown RBP5.82□□□□□ -1.48
SPIDR-228ENST00000588781 UBE2L3P68036 154 aaKnown RBP5.82□□□□□ -1.48
SPIDR-228ENST00000588781 TBR1Q16650 682 aa5.82□□□□□ -1.48
SPIDR-228ENST00000588781 C10orf113Q5VZT2 155 aa5.82□□□□□ -1.48
SPIDR-228ENST00000588781 DUX4L9Q6RFH8 374 aaPredicted RBP5.82□□□□□ -1.48
SPIDR-228ENST00000588781 RASL11AQ6T310 242 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms