RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 FXYD3Q14802 87 aa13.15□□□□□ -0.3
NFIX-210ENST00000588228 MIC13Q5XKP0 118 aa13.15□□□□□ -0.3
NFIX-210ENST00000588228 ETFRF1Q6IPR1 90 aa13.15□□□□□ -0.3
NFIX-210ENST00000588228 FAM122CQ6P4D5 195 aa13.15□□□□□ -0.3
NFIX-210ENST00000588228 SSMEM1Q8WWF3 244 aa13.15□□□□□ -0.3
NFIX-210ENST00000588228 FNDC4Q9H6D8 234 aaPredicted RBP13.15□□□□□ -0.3
NFIX-210ENST00000588228 C7orf69Q9H7B7 122 aa13.15□□□□□ -0.3
NFIX-210ENST00000588228 SLC25A22Q9H936 323 aa13.15□□□□□ -0.3
NFIX-210ENST00000588228 CARHSP1Q9Y2V2 147 aaKnown RBP13.15□□□□□ -0.3
NFIX-210ENST00000588228 PRR20EP86478 221 aa13.15□□□□□ -0.31
NFIX-210ENST00000588228 PRR20CP86479 221 aa13.15□□□□□ -0.31
NFIX-210ENST00000588228 PRR20DP86480 221 aa13.15□□□□□ -0.31
NFIX-210ENST00000588228 PRR20BP86481 221 aa13.15□□□□□ -0.31
NFIX-210ENST00000588228 PRR20AP86496 221 aa13.15□□□□□ -0.31
NFIX-210ENST00000588228 FAM120AOSQ5T036 256 aa13.15□□□□□ -0.31
NFIX-210ENST00000588228 ZNF562Q6V9R5 426 aa13.15□□□□□ -0.31
NFIX-210ENST00000588228 STPG3Q8N7X2 389 aa13.15□□□□□ -0.31
NFIX-210ENST00000588228 LINC01356Q8N9X3 169 aa13.15□□□□□ -0.31
NFIX-210ENST00000588228 HIF1ANQ9NWT6 349 aa13.15□□□□□ -0.31
NFIX-210ENST00000588228 SLC45A2Q9UMX9 530 aa13.15□□□□□ -0.31
NFIX-210ENST00000588228 FAM208BQ5VWN6 2430 aa13.14□□□□□ -0.31
NFIX-210ENST00000588228 LRRK2Q5S007 2527 aa13.14□□□□□ -0.31
NFIX-210ENST00000588228 IGKV1OR2-108A0A075B7D4 117 aa13.14□□□□□ -0.31
NFIX-210ENST00000588228 TSPAN9O75954 239 aa13.14□□□□□ -0.31
NFIX-210ENST00000588228 APELAP0DMC3 54 aa13.14□□□□□ -0.31
NFIX-210ENST00000588228 CDC34P49427 236 aaPredicted RBP13.14□□□□□ -0.31
NFIX-210ENST00000588228 MFAP2P55001 183 aa13.14□□□□□ -0.31
NFIX-210ENST00000588228 FGF8P55075 233 aaPredicted RBP13.14□□□□□ -0.31
NFIX-210ENST00000588228 LOXL1Q08397 574 aaPredicted RBP13.14□□□□□ -0.31
NFIX-210ENST00000588228 PMS2P11Q13670 270 aa13.14□□□□□ -0.31
NFIX-210ENST00000588228 ZNF506Q5JVG8 444 aa13.14□□□□□ -0.31
NFIX-210ENST00000588228 RUSC1-AS1Q66K80 236 aa13.14□□□□□ -0.31
NFIX-210ENST00000588228 OR2T6Q8NHC8 308 aa13.14□□□□□ -0.31
NFIX-210ENST00000588228 ABHD5Q8WTS1 349 aa13.14□□□□□ -0.31
NFIX-210ENST00000588228 RAB24Q969Q5 203 aa13.14□□□□□ -0.31
NFIX-210ENST00000588228 PSMG3-AS1Q96PY0 264 aa13.14□□□□□ -0.31
NFIX-210ENST00000588228 FBN2P35556 2912 aa13.13□□□□□ -0.31
NFIX-210ENST00000588228 CRYGCP07315 174 aa13.13□□□□□ -0.31
NFIX-210ENST00000588228 PPT1P50897 306 aa13.13□□□□□ -0.31
NFIX-210ENST00000588228 HAGHQ16775 308 aa13.13□□□□□ -0.31
NFIX-210ENST00000588228 GCSAMLQ5JQS6 135 aa13.13□□□□□ -0.31
NFIX-210ENST00000588228 Q8N9W7 124 aa13.13□□□□□ -0.31
NFIX-210ENST00000588228 MISP3Q96FF7 219 aa13.13□□□□□ -0.31
NFIX-210ENST00000588228 ACY3Q96HD9 319 aa13.13□□□□□ -0.31
NFIX-210ENST00000588228 RARRES2Q99969 163 aa13.13□□□□□ -0.31
NFIX-210ENST00000588228 UTP20O75691 2785 aaKnown RBP13.13□□□□□ -0.31
NFIX-210ENST00000588228 TACC2O95359 2948 aa13.13□□□□□ -0.31
NFIX-210ENST00000588228 IGHV3OR16-10A0A075B7F0 116 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 A0A1W2PPV4 95 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 CTRB1P17538 263 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 OR10J1P30954 320 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 CX3CL1P78423 397 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 DEFA5Q01523 94 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 KHDC3LQ587J8 217 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 CTRB2Q6GPI1 263 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 OR1L6Q8NGR2 347 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 ARPC1AQ92747 370 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 MBD6Q96DN6 1003 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 SLC35B3Q9H1N7 401 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 GNG13Q9P2W3 67 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 LOC102723971A0A1B0GUV8 181 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 HSPB1P04792 205 aaKnown RBP13.12□□□□□ -0.31
NFIX-210ENST00000588228 LINC00869P0C866 280 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 IGHV4-38-2P0DP08 117 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 ICAM4Q14773 271 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 TMEM249Q2WGJ8 235 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 SVBPQ8N300 66 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 THAP8Q8NA92 274 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 NPIPB3Q92617 1050 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 MEGF9Q9H1U4 602 aa13.12□□□□□ -0.31
NFIX-210ENST00000588228 ASH1LQ9NR48 2969 aaKnown RBP13.11□□□□□ -0.31
NFIX-210ENST00000588228 EIF3GO75821 320 aaKnown RBP eCLIP13.11□□□□□ -0.31
NFIX-210ENST00000588228 IFNA1P01562 189 aa13.11□□□□□ -0.31
NFIX-210ENST00000588228 HLA-DRB1P01911 266 aa13.11□□□□□ -0.31
NFIX-210ENST00000588228 BCL2P10415 239 aa13.11□□□□□ -0.31
NFIX-210ENST00000588228 Q5PR19 223 aa13.11□□□□□ -0.31
NFIX-210ENST00000588228 BRD3OSQ6XYD6 125 aa13.11□□□□□ -0.31
NFIX-210ENST00000588228 C19orf35Q6ZS72 473 aa13.11□□□□□ -0.31
NFIX-210ENST00000588228 C22orf15Q8WYQ4 148 aa13.11□□□□□ -0.31
NFIX-210ENST00000588228 WNT10AQ9GZT5 417 aa13.11□□□□□ -0.31
NFIX-210ENST00000588228 J3QLI3 93 aa13.1□□□□□ -0.31
NFIX-210ENST00000588228 HMGB3O15347 200 aaKnown RBP13.1□□□□□ -0.31
NFIX-210ENST00000588228 SCO1O75880 301 aa13.1□□□□□ -0.31
NFIX-210ENST00000588228 DEFA4P12838 97 aa13.1□□□□□ -0.31
NFIX-210ENST00000588228 RND2P52198 227 aa13.1□□□□□ -0.31
NFIX-210ENST00000588228 PRSS57Q6UWY2 283 aa13.1□□□□□ -0.31
NFIX-210ENST00000588228 RBMS3Q6XE24 437 aaKnown RBP13.1□□□□□ -0.31
NFIX-210ENST00000588228 CYP2G1PQ6ZSU1 146 aa13.1□□□□□ -0.31
NFIX-210ENST00000588228 RASL11BQ9BPW5 248 aa13.1□□□□□ -0.31
NFIX-210ENST00000588228 SLC25A33Q9BSK2 321 aa13.1□□□□□ -0.31
NFIX-210ENST00000588228 FAM103A1Q9BTL3 118 aaKnown RBP13.1□□□□□ -0.31
NFIX-210ENST00000588228 DMRT1Q9Y5R6 373 aa13.1□□□□□ -0.31
NFIX-210ENST00000588228 IGHV7-81A0A0B4J1V7 117 aa13.09□□□□□ -0.31
NFIX-210ENST00000588228 A0A0U1RQK1 487 aa13.09□□□□□ -0.31
NFIX-210ENST00000588228 ZFP92A6NM28 416 aa13.09□□□□□ -0.31
NFIX-210ENST00000588228 NPIPB5A8MRT5 1133 aa13.09□□□□□ -0.31
NFIX-210ENST00000588228 MT-CO2P00403 227 aa13.09□□□□□ -0.31
NFIX-210ENST00000588228 RHOBP62745 196 aa13.09□□□□□ -0.31
NFIX-210ENST00000588228 NDPQ00604 133 aa13.09□□□□□ -0.31
NFIX-210ENST00000588228 TMEM116Q8NCL8 245 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms