RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 SURF2Q15527 256 aaPredicted RBP13.29□□□□□ -0.28
TPM4-206ENST00000587201 OR52B4Q8NGK2 314 aa13.29□□□□□ -0.28
TPM4-206ENST00000587201 MCFD2Q8NI22 146 aa13.29□□□□□ -0.28
TPM4-206ENST00000587201 MUC7Q8TAX7 377 aa13.29□□□□□ -0.28
TPM4-206ENST00000587201 PINX1Q96BK5 328 aaKnown RBP13.29□□□□□ -0.28
TPM4-206ENST00000587201 RTBDNQ9BSG5 229 aaPredicted RBP13.29□□□□□ -0.28
TPM4-206ENST00000587201 DAZ1Q9NQZ3 744 aaKnown RBP13.29□□□□□ -0.28
TPM4-206ENST00000587201 TRAV25A0A0B4J276 109 aa13.28□□□□□ -0.28
TPM4-206ENST00000587201 I3L2K1 104 aa13.28□□□□□ -0.28
TPM4-206ENST00000587201 NUPL2O15504 423 aaKnown RBP13.28□□□□□ -0.28
TPM4-206ENST00000587201 GSTZ1O43708 216 aaPredicted RBP13.28□□□□□ -0.28
TPM4-206ENST00000587201 OR5AC1P0C628 307 aa13.28□□□□□ -0.28
TPM4-206ENST00000587201 TNFSF8P32971 234 aa13.28□□□□□ -0.28
TPM4-206ENST00000587201 SNCAP37840 140 aa13.28□□□□□ -0.28
TPM4-206ENST00000587201 ANKRD55Q3KP44 614 aa13.28□□□□□ -0.28
TPM4-206ENST00000587201 LINC00322Q6ZN03 302 aaPredicted RBP13.28□□□□□ -0.28
TPM4-206ENST00000587201 CITED4Q96RK1 184 aa13.28□□□□□ -0.28
TPM4-206ENST00000587201 PRRT1Q99946 306 aa13.28□□□□□ -0.28
TPM4-206ENST00000587201 C5orf66Q9H5L9 145 aa13.28□□□□□ -0.28
TPM4-206ENST00000587201 NAA60Q9H7X0 242 aa13.28□□□□□ -0.28
TPM4-206ENST00000587201 DNAH7Q8WXX0 4024 aa13.27□□□□□ -0.28
TPM4-206ENST00000587201 IGHV3OR16-8A0A075B7F1 116 aa13.27□□□□□ -0.29
TPM4-206ENST00000587201 A0A0G2JRQ6 117 aa13.27□□□□□ -0.29
TPM4-206ENST00000587201 ANKRD20A5PA0PJZ0 165 aa13.27□□□□□ -0.29
TPM4-206ENST00000587201 FABP12A6NFH5 140 aa13.27□□□□□ -0.29
TPM4-206ENST00000587201 ZNF207O43670 478 aaKnown RBP13.27□□□□□ -0.29
TPM4-206ENST00000587201 IGHV3-48P01763 117 aa13.27□□□□□ -0.29
TPM4-206ENST00000587201 CTSGP08311 255 aa13.27□□□□□ -0.29
TPM4-206ENST00000587201 HOXA1P49639 335 aaPredicted RBP13.27□□□□□ -0.29
TPM4-206ENST00000587201 RELQ04864 619 aaPredicted RBP13.27□□□□□ -0.29
TPM4-206ENST00000587201 OR51S1Q8NGJ8 323 aa13.27□□□□□ -0.29
TPM4-206ENST00000587201 TXN2Q99757 166 aa13.27□□□□□ -0.29
TPM4-206ENST00000587201 TMEM222Q9H0R3 208 aa13.27□□□□□ -0.29
TPM4-206ENST00000587201 ENY2Q9NPA8 101 aa13.27□□□□□ -0.29
TPM4-206ENST00000587201 GPR132Q9UNW8 380 aa13.27□□□□□ -0.29
TPM4-206ENST00000587201 RBMY1BA6NDE4 496 aaKnown RBP13.26□□□□□ -0.29
TPM4-206ENST00000587201 RBMY1EA6NEQ0 496 aaKnown RBP13.26□□□□□ -0.29
TPM4-206ENST00000587201 CCDC160A6NGH7 325 aa13.26□□□□□ -0.29
TPM4-206ENST00000587201 K7EMT4 169 aa13.26□□□□□ -0.29
TPM4-206ENST00000587201 GNG7O60262 68 aa13.26□□□□□ -0.29
TPM4-206ENST00000587201 CDS2O95674 445 aa13.26□□□□□ -0.29
TPM4-206ENST00000587201 RBMY1DP0C7P1 496 aaKnown RBP13.26□□□□□ -0.29
TPM4-206ENST00000587201 FCGR2BP31994 310 aaPredicted RBP13.26□□□□□ -0.29
TPM4-206ENST00000587201 ETV6P41212 452 aa13.26□□□□□ -0.29
TPM4-206ENST00000587201 DHODHQ02127 395 aa13.26□□□□□ -0.29
TPM4-206ENST00000587201 FAM219AQ8IW50 185 aa13.26□□□□□ -0.29
TPM4-206ENST00000587201 GLYATL2Q8WU03 294 aa13.26□□□□□ -0.29
TPM4-206ENST00000587201 NXF2Q9GZY0 626 aaKnown RBP13.26□□□□□ -0.29
TPM4-206ENST00000587201 SCP2D1Q9UJQ7 156 aa13.26□□□□□ -0.29
TPM4-206ENST00000587201 CRYM-AS1A6NIL9 109 aa13.25□□□□□ -0.29
TPM4-206ENST00000587201 INS-IGF2F8WCM5 200 aa13.25□□□□□ -0.29
TPM4-206ENST00000587201 YIF1AO95070 293 aa13.25□□□□□ -0.29
TPM4-206ENST00000587201 SUB1P53999 127 aaKnown RBP eCLIP13.25□□□□□ -0.29
TPM4-206ENST00000587201 LAMTOR1Q6IAA8 161 aa13.25□□□□□ -0.29
TPM4-206ENST00000587201 RBPMSQ93062 196 aaKnown RBP13.25□□□□□ -0.29
TPM4-206ENST00000587201 SOSTQ9BQB4 213 aa13.25□□□□□ -0.29
TPM4-206ENST00000587201 RETNQ9HD89 108 aa13.25□□□□□ -0.29
TPM4-206ENST00000587201 MCUBQ9NWR8 336 aa13.25□□□□□ -0.29
TPM4-206ENST00000587201 C15orf62A8K5M9 175 aa13.24□□□□□ -0.29
TPM4-206ENST00000587201 Q6ZRM9 215 aa13.24□□□□□ -0.29
TPM4-206ENST00000587201 SELENOHQ8IZQ5 122 aaKnown RBP13.24□□□□□ -0.29
TPM4-206ENST00000587201 DUSP18Q8NEJ0 188 aa13.24□□□□□ -0.29
TPM4-206ENST00000587201 LHFPL5Q8TAF8 219 aa13.24□□□□□ -0.29
TPM4-206ENST00000587201 SCGB3A2Q96PL1 93 aa13.24□□□□□ -0.29
TPM4-206ENST00000587201 SPAG8Q99932 426 aaPredicted RBP13.24□□□□□ -0.29
TPM4-206ENST00000587201 HIPK2Q9H2X6 1198 aa13.24□□□□□ -0.29
TPM4-206ENST00000587201 EDA2RQ9HAV5 297 aa13.24□□□□□ -0.29
TPM4-206ENST00000587201 CORTO00230 105 aa13.23□□□□□ -0.29
TPM4-206ENST00000587201 TSPAN4O14817 238 aa13.23□□□□□ -0.29
TPM4-206ENST00000587201 RNASE2P10153 161 aaKnown RBP13.23□□□□□ -0.29
TPM4-206ENST00000587201 LYL1P12980 280 aa13.23□□□□□ -0.29
TPM4-206ENST00000587201 NPBWR1P48145 328 aa13.23□□□□□ -0.29
TPM4-206ENST00000587201 CASC10Q5T4H9 136 aa13.23□□□□□ -0.29
TPM4-206ENST00000587201 TMEM268Q5VZI3 342 aa13.23□□□□□ -0.29
TPM4-206ENST00000587201 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.23□□□□□ -0.29
TPM4-206ENST00000587201 KCNIP3Q9Y2W7 256 aa13.23□□□□□ -0.29
TPM4-206ENST00000587201 SPCS3P61009 180 aa13.22□□□□□ -0.29
TPM4-206ENST00000587201 PYDC2Q56P42 97 aa13.22□□□□□ -0.29
TPM4-206ENST00000587201 GPR146Q96CH1 333 aa13.22□□□□□ -0.29
TPM4-206ENST00000587201 ZNF414Q96IQ9 312 aa13.22□□□□□ -0.29
TPM4-206ENST00000587201 FAM110AQ9BQ89 295 aa13.22□□□□□ -0.29
TPM4-206ENST00000587201 CACNG5Q9UF02 275 aa13.22□□□□□ -0.29
TPM4-206ENST00000587201 SMPXQ9UHP9 88 aa13.22□□□□□ -0.29
TPM4-206ENST00000587201 IGHV7-4-1A0A0J9YVY3 117 aa13.21□□□□□ -0.29
TPM4-206ENST00000587201 S100A5P33763 92 aa13.21□□□□□ -0.29
TPM4-206ENST00000587201 PVRIGQ6DKI7 326 aa13.21□□□□□ -0.29
TPM4-206ENST00000587201 TMEM116Q8NCL8 245 aa13.21□□□□□ -0.29
TPM4-206ENST00000587201 OR52E5Q8NH55 327 aa13.21□□□□□ -0.29
TPM4-206ENST00000587201 OR10C1Q96KK4 312 aa13.21□□□□□ -0.29
TPM4-206ENST00000587201 RHPN1-AS1Q9BWJ2 59 aa13.21□□□□□ -0.29
TPM4-206ENST00000587201 UBQLN2Q9UHD9 624 aa13.21□□□□□ -0.29
TPM4-206ENST00000587201 TMEM56-RWDD3S4R434 201 aa13.21□□□□□ -0.29
TPM4-206ENST00000587201 LOC102724200A0A096LPH7 203 aaPredicted RBP13.2□□□□□ -0.3
TPM4-206ENST00000587201 IGHV3-49A0A0A0MS15 119 aa13.2□□□□□ -0.3
TPM4-206ENST00000587201 TRAV14DV4A0A0A6YYC5 116 aa13.2□□□□□ -0.3
TPM4-206ENST00000587201 CHEK1O14757 476 aa13.2□□□□□ -0.3
TPM4-206ENST00000587201 AKR1C4P17516 323 aa13.2□□□□□ -0.3
TPM4-206ENST00000587201 FAUP35544 74 aaKnown RBP13.2□□□□□ -0.3
TPM4-206ENST00000587201 OPRK1P41145 380 aa13.2□□□□□ -0.3
TPM4-206ENST00000587201 TMEM187Q14656 261 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms