RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 TIMM23O14925 209 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 SFTPCP11686 197 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 PRCDQ00LT1 54 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 ZNF705GA8MUZ8 300 aaPredicted RBP10.13□□□□□ -0.79
SMARCA4-208ENST00000585799 FOXH1O75593 365 aa10.13□□□□□ -0.79
SMARCA4-208ENST00000585799 SOD3P08294 240 aa10.13□□□□□ -0.79
SMARCA4-208ENST00000585799 GNG4P50150 75 aa10.13□□□□□ -0.79
SMARCA4-208ENST00000585799 ECSCRQ19T08 205 aa10.13□□□□□ -0.79
SMARCA4-208ENST00000585799 PDPNQ86YL7 162 aa10.13□□□□□ -0.79
SMARCA4-208ENST00000585799 TRBV23-1A0A0A0MS06 115 aa10.13□□□□□ -0.79
SMARCA4-208ENST00000585799 TRAV5A0A0B4J249 113 aa10.13□□□□□ -0.79
SMARCA4-208ENST00000585799 IGHV3-23P01764 117 aa10.13□□□□□ -0.79
SMARCA4-208ENST00000585799 Q8WTZ3 238 aa10.13□□□□□ -0.79
SMARCA4-208ENST00000585799 TOLLIPQ9H0E2 274 aa10.13□□□□□ -0.79
SMARCA4-208ENST00000585799 CDSNQ15517 529 aa10.13□□□□□ -0.79
SMARCA4-208ENST00000585799 OR2T10Q8NGZ9 312 aa10.13□□□□□ -0.79
SMARCA4-208ENST00000585799 FAM222BQ8WU58 562 aa10.13□□□□□ -0.79
SMARCA4-208ENST00000585799 TMEM11P17152 192 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 VDAC2P45880 294 aaPredicted RBP10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 ADORA2A-AS1P86434 159 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 DPM3Q9P2X0 92 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 FOXA2Q9Y261 457 aaPredicted RBP10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 USP9XQ93008 2570 aaPredicted RBP10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 LGALS7P47929 136 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 EFNB3Q15768 340 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 TMEM30BQ3MIR4 351 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 KLF17Q5JT82 389 aaPredicted RBP10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 LEMD1Q68G75 181 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 TCF23Q7RTU1 214 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 PFDN5Q99471 154 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 HELTA6NFD8 242 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 CLN5O75503 358 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 TMEM155Q4W5P6 130 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 OR10G8Q8NGN5 311 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 OR10D4PQ8NGN7 298 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 SGMS2Q8NHU3 365 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 DAZAP1Q96EP5 407 aaKnown RBP10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 P2RX4Q99571 388 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 SLC25A33Q9BSK2 321 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 PAXXQ9BUH6 204 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 ELOVL1Q9BW60 279 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 SDF2L1Q9HCN8 221 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 DNAJC4Q9NNZ3 241 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 TMEM167BQ9NRX6 74 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 FUT9Q9Y231 359 aa10.12□□□□□ -0.79
SMARCA4-208ENST00000585799 NAV2Q8IVL1 2488 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 FABP4P15090 132 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 AREGP15514 252 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 FXYD3Q14802 87 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 HLA-DRB5Q30154 266 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 PTPRBP23467 1997 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 AP4M1O00189 453 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 PDE6DO43924 150 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 CD81P60033 236 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 GAMTQ14353 236 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 ETFRF1Q6IPR1 90 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 OR52E5Q8NH55 327 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 ASPMQ8IZT6 3477 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 TRAV34A0A0B4J273 112 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 GNG7O60262 68 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 CXCL1P09341 107 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 PYYP10082 97 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 CNN1P51911 297 aaKnown RBP10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 RPL23P62829 140 aaKnown RBP10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 TMEM144Q7Z5S9 345 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 EAF1Q96JC9 268 aaPredicted RBP10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 RASL11BQ9BPW5 248 aa10.11□□□□□ -0.79
SMARCA4-208ENST00000585799 CD69Q07108 199 aa10.1□□□□□ -0.79
SMARCA4-208ENST00000585799 FAM90A2PQ658T7 463 aa10.1□□□□□ -0.79
SMARCA4-208ENST00000585799 PQLC2Q6ZP29 291 aa10.1□□□□□ -0.79
SMARCA4-208ENST00000585799 OR1L4Q8NGR5 311 aa10.1□□□□□ -0.79
SMARCA4-208ENST00000585799 BET1LQ9NYM9 111 aa10.1□□□□□ -0.79
SMARCA4-208ENST00000585799 SONP18583 2426 aaKnown RBP10.1□□□□□ -0.79
SMARCA4-208ENST00000585799 B4DEV8 164 aa10.1□□□□□ -0.79
SMARCA4-208ENST00000585799 C8orf88P0DMB2 117 aa10.1□□□□□ -0.79
SMARCA4-208ENST00000585799 CYP2G1PQ6ZSU1 146 aa10.1□□□□□ -0.79
SMARCA4-208ENST00000585799 PPP1R27Q86WC6 154 aa10.1□□□□□ -0.79
SMARCA4-208ENST00000585799 IGHV1-3A0A0C4DH29 117 aa10.1□□□□□ -0.79
SMARCA4-208ENST00000585799 SLC17A3O00476 420 aa10.1□□□□□ -0.79
SMARCA4-208ENST00000585799 OR5I1Q13606 314 aa10.1□□□□□ -0.79
SMARCA4-208ENST00000585799 SRSF12Q8WXF0 261 aaKnown RBP10.1□□□□□ -0.79
SMARCA4-208ENST00000585799 RITA1Q96K30 269 aa10.1□□□□□ -0.79
SMARCA4-208ENST00000585799 TMEM14BQ9NUH8 114 aa10.1□□□□□ -0.79
SMARCA4-208ENST00000585799 GGACTQ9BVM4 153 aa10.09□□□□□ -0.79
SMARCA4-208ENST00000585799 TRAPPC1Q9Y5R8 145 aa10.09□□□□□ -0.79
SMARCA4-208ENST00000585799 TMEM250H0YL14 139 aa10.09□□□□□ -0.79
SMARCA4-208ENST00000585799 RNASE2P10153 161 aaKnown RBP10.09□□□□□ -0.79
SMARCA4-208ENST00000585799 ATP5J2P56134 94 aa10.09□□□□□ -0.79
SMARCA4-208ENST00000585799 HABP2Q14520 560 aaPredicted RBP10.09□□□□□ -0.79
SMARCA4-208ENST00000585799 MRPL54Q6P161 138 aaKnown RBP10.09□□□□□ -0.79
SMARCA4-208ENST00000585799 TRAV1-1A0A0B4J248 108 aa10.09□□□□□ -0.79
SMARCA4-208ENST00000585799 C22orf46C9J442 243 aa10.09□□□□□ -0.79
SMARCA4-208ENST00000585799 BAGE3Q86Y29 109 aa10.09□□□□□ -0.79
SMARCA4-208ENST00000585799 BAGE2Q86Y30 109 aa10.09□□□□□ -0.79
SMARCA4-208ENST00000585799 ZNF439Q8NDP4 499 aa10.09□□□□□ -0.79
SMARCA4-208ENST00000585799 LYPD6BQ8NI32 183 aa10.09□□□□□ -0.79
SMARCA4-208ENST00000585799 NEU4Q8WWR8 484 aaPredicted RBP10.09□□□□□ -0.79
SMARCA4-208ENST00000585799 RBM14Q96PK6 669 aaKnown RBP10.09□□□□□ -0.79
SMARCA4-208ENST00000585799 IGHV3OR16-13A0A075B7E8 117 aa10.08□□□□□ -0.8
SMARCA4-208ENST00000585799 IGHV3-74A0A0B4J1X5 117 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms