RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 PRR20EP86478 221 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 PRR20CP86479 221 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 PRR20DP86480 221 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 PRR20BP86481 221 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 PRR20AP86496 221 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 RNF212Q495C1 297 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 CCDC144NLQ6NUI1 221 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 IQCF2Q8IXL9 164 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 ZNF114Q8NC26 417 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 C1orf159Q96HA4 380 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 SRSF8Q9BRL6 282 aaKnown RBP9.07□□□□□ -0.96
LIG3-204ENST00000585740 C20orf24Q9BUV8 137 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 SLC45A2Q9UMX9 530 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 SIGLEC9Q9Y336 463 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 ARL2-SNX15V9GYD0 113 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 IGHV3-72A0A0B4J1Y9 119 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 A0A1W2PPI3 338 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 A0A1W2PPR1 153 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 ZNF727A8MUV8 499 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 ODF3BA8MYP8 253 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 HMGB3O15347 200 aaKnown RBP9.06□□□□□ -0.96
LIG3-204ENST00000585740 CDKN1AP38936 164 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 CD81P60033 236 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 ARF6P62330 175 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 PAX2Q02962 417 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 GAMTQ14353 236 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 MINOS1Q5TGZ0 78 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 OR10W1Q8NGF6 305 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 SSMEM1Q8WWF3 244 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 C22orf15Q8WYQ4 148 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 CTDSP1Q9GZU7 261 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 TMPRSS5Q9H3S3 457 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 MLXQ9UH92 298 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 NAT8Q9UHE5 227 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 MINOS1-NBL1R4GNA1 71 aa9.06□□□□□ -0.96
LIG3-204ENST00000585740 CGB1A6NKQ9 187 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 C19orf84I3L1E1 186 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 PAGE4O60829 102 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 CLN5O75503 358 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 OR2C1O95371 312 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 IGHV2-5P01817 119 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 LINC00869P0C866 280 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 OR10J1P30954 320 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 TAS2R45P59539 299 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 SELENOTP62341 195 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 WT1-ASQ06250 92 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 TNXAQ16473 311 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 PVRIGQ6DKI7 326 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 SPNS3Q6ZMD2 512 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 CYP2G1PQ6ZSU1 146 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 PPP1R27Q86WC6 154 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 THAP8Q8NA92 274 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 OR4F5Q8NH21 305 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 OR4F4Q96R69 305 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 SMIM7Q9BQ49 75 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 MRPL32Q9BYC8 188 aaKnown RBP9.05□□□□□ -0.96
LIG3-204ENST00000585740 SDF2L1Q9HCN8 221 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 TMEM242Q9NWH2 141 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 METTL1Q9UBP6 276 aaKnown RBP9.05□□□□□ -0.96
LIG3-204ENST00000585740 ZFHX3Q15911 3703 aa9.05□□□□□ -0.96
LIG3-204ENST00000585740 SETD2Q9BYW2 2564 aaPredicted RBP9.05□□□□□ -0.96
LIG3-204ENST00000585740 F8P00451 2351 aa9.04□□□□□ -0.96
LIG3-204ENST00000585740 C11orf94C9JXX5 98 aa9.04□□□□□ -0.96
LIG3-204ENST00000585740 OVOL3O00110 214 aa9.04□□□□□ -0.96
LIG3-204ENST00000585740 VENTXO95231 258 aa9.04□□□□□ -0.96
LIG3-204ENST00000585740 AKR1C3P42330 323 aa9.04□□□□□ -0.96
LIG3-204ENST00000585740 PDLIM4P50479 330 aa9.04□□□□□ -0.96
LIG3-204ENST00000585740 HABP2Q14520 560 aaPredicted RBP9.04□□□□□ -0.96
LIG3-204ENST00000585740 TMEM241Q24JQ0 296 aa9.04□□□□□ -0.96
LIG3-204ENST00000585740 MRGPRG-AS1Q2M3A8 158 aa9.04□□□□□ -0.96
LIG3-204ENST00000585740 GCSAMLQ5JQS6 135 aa9.04□□□□□ -0.96
LIG3-204ENST00000585740 OR1L4Q8NGR5 311 aa9.04□□□□□ -0.96
LIG3-204ENST00000585740 OR1P1Q8NH06 330 aa9.04□□□□□ -0.96
LIG3-204ENST00000585740 HIST1H2BAQ96A08 127 aa9.04□□□□□ -0.96
LIG3-204ENST00000585740 TPSG1Q9NRR2 321 aa9.04□□□□□ -0.96
LIG3-204ENST00000585740 TMEM167BQ9NRX6 74 aa9.04□□□□□ -0.96
LIG3-204ENST00000585740 TECRQ9NZ01 308 aaKnown RBP9.04□□□□□ -0.96
LIG3-204ENST00000585740 FUT9Q9Y231 359 aa9.04□□□□□ -0.96
LIG3-204ENST00000585740 ADGRG4Q8IZF6 3080 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 IGHV2-70DA0A0C4DH43 119 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 IGLC7A0M8Q6 106 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 C1orf196B1AJZ1 125 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 E7EUB6 86 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 TIMM23O14925 209 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 FOXH1O75593 365 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 MOSP00540 346 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 OR5G3P0C626 314 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 ARL14EPLP0DKL9 152 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 GCHFRP30047 84 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 LGALS4P56470 323 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 RAB5BP61020 215 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 PLGLAQ15195 96 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 SSX2Q16385 188 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 C10orf55Q5SWW7 151 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 HCP5Q6MZN7 132 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 PQLC2Q6ZP29 291 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 NPBQ8NG41 125 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 OR1L6Q8NGR2 347 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 OR2T10Q8NGZ9 312 aa9.03□□□□□ -0.96
LIG3-204ENST00000585740 ABHD5Q8WTS1 349 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms