RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 CTSDP07339 412 aaPredicted RBP9.35□□□□□ -0.91
SS18-225ENST00000585121 AKAIN1P0CW23 69 aa9.35□□□□□ -0.91
SS18-225ENST00000585121 PRCDQ00LT1 54 aa9.35□□□□□ -0.91
SS18-225ENST00000585121 KLF9Q13886 244 aaPredicted RBP9.35□□□□□ -0.91
SS18-225ENST00000585121 ANKRD55Q3KP44 614 aa9.35□□□□□ -0.91
SS18-225ENST00000585121 TM4SF20Q53R12 229 aa9.35□□□□□ -0.91
SS18-225ENST00000585121 RBPMS2Q6ZRY4 209 aaKnown RBP9.35□□□□□ -0.91
SS18-225ENST00000585121 NRARPQ7Z6K4 114 aa9.35□□□□□ -0.91
SS18-225ENST00000585121 OR2C3Q8N628 320 aa9.35□□□□□ -0.91
SS18-225ENST00000585121 OR13C8Q8NGS7 320 aa9.35□□□□□ -0.91
SS18-225ENST00000585121 MARCH1Q8TCQ1 289 aa9.35□□□□□ -0.91
SS18-225ENST00000585121 CACNG8Q8WXS5 425 aa9.35□□□□□ -0.91
SS18-225ENST00000585121 MISP3Q96FF7 219 aa9.35□□□□□ -0.91
SS18-225ENST00000585121 TP53RKQ96S44 253 aa9.35□□□□□ -0.91
SS18-225ENST00000585121 SPATA25Q9BR10 227 aa9.35□□□□□ -0.91
SS18-225ENST00000585121 TM2D3Q9BRN9 247 aa9.35□□□□□ -0.91
SS18-225ENST00000585121 ZNF436Q9C0F3 470 aaPredicted RBP9.35□□□□□ -0.91
SS18-225ENST00000585121 MRPL27Q9P0M9 148 aaKnown RBP9.35□□□□□ -0.91
SS18-225ENST00000585121 FAM240BA0A1B0GVZ2 78 aa9.34□□□□□ -0.91
SS18-225ENST00000585121 IFNA17P01571 189 aa9.34□□□□□ -0.91
SS18-225ENST00000585121 MFAP2P55001 183 aa9.34□□□□□ -0.91
SS18-225ENST00000585121 MFAP4P55083 255 aa9.34□□□□□ -0.91
SS18-225ENST00000585121 UNQ9165/PRO28630Q6UXU0 137 aa9.34□□□□□ -0.91
SS18-225ENST00000585121 SLC35G3Q8N808 338 aa9.34□□□□□ -0.91
SS18-225ENST00000585121 ENKURQ8TC29 256 aa9.34□□□□□ -0.91
SS18-225ENST00000585121 SCARB1Q8WTV0 552 aa9.34□□□□□ -0.91
SS18-225ENST00000585121 WDR89Q96FK6 387 aaPredicted RBP9.34□□□□□ -0.91
SS18-225ENST00000585121 ENY2Q9NPA8 101 aa9.34□□□□□ -0.91
SS18-225ENST00000585121 DNAH7Q8WXX0 4024 aa9.33□□□□□ -0.92
SS18-225ENST00000585121 TRAV25A0A0B4J276 109 aa9.33□□□□□ -0.92
SS18-225ENST00000585121 TEX13DA0A0J9YY54 714 aaPredicted RBP9.33□□□□□ -0.92
SS18-225ENST00000585121 A0A1B0GVG6 124 aa9.33□□□□□ -0.92
SS18-225ENST00000585121 OR11H12B2RN74 326 aa9.33□□□□□ -0.92
SS18-225ENST00000585121 K7EIM0 57 aa9.33□□□□□ -0.92
SS18-225ENST00000585121 NDUFA4O00483 81 aa9.33□□□□□ -0.92
SS18-225ENST00000585121 NUPL2O15504 423 aaKnown RBP9.33□□□□□ -0.92
SS18-225ENST00000585121 EDN2P20800 178 aa9.33□□□□□ -0.92
SS18-225ENST00000585121 FAUP35544 74 aaKnown RBP9.33□□□□□ -0.92
SS18-225ENST00000585121 SNCAP37840 140 aa9.33□□□□□ -0.92
SS18-225ENST00000585121 RELQ04864 619 aaPredicted RBP9.33□□□□□ -0.92
SS18-225ENST00000585121 SURF2Q15527 256 aaPredicted RBP9.33□□□□□ -0.92
SS18-225ENST00000585121 HAGHQ16775 308 aa9.33□□□□□ -0.92
SS18-225ENST00000585121 BTNL8Q6UX41 500 aa9.33□□□□□ -0.92
SS18-225ENST00000585121 ZNF114Q8NC26 417 aa9.33□□□□□ -0.92
SS18-225ENST00000585121 OR52B4Q8NGK2 314 aa9.33□□□□□ -0.92
SS18-225ENST00000585121 TMEM190Q8WZ59 177 aa9.33□□□□□ -0.92
SS18-225ENST00000585121 TXN2Q99757 166 aa9.33□□□□□ -0.92
SS18-225ENST00000585121 PRRT1Q99946 306 aa9.33□□□□□ -0.92
SS18-225ENST00000585121 C20orf24Q9BUV8 137 aa9.33□□□□□ -0.92
SS18-225ENST00000585121 DAZ1Q9NQZ3 744 aaKnown RBP9.33□□□□□ -0.92
SS18-225ENST00000585121 MLXQ9UH92 298 aa9.33□□□□□ -0.92
SS18-225ENST00000585121 SCAF4O95104 1147 aaKnown RBP9.32□□□□□ -0.92
SS18-225ENST00000585121 IGKV1-5P01602 117 aa9.32□□□□□ -0.92
SS18-225ENST00000585121 CD7P09564 240 aa9.32□□□□□ -0.92
SS18-225ENST00000585121 C8orf88P0DMB2 117 aa9.32□□□□□ -0.92
SS18-225ENST00000585121 UCP1P25874 307 aa9.32□□□□□ -0.92
SS18-225ENST00000585121 SUB1P53999 127 aaKnown RBP eCLIP9.32□□□□□ -0.92
SS18-225ENST00000585121 SP6Q3SY56 376 aa9.32□□□□□ -0.92
SS18-225ENST00000585121 LAMTOR1Q6IAA8 161 aa9.32□□□□□ -0.92
SS18-225ENST00000585121 FAAP20Q6NZ36 180 aa9.32□□□□□ -0.92
SS18-225ENST00000585121 TMEM61Q8N0U2 210 aa9.32□□□□□ -0.92
SS18-225ENST00000585121 DEFB125Q8N687 156 aa9.32□□□□□ -0.92
SS18-225ENST00000585121 SCGB3A2Q96PL1 93 aa9.32□□□□□ -0.92
SS18-225ENST00000585121 SCP2D1Q9UJQ7 156 aa9.32□□□□□ -0.92
SS18-225ENST00000585121 A0A0B4J293 547 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 MT-CO2P00403 227 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 HOXA1P49639 335 aaPredicted RBP9.31□□□□□ -0.92
SS18-225ENST00000585121 DHODHQ02127 395 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 IZUMO4Q1ZYL8 232 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 SPINK9Q5DT21 86 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 FAM219AQ8IW50 185 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 OR4C16Q8NGL9 310 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 MUC7Q8TAX7 377 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 PINX1Q96BK5 328 aaKnown RBP9.31□□□□□ -0.92
SS18-225ENST00000585121 CHRDL1Q9BU40 450 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 TMEM222Q9H0R3 208 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 NAA60Q9H7X0 242 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 SRD5A3Q9H8P0 318 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 SELENOKQ9Y6D0 94 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 I3L2K1 104 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 K7EMT4 169 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 ST8SIA3O43173 380 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 YIF1AO95070 293 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 FCGR2BP31994 310 aaPredicted RBP9.31□□□□□ -0.92
SS18-225ENST00000585121 OR51S1Q8NGJ8 323 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 CITED4Q96RK1 184 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 RTBDNQ9BSG5 229 aaPredicted RBP9.31□□□□□ -0.92
SS18-225ENST00000585121 MARVELD1Q9BSK0 173 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 C5orf66Q9H5L9 145 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 MCUBQ9NWR8 336 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 KCNIP3Q9Y2W7 256 aa9.31□□□□□ -0.92
SS18-225ENST00000585121 NBEAL2Q6ZNJ1 2754 aa9.3□□□□□ -0.92
SS18-225ENST00000585121 KMT2CQ8NEZ4 4911 aaKnown RBP9.3□□□□□ -0.92
SS18-225ENST00000585121 C15orf62A8K5M9 175 aa9.3□□□□□ -0.92
SS18-225ENST00000585121 INS-IGF2F8WCM5 200 aa9.3□□□□□ -0.92
SS18-225ENST00000585121 CORTO00230 105 aa9.3□□□□□ -0.92
SS18-225ENST00000585121 GNG7O60262 68 aa9.3□□□□□ -0.92
SS18-225ENST00000585121 CTSGP08311 255 aa9.3□□□□□ -0.92
SS18-225ENST00000585121 OR5AC1P0C628 307 aa9.3□□□□□ -0.92
SS18-225ENST00000585121 P0C879 139 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms