RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 SLC35G3Q8N808 338 aa13.41□□□□□ -0.26
SRSF1-209ENST00000585096 RRNAD1Q96FB5 475 aaKnown RBP13.41□□□□□ -0.26
SRSF1-209ENST00000585096 C6orf62Q9GZU0 229 aaPredicted RBP13.41□□□□□ -0.26
SRSF1-209ENST00000585096 WFDC10AQ9H1F0 79 aa13.41□□□□□ -0.26
SRSF1-209ENST00000585096 EDA2RQ9HAV5 297 aa13.41□□□□□ -0.26
SRSF1-209ENST00000585096 A0A0B4J293 547 aa13.4□□□□□ -0.26
SRSF1-209ENST00000585096 RBMY1BA6NDE4 496 aaKnown RBP13.4□□□□□ -0.26
SRSF1-209ENST00000585096 RBMY1EA6NEQ0 496 aaKnown RBP13.4□□□□□ -0.26
SRSF1-209ENST00000585096 MT-CO2P00403 227 aa13.4□□□□□ -0.26
SRSF1-209ENST00000585096 CTSGP08311 255 aa13.4□□□□□ -0.26
SRSF1-209ENST00000585096 RBMY1DP0C7P1 496 aaKnown RBP13.4□□□□□ -0.26
SRSF1-209ENST00000585096 P0C879 139 aa13.4□□□□□ -0.26
SRSF1-209ENST00000585096 AKAIN1P0CW23 69 aa13.4□□□□□ -0.26
SRSF1-209ENST00000585096 UCP1P25874 307 aa13.4□□□□□ -0.26
SRSF1-209ENST00000585096 SURF2Q15527 256 aaPredicted RBP13.4□□□□□ -0.26
SRSF1-209ENST00000585096 RNASE11Q8TAA1 199 aaKnown RBP13.4□□□□□ -0.26
SRSF1-209ENST00000585096 PINX1Q96BK5 328 aaKnown RBP13.4□□□□□ -0.26
SRSF1-209ENST00000585096 SPAG8Q99932 426 aaPredicted RBP13.4□□□□□ -0.26
SRSF1-209ENST00000585096 C15orf62A8K5M9 175 aa13.39□□□□□ -0.27
SRSF1-209ENST00000585096 INS-IGF2F8WCM5 200 aa13.39□□□□□ -0.27
SRSF1-209ENST00000585096 SUB1P53999 127 aaKnown RBP eCLIP13.39□□□□□ -0.273e-12■■■□□ 15.2
SRSF1-209ENST00000585096 SPINK9Q5DT21 86 aa13.39□□□□□ -0.27
SRSF1-209ENST00000585096 FAAP20Q6NZ36 180 aa13.39□□□□□ -0.27
SRSF1-209ENST00000585096 HIPK2Q9H2X6 1198 aa13.39□□□□□ -0.27
SRSF1-209ENST00000585096 RSL24D1Q9UHA3 163 aaKnown RBP13.39□□□□□ -0.27
SRSF1-209ENST00000585096 TEX13DA0A0J9YY54 714 aaPredicted RBP13.38□□□□□ -0.27
SRSF1-209ENST00000585096 H3BMQ9 156 aa13.38□□□□□ -0.27
SRSF1-209ENST00000585096 TSPAN4O14817 238 aa13.38□□□□□ -0.27
SRSF1-209ENST00000585096 ST8SIA3O43173 380 aa13.38□□□□□ -0.27
SRSF1-209ENST00000585096 YIF1AO95070 293 aa13.38□□□□□ -0.27
SRSF1-209ENST00000585096 FAM219AQ8IW50 185 aa13.38□□□□□ -0.27
SRSF1-209ENST00000585096 PRRT1Q99946 306 aa13.38□□□□□ -0.27
SRSF1-209ENST00000585096 RTBDNQ9BSG5 229 aaPredicted RBP13.38□□□□□ -0.27
SRSF1-209ENST00000585096 TMEM222Q9H0R3 208 aa13.38□□□□□ -0.27
SRSF1-209ENST00000585096 NAA60Q9H7X0 242 aa13.38□□□□□ -0.27
SRSF1-209ENST00000585096 ENY2Q9NPA8 101 aa13.38□□□□□ -0.27
SRSF1-209ENST00000585096 GSTZ1O43708 216 aaPredicted RBP13.37□□□□□ -0.27
SRSF1-209ENST00000585096 GNG7O60262 68 aa13.37□□□□□ -0.27
SRSF1-209ENST00000585096 CDS2O95674 445 aa13.37□□□□□ -0.27
SRSF1-209ENST00000585096 OR5AC1P0C628 307 aa13.37□□□□□ -0.27
SRSF1-209ENST00000585096 HOXA1P49639 335 aaPredicted RBP13.37□□□□□ -0.27
SRSF1-209ENST00000585096 DHODHQ02127 395 aa13.37□□□□□ -0.27
SRSF1-209ENST00000585096 DUSP18Q8NEJ0 188 aa13.37□□□□□ -0.27
SRSF1-209ENST00000585096 OR4C16Q8NGL9 310 aa13.37□□□□□ -0.27
SRSF1-209ENST00000585096 SLIRPQ9GZT3 109 aaKnown RBP13.37□□□□□ -0.27
SRSF1-209ENST00000585096 NXF2Q9GZY0 626 aaKnown RBP13.37□□□□□ -0.27
SRSF1-209ENST00000585096 IGHV3OR16-8A0A075B7F1 116 aa13.36□□□□□ -0.27
SRSF1-209ENST00000585096 LOC102724200A0A096LPH7 203 aaPredicted RBP13.36□□□□□ -0.27
SRSF1-209ENST00000585096 CORTO00230 105 aa13.36□□□□□ -0.27
SRSF1-209ENST00000585096 ZNF207O43670 478 aaKnown RBP13.36□□□□□ -0.27
SRSF1-209ENST00000585096 IGHV3-48P01763 117 aa13.36□□□□□ -0.27
SRSF1-209ENST00000585096 ETV6P41212 452 aa13.36□□□□□ -0.27
SRSF1-209ENST00000585096 NPBWR1P48145 328 aa13.36□□□□□ -0.27
SRSF1-209ENST00000585096 MCFD2Q8NI22 146 aa13.36□□□□□ -0.27
SRSF1-209ENST00000585096 GGTLC1Q9BX51 225 aa13.36□□□□□ -0.27
SRSF1-209ENST00000585096 RETNQ9HD89 108 aa13.36□□□□□ -0.27
SRSF1-209ENST00000585096 SMPXQ9UHP9 88 aa13.36□□□□□ -0.27
SRSF1-209ENST00000585096 GPR132Q9UNW8 380 aa13.36□□□□□ -0.27
SRSF1-209ENST00000585096 ANKRD20A5PA0PJZ0 165 aa13.35□□□□□ -0.27
SRSF1-209ENST00000585096 FABP12A6NFH5 140 aa13.35□□□□□ -0.27
SRSF1-209ENST00000585096 OR4C46A6NHA9 309 aa13.35□□□□□ -0.27
SRSF1-209ENST00000585096 TMEM116Q8NCL8 245 aa13.35□□□□□ -0.27
SRSF1-209ENST00000585096 OR51S1Q8NGJ8 323 aa13.35□□□□□ -0.27
SRSF1-209ENST00000585096 GLYATL2Q8WU03 294 aa13.35□□□□□ -0.27
SRSF1-209ENST00000585096 RBPMSQ93062 196 aaKnown RBP13.35□□□□□ -0.27
SRSF1-209ENST00000585096 OR10C1Q96KK4 312 aa13.35□□□□□ -0.27
SRSF1-209ENST00000585096 SCGB3A2Q96PL1 93 aa13.35□□□□□ -0.27
SRSF1-209ENST00000585096 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.35□□□□□ -0.27
SRSF1-209ENST00000585096 SCP2D1Q9UJQ7 156 aa13.35□□□□□ -0.27
SRSF1-209ENST00000585096 TRAV14DV4A0A0A6YYC5 116 aa13.34□□□□□ -0.27
SRSF1-209ENST00000585096 A0A0G2JRQ6 117 aa13.34□□□□□ -0.27
SRSF1-209ENST00000585096 IGHV7-4-1A0A0J9YVY3 117 aa13.34□□□□□ -0.27
SRSF1-209ENST00000585096 CRYM-AS1A6NIL9 109 aa13.34□□□□□ -0.27
SRSF1-209ENST00000585096 TNFSF8P32971 234 aa13.34□□□□□ -0.27
SRSF1-209ENST00000585096 SPCS3P61009 180 aa13.34□□□□□ -0.27
SRSF1-209ENST00000585096 PVRIGQ6DKI7 326 aa13.34□□□□□ -0.27
SRSF1-209ENST00000585096 ZFAND6Q6FIF0 208 aa13.34□□□□□ -0.27
SRSF1-209ENST00000585096 OR52E5Q8NH55 327 aa13.34□□□□□ -0.27
SRSF1-209ENST00000585096 FAM110AQ9BQ89 295 aa13.34□□□□□ -0.27
SRSF1-209ENST00000585096 GINS3Q9BRX5 216 aa13.34□□□□□ -0.27
SRSF1-209ENST00000585096 RHPN1-AS1Q9BWJ2 59 aa13.34□□□□□ -0.27
SRSF1-209ENST00000585096 KCNIP3Q9Y2W7 256 aa13.34□□□□□ -0.27
SRSF1-209ENST00000585096 RNASE2P10153 161 aaKnown RBP13.33□□□□□ -0.28
SRSF1-209ENST00000585096 AARDQ4LEZ3 155 aa13.33□□□□□ -0.28
SRSF1-209ENST00000585096 TMEM268Q5VZI3 342 aa13.33□□□□□ -0.28
SRSF1-209ENST00000585096 Q6ZRM9 215 aa13.33□□□□□ -0.28
SRSF1-209ENST00000585096 SELENOHQ8IZQ5 122 aaKnown RBP13.33□□□□□ -0.28
SRSF1-209ENST00000585096 IL17DQ8TAD2 202 aa13.33□□□□□ -0.28
SRSF1-209ENST00000585096 SOSTQ9BQB4 213 aa13.33□□□□□ -0.28
SRSF1-209ENST00000585096 MCUBQ9NWR8 336 aa13.33□□□□□ -0.28
SRSF1-209ENST00000585096 CHEK1O14757 476 aa13.32□□□□□ -0.28
SRSF1-209ENST00000585096 SCGB2A1O75556 95 aa13.32□□□□□ -0.28
SRSF1-209ENST00000585096 BMI1P35226 326 aa13.32□□□□□ -0.28
SRSF1-209ENST00000585096 LHFPL5Q8TAF8 219 aa13.32□□□□□ -0.28
SRSF1-209ENST00000585096 ZNF414Q96IQ9 312 aa13.32□□□□□ -0.28
SRSF1-209ENST00000585096 RNF2Q99496 336 aa13.32□□□□□ -0.28
SRSF1-209ENST00000585096 CACFD1Q9UGQ2 172 aa13.32□□□□□ -0.28
SRSF1-209ENST00000585096 UBQLN2Q9UHD9 624 aa13.32□□□□□ -0.28
SRSF1-209ENST00000585096 TMEM56-RWDD3S4R434 201 aa13.32□□□□□ -0.28
SRSF1-209ENST00000585096 RYR3Q15413 4870 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms