RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 IL6RP08887 468 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-236ENST00000584991 AREGP15514 252 aa12.15□□□□□ -0.46
CDK5RAP3-236ENST00000584991 ATP5J2P56134 94 aa12.15□□□□□ -0.46
CDK5RAP3-236ENST00000584991 RPL39P5Q59GN2 51 aa12.15□□□□□ -0.46
CDK5RAP3-236ENST00000584991 UTF1Q5T230 341 aa12.15□□□□□ -0.46
CDK5RAP3-236ENST00000584991 SLC24A4Q8NFF2 622 aa12.15□□□□□ -0.46
CDK5RAP3-236ENST00000584991 PSMG3-AS1Q96PY0 264 aa12.15□□□□□ -0.46
CDK5RAP3-236ENST00000584991 USP9YO00507 2555 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-236ENST00000584991 TRBV23-1A0A0A0MS06 115 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 NDUFB4O95168 129 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 PAX1P15863 534 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 NPY1RP25929 384 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 CT45A1Q5HYN5 189 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 SSX9Q7RTT3 188 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 NECAP1Q8NC96 275 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 CT45A3Q8NHU0 189 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 LEAP2Q969E1 77 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 TMEM18Q96B42 140 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 BPESC1Q9GZL8 116 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 TENM4Q6N022 2769 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 MDFIC2A0A1B0GVS7 189 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 C9JCJ5 164 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 AMBPP02760 352 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 ARL14EPLP0DKL9 152 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 KRTAP10-9P60411 292 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 LBHQ53QV2 105 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 PDZD11Q5EBL8 140 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 OR4A47Q6IF82 309 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 ABHD12Q8N2K0 398 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 PNKDQ8N490 385 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 ZNF439Q8NDP4 499 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 C11orf52Q96A22 123 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 SFRP2Q96HF1 295 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 UHRF2Q96PU4 802 aa12.14□□□□□ -0.47
CDK5RAP3-236ENST00000584991 CNN1P51911 297 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-236ENST00000584991 RPS16P62249 146 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-236ENST00000584991 RTL8BQ17RB0 113 aa12.13□□□□□ -0.47
CDK5RAP3-236ENST00000584991 PERPQ96FX8 193 aa12.13□□□□□ -0.47
CDK5RAP3-236ENST00000584991 ELOVL1Q9BW60 279 aa12.13□□□□□ -0.47
CDK5RAP3-236ENST00000584991 SSBP3Q9BWW4 388 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-236ENST00000584991 RPUSD1Q9UJJ7 312 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-236ENST00000584991 ARHGAP32A7KAX9 2087 aa12.13□□□□□ -0.47
CDK5RAP3-236ENST00000584991 SAA2-SAA4A0A096LPE2 208 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 SLC31A2O15432 143 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 SAA2P0DJI9 122 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 ATP5G3P48201 142 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 DLX6P56179 175 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 RPL15P61313 204 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 GAMTQ14353 236 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 MIC13Q5XKP0 118 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 FAM168AQ92567 244 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 SLC35E1Q96K37 410 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 NOL4LQ96MY1 436 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 SPG11Q96JI7 2443 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 TRAV3A0A0B4J244 114 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 PPIAL4CA0A0B4J2A2 164 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 PPIAL4GP0DN37 164 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 IL3RAP26951 378 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 GCHFRP30047 84 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 YPEL3P61236 119 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 RPL19P84098 196 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 PRR20EP86478 221 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 PRR20CP86479 221 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 PRR20DP86480 221 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 PRR20BP86481 221 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 PRR20AP86496 221 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 GCSAMLQ5JQS6 135 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 HIST2H2BCQ6DN03 193 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 TMEM167BQ9NRX6 74 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 FUT9Q9Y231 359 aa12.12□□□□□ -0.47
CDK5RAP3-236ENST00000584991 C22orf46C9J442 243 aa12.11□□□□□ -0.47
CDK5RAP3-236ENST00000584991 GZMBP10144 247 aa12.11□□□□□ -0.47
CDK5RAP3-236ENST00000584991 DDTP30046 118 aa12.11□□□□□ -0.47
CDK5RAP3-236ENST00000584991 CHRNA7P36544 502 aa12.11□□□□□ -0.47
CDK5RAP3-236ENST00000584991 GNG10P50151 68 aa12.11□□□□□ -0.47
CDK5RAP3-236ENST00000584991 UBE2G2P60604 165 aa12.11□□□□□ -0.47
CDK5RAP3-236ENST00000584991 PRCDQ00LT1 54 aa12.11□□□□□ -0.47
CDK5RAP3-236ENST00000584991 ARSJQ5FYB0 599 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-236ENST00000584991 FAM78BQ5VT40 261 aa12.11□□□□□ -0.47
CDK5RAP3-236ENST00000584991 SLC25A48Q6ZT89 311 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-236ENST00000584991 REC114Q7Z4M0 266 aa12.11□□□□□ -0.47
CDK5RAP3-236ENST00000584991 VKORC1L1Q8N0U8 176 aa12.11□□□□□ -0.47
CDK5RAP3-236ENST00000584991 STPG3Q8N7X2 389 aa12.11□□□□□ -0.47
CDK5RAP3-236ENST00000584991 C8orf46Q8TAG6 207 aa12.11□□□□□ -0.47
CDK5RAP3-236ENST00000584991 C1orf159Q96HA4 380 aa12.11□□□□□ -0.47
CDK5RAP3-236ENST00000584991 A0A0U1RQK1 487 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 ZNF320A2RRD8 509 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 CLEC2AQ6UVW9 174 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 C11orf42Q8N5U0 333 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 LINC00469Q8N7U9 141 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 OR10G8Q8NGN5 311 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 OR5B3Q8NH48 314 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 TMEM37Q8WXS4 190 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 PIMREGQ9BSJ6 248 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 BET1LQ9NYM9 111 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 SLC45A2Q9UMX9 530 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 OR51B2Q9Y5P1 312 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 TRAPPC1Q9Y5R8 145 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 LOC105371242A0A075B767 164 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 INS-IGF2F8WCM5 200 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms