RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 A0A0B4J2A0 478 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 FAM240BA0A1B0GVZ2 78 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 IGLC7A0M8Q6 106 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 C15orf61A6NNL5 157 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 PRYO14603 147 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 PITX3O75364 302 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 CNIH1O95406 144 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 OPN1MWP04001 364 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 SERPINE2P07093 398 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 NPSP0C0P6 89 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 APELAP0DMC3 54 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 OPN1MW2P0DN77 364 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 OPN1MW3P0DN78 364 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 AREGP15514 252 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 CTRB1P17538 263 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 RPL27AP46776 148 aaKnown RBP4.36□□□□□ -1.71
CDH8-213ENST00000584966 RAB9AP51151 201 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 MFAP2P55001 183 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 GNB1P62873 340 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 WT1-ASQ06250 92 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 DHRS2Q13268 280 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 ECSCRQ19T08 205 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 PDLIM3Q53GG5 364 aaPredicted RBP4.36□□□□□ -1.71
CDH8-213ENST00000584966 TMEM268Q5VZI3 342 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 CTRB2Q6GPI1 263 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 TEX38Q6PEX7 206 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 UNQ5815/PRO19632Q6UWF5 114 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 Q6ZNX1 250 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 C19orf35Q6ZS72 473 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 ZNF429Q86V71 674 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 SLC35G3Q8N808 338 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 C3orf56Q8N813 242 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 ZNF491Q8N8L2 437 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 OR5T1Q8NG75 326 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 OR10W1Q8NGF6 305 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 OR52B4Q8NGK2 314 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 GRPEL2Q8TAA5 225 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 CASTOR1Q8WTX7 329 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 RBPMSQ93062 196 aaKnown RBP4.36□□□□□ -1.71
CDH8-213ENST00000584966 LSM10Q969L4 123 aaKnown RBP4.36□□□□□ -1.71
CDH8-213ENST00000584966 TSC22D3Q99576 134 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 MARVELD1Q9BSK0 173 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 QTRT1Q9BXR0 403 aaKnown RBP4.36□□□□□ -1.71
CDH8-213ENST00000584966 SHPKQ9UHJ6 478 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 FOXA2Q9Y261 457 aaPredicted RBP4.36□□□□□ -1.71
CDH8-213ENST00000584966 KCNIP3Q9Y2W7 256 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 NOTCH3Q9UM47 2321 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 MGAM2Q2M2H8 2515 aa4.36□□□□□ -1.71
CDH8-213ENST00000584966 A0A1W2PN81 502 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 TCRBV4S1A1TA0A5B7 111 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 MPTX1A8MV57 137 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 INS-IGF2F8WCM5 200 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 ST8SIA3O43173 380 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 DUS4LO95620 317 aaKnown RBP4.35□□□□□ -1.71
CDH8-213ENST00000584966 NUDT3O95989 172 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 IL5P05113 134 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 TRAPPC2P0DI81 140 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 TRAPPC2BP0DI82 140 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 VDAC1P21796 283 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 ARL3P36405 182 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 CHRNA7P36544 502 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 CDX1P47902 265 aaPredicted RBP4.35□□□□□ -1.71
CDH8-213ENST00000584966 ERVK-16P61578 105 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 HSPE1P61604 102 aaKnown RBP4.35□□□□□ -1.71
CDH8-213ENST00000584966 SLC35B1P78383 322 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 TMEM267Q0VDI3 215 aaPredicted RBP4.35□□□□□ -1.71
CDH8-213ENST00000584966 DCTN2Q13561 401 aaKnown RBP4.35□□□□□ -1.71
CDH8-213ENST00000584966 C2orf68Q2NKX9 166 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 TRIM16LQ309B1 348 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 PVRIGQ6DKI7 326 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 C11orf87Q6NUJ2 197 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 H2BFWTQ7Z2G1 175 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 LYG2Q86SG7 212 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 ZNF695Q8IW36 515 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 FAM219AQ8IW50 185 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 LGI3Q8N145 548 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 COMMD1Q8N668 190 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 OR5M8Q8NGP6 311 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 OR1L8Q8NGR8 309 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 OR52E5Q8NH55 327 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 FAM110DQ8TAY7 271 aaPredicted RBP4.35□□□□□ -1.71
CDH8-213ENST00000584966 C2CD4CQ8TF44 421 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 MITD1Q8WV92 249 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 TMEM68Q96MH6 324 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 FYTTD1Q96QD9 318 aaKnown RBP4.35□□□□□ -1.71
CDH8-213ENST00000584966 SPIN2AQ99865 258 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 SPIN2BQ9BPZ2 258 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 SRSF8Q9BRL6 282 aaKnown RBP4.35□□□□□ -1.71
CDH8-213ENST00000584966 SEC22CQ9BRL7 303 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 MLST8Q9BVC4 326 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 GON7Q9BXV9 100 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 GNB4Q9HAV0 340 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 ZFP57Q9NU63 452 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 NUDT15Q9NV35 164 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 ZNF257Q9Y2Q1 563 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 OR51B2Q9Y5P1 312 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 NOTCH1P46531 2555 aa4.35□□□□□ -1.71
CDH8-213ENST00000584966 HUWE1Q7Z6Z7 4374 aaKnown RBP4.35□□□□□ -1.71
CDH8-213ENST00000584966 IGLV11-55A0A075B6I3 123 aa4.34□□□□□ -1.71
CDH8-213ENST00000584966 DUXBA0A1W2PPF3 345 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms