RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	ZNF414	Q96IQ9	312 aa		10.03	□□□□□ -0.8
SREBF1-223	ENST00000584760	CHRDL1	Q9BU40	450 aa		10.03	□□□□□ -0.8
SREBF1-223	ENST00000584760	MLX	Q9UH92	298 aa		10.03	□□□□□ -0.8
SREBF1-223	ENST00000584760	DYNC2H1	Q8NCM8	4307 aa	Known RBP	10.03	□□□□□ -0.8
SREBF1-223	ENST00000584760	ZNF785	A8K8V0	405 aa		10.02	□□□□□ -0.81
SREBF1-223	ENST00000584760	C8orf88	P0DMB2	117 aa		10.02	□□□□□ -0.81
SREBF1-223	ENST00000584760	ELL	P55199	621 aa	Predicted RBP	10.02	□□□□□ -0.81
SREBF1-223	ENST00000584760	TM4SF20	Q53R12	229 aa		10.02	□□□□□ -0.81
SREBF1-223	ENST00000584760		Q6ZRM9	215 aa		10.02	□□□□□ -0.81
SREBF1-223	ENST00000584760	CCDC190	Q86UF4	302 aa		10.02	□□□□□ -0.81
SREBF1-223	ENST00000584760	FAM219A	Q8IW50	185 aa		10.02	□□□□□ -0.81
SREBF1-223	ENST00000584760	TMEM61	Q8N0U2	210 aa		10.02	□□□□□ -0.81
SREBF1-223	ENST00000584760	SLC35G3	Q8N808	338 aa		10.02	□□□□□ -0.81
SREBF1-223	ENST00000584760	UXS1	Q8NBZ7	420 aa		10.02	□□□□□ -0.81
SREBF1-223	ENST00000584760	RNASE11	Q8TAA1	199 aa	Known RBP	10.02	□□□□□ -0.81
SREBF1-223	ENST00000584760	RRNAD1	Q96FB5	475 aa	Known RBP	10.02	□□□□□ -0.81
SREBF1-223	ENST00000584760	MISP3	Q96FF7	219 aa		10.02	□□□□□ -0.81
SREBF1-223	ENST00000584760	MCUB	Q9NWR8	336 aa		10.02	□□□□□ -0.81
SREBF1-223	ENST00000584760	SCP2D1	Q9UJQ7	156 aa		10.02	□□□□□ -0.81
SREBF1-223	ENST00000584760	MT-CO2	P00403	227 aa		10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	IFNA17	P01571	189 aa		10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	FCGR2B	P31994	310 aa	Predicted RBP	10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	S100A5	P33763	92 aa		10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	ETV6	P41212	452 aa		10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	ERH	P84090	104 aa	Known RBP	10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	DHODH	Q02127	395 aa		10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	PYDC2	Q56P42	97 aa		10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760		Q56UQ5	140 aa		10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	TMEM268	Q5VZI3	342 aa		10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	PVRIG	Q6DKI7	326 aa		10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	BTNL8	Q6UX41	500 aa		10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	SELENOH	Q8IZQ5	122 aa	Known RBP	10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	UBAC2	Q8NBM4	344 aa		10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	MARC2	Q969Z3	335 aa		10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	WDR89	Q96FK6	387 aa	Predicted RBP	10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	GALNT14	Q96FL9	552 aa		10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	PDCD10	Q9BUL8	212 aa		10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	ZMAT4	Q9H898	229 aa		10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	UFC1	Q9Y3C8	167 aa		10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	SELENOK	Q9Y6D0	94 aa		10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	TMEM56-RWDD3	S4R434	201 aa		10.01	□□□□□ -0.81
SREBF1-223	ENST00000584760	NDUFA4	O00483	81 aa		10	□□□□□ -0.81
SREBF1-223	ENST00000584760	CTSG	P08311	255 aa		10	□□□□□ -0.81
SREBF1-223	ENST00000584760	CD7	P09564	240 aa		10	□□□□□ -0.81
SREBF1-223	ENST00000584760	RNASE2	P10153	161 aa	Known RBP	10	□□□□□ -0.81
SREBF1-223	ENST00000584760	FAU	P35544	74 aa	Known RBP	10	□□□□□ -0.81
SREBF1-223	ENST00000584760	AP3S2	P59780	193 aa		10	□□□□□ -0.81
SREBF1-223	ENST00000584760	CD81	P60033	236 aa		10	□□□□□ -0.81
SREBF1-223	ENST00000584760	SUPT4H1	P63272	117 aa	Known RBP	10	□□□□□ -0.81
SREBF1-223	ENST00000584760	ZNF57	Q68EA5	555 aa	Predicted RBP	10	□□□□□ -0.81
SREBF1-223	ENST00000584760	SCGB3A2	Q96PL1	93 aa		10	□□□□□ -0.81
SREBF1-223	ENST00000584760	CITED4	Q96RK1	184 aa		10	□□□□□ -0.81
SREBF1-223	ENST00000584760	NEURL2	Q9BR09	285 aa		10	□□□□□ -0.81
SREBF1-223	ENST00000584760	TM2D3	Q9BRN9	247 aa		10	□□□□□ -0.81
SREBF1-223	ENST00000584760	DAZ1	Q9NQZ3	744 aa	Known RBP	10	□□□□□ -0.81
SREBF1-223	ENST00000584760	PRR13	Q9NZ81	148 aa		10	□□□□□ -0.81
SREBF1-223	ENST00000584760	MRPL27	Q9P0M9	148 aa	Known RBP	10	□□□□□ -0.81
SREBF1-223	ENST00000584760	CACNG5	Q9UF02	275 aa		10	□□□□□ -0.81
SREBF1-223	ENST00000584760	IGHV3-48	P01763	117 aa		9.99	□□□□□ -0.81
SREBF1-223	ENST00000584760	SNCA	P37840	140 aa		9.99	□□□□□ -0.81
SREBF1-223	ENST00000584760	HOXA1	P49639	335 aa	Predicted RBP	9.99	□□□□□ -0.81
SREBF1-223	ENST00000584760	MFAP4	P55083	255 aa		9.99	□□□□□ -0.81
SREBF1-223	ENST00000584760	TMEM187	Q14656	261 aa		9.99	□□□□□ -0.81
SREBF1-223	ENST00000584760	GUCA2B	Q16661	112 aa		9.99	□□□□□ -0.81
SREBF1-223	ENST00000584760	BSX	Q3C1V8	233 aa		9.99	□□□□□ -0.81
SREBF1-223	ENST00000584760	TOMM5	Q8N4H5	51 aa		9.99	□□□□□ -0.81
SREBF1-223	ENST00000584760	OR52E5	Q8NH55	327 aa		9.99	□□□□□ -0.81
SREBF1-223	ENST00000584760	DEDD2	Q8WXF8	326 aa		9.99	□□□□□ -0.81
SREBF1-223	ENST00000584760	IL22RA2	Q969J5	263 aa		9.99	□□□□□ -0.81
SREBF1-223	ENST00000584760	PINX1	Q96BK5	328 aa	Known RBP	9.99	□□□□□ -0.81
SREBF1-223	ENST00000584760	GPR146	Q96CH1	333 aa		9.99	□□□□□ -0.81
SREBF1-223	ENST00000584760	TXN2	Q99757	166 aa		9.99	□□□□□ -0.81
SREBF1-223	ENST00000584760	SRR	Q9GZT4	340 aa		9.99	□□□□□ -0.81
SREBF1-223	ENST00000584760	WFDC10A	Q9H1F0	79 aa		9.99	□□□□□ -0.81
SREBF1-223	ENST00000584760	DNAH7	Q8WXX0	4024 aa		9.98	□□□□□ -0.81
SREBF1-223	ENST00000584760	IGHV3OR16-8	A0A075B7F1	116 aa		9.98	□□□□□ -0.81
SREBF1-223	ENST00000584760	C15orf62	A8K5M9	175 aa		9.98	□□□□□ -0.81
SREBF1-223	ENST00000584760	NUPL2	O15504	423 aa	Known RBP	9.98	□□□□□ -0.81
SREBF1-223	ENST00000584760	SPCS3	P61009	180 aa		9.98	□□□□□ -0.81
SREBF1-223	ENST00000584760	SPANXN2	Q5MJ10	180 aa		9.98	□□□□□ -0.81
SREBF1-223	ENST00000584760	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	9.98	□□□□□ -0.81
SREBF1-223	ENST00000584760	SACS	Q9NZJ4	4579 aa		9.98	□□□□□ -0.81
SREBF1-223	ENST00000584760	TRAV25	A0A0B4J276	109 aa		9.97	□□□□□ -0.81
SREBF1-223	ENST00000584760		K7EMT4	169 aa		9.97	□□□□□ -0.81
SREBF1-223	ENST00000584760	CORT	O00230	105 aa		9.97	□□□□□ -0.81
SREBF1-223	ENST00000584760	SCAF4	O95104	1147 aa	Known RBP	9.97	□□□□□ -0.81
SREBF1-223	ENST00000584760	AKR1C4	P17516	323 aa		9.97	□□□□□ -0.81
SREBF1-223	ENST00000584760	REL	Q04864	619 aa	Predicted RBP	9.97	□□□□□ -0.81
SREBF1-223	ENST00000584760	NMS	Q5H8A3	153 aa		9.97	□□□□□ -0.81
SREBF1-223	ENST00000584760	LINC00322	Q6ZN03	302 aa	Predicted RBP	9.97	□□□□□ -0.81
SREBF1-223	ENST00000584760	OR10C1	Q96KK4	312 aa		9.97	□□□□□ -0.81
SREBF1-223	ENST00000584760	C20orf24	Q9BUV8	137 aa		9.97	□□□□□ -0.81
SREBF1-223	ENST00000584760	KRTAP17-1	Q9BYP8	105 aa		9.97	□□□□□ -0.81
SREBF1-223	ENST00000584760	ENY2	Q9NPA8	101 aa		9.97	□□□□□ -0.81
SREBF1-223	ENST00000584760	KCNIP3	Q9Y2W7	256 aa		9.97	□□□□□ -0.81
SREBF1-223	ENST00000584760		A0A0B4J2A0	478 aa		9.96	□□□□□ -0.82
SREBF1-223	ENST00000584760	OR11H12	B2RN74	326 aa		9.96	□□□□□ -0.82
SREBF1-223	ENST00000584760	ZNF207	O43670	478 aa	Known RBP	9.96	□□□□□ -0.82
SREBF1-223	ENST00000584760	GNG7	O60262	68 aa		9.96	□□□□□ -0.82
SREBF1-223	ENST00000584760	SULT1A3	P0DMM9	295 aa		9.96	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms