RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 GUCA2BQ16661 112 aa7.65□□□□□ -1.18
GGA3-219ENST00000584550 TMEM268Q5VZI3 342 aa7.65□□□□□ -1.18
GGA3-219ENST00000584550 LGALS9CQ6DKI2 356 aa7.65□□□□□ -1.18
GGA3-219ENST00000584550 SLC25A24Q6NUK1 477 aa7.65□□□□□ -1.18
GGA3-219ENST00000584550 ZNF343Q6P1L6 599 aa7.65□□□□□ -1.18
GGA3-219ENST00000584550 SELENOHQ8IZQ5 122 aaKnown RBP7.65□□□□□ -1.18
GGA3-219ENST00000584550 OR5B3Q8NH48 314 aa7.65□□□□□ -1.18
GGA3-219ENST00000584550 LHFPL5Q8TAF8 219 aa7.65□□□□□ -1.18
GGA3-219ENST00000584550 GLYATL2Q8WU03 294 aa7.65□□□□□ -1.18
GGA3-219ENST00000584550 LSM10Q969L4 123 aaKnown RBP7.65□□□□□ -1.18
GGA3-219ENST00000584550 TMEM56Q96MV1 263 aa7.65□□□□□ -1.18
GGA3-219ENST00000584550 FANCD2OSQ96PS1 177 aa7.65□□□□□ -1.18
GGA3-219ENST00000584550 TMEM14BQ9NUH8 114 aa7.65□□□□□ -1.18
GGA3-219ENST00000584550 PKHD1P08F94 4074 aa7.64□□□□□ -1.19
GGA3-219ENST00000584550 IGHV3-21A0A0B4J1V1 117 aa7.64□□□□□ -1.19
GGA3-219ENST00000584550 A0A0B4J293 547 aa7.64□□□□□ -1.19
GGA3-219ENST00000584550 CENPXA8MT69 81 aa7.64□□□□□ -1.19
GGA3-219ENST00000584550 CDS2O95674 445 aa7.64□□□□□ -1.19
GGA3-219ENST00000584550 IFNA17P01571 189 aa7.64□□□□□ -1.19
GGA3-219ENST00000584550 FGF2P09038 288 aa7.64□□□□□ -1.19
GGA3-219ENST00000584550 HIST1H1BP16401 226 aaKnown RBP7.64□□□□□ -1.19
GGA3-219ENST00000584550 VAMP1P23763 118 aa7.64□□□□□ -1.19
GGA3-219ENST00000584550 HSPE1P61604 102 aaKnown RBP7.64□□□□□ -1.19
GGA3-219ENST00000584550 PRR20EP86478 221 aa7.64□□□□□ -1.19
GGA3-219ENST00000584550 PRR20CP86479 221 aa7.64□□□□□ -1.19
GGA3-219ENST00000584550 PRR20DP86480 221 aa7.64□□□□□ -1.19
GGA3-219ENST00000584550 PRR20BP86481 221 aa7.64□□□□□ -1.19
GGA3-219ENST00000584550 PRR20AP86496 221 aa7.64□□□□□ -1.19
GGA3-219ENST00000584550 TMEM187Q14656 261 aa7.64□□□□□ -1.19
GGA3-219ENST00000584550 TATDN3Q17R31 274 aa7.64□□□□□ -1.19
GGA3-219ENST00000584550 HSD17B13Q7Z5P4 300 aaPredicted RBP7.64□□□□□ -1.19
GGA3-219ENST00000584550 CADM3Q8N126 398 aa7.64□□□□□ -1.19
GGA3-219ENST00000584550 RBPMSQ93062 196 aaKnown RBP7.64□□□□□ -1.19
GGA3-219ENST00000584550 SLC25A21Q9BQT8 299 aaPredicted RBP7.64□□□□□ -1.19
GGA3-219ENST00000584550 SRSF8Q9BRL6 282 aaKnown RBP7.64□□□□□ -1.19
GGA3-219ENST00000584550 PDCD10Q9BUL8 212 aa7.64□□□□□ -1.19
GGA3-219ENST00000584550 KRTAP4-5Q9BYR2 181 aa7.64□□□□□ -1.19
GGA3-219ENST00000584550 IGLV11-55A0A075B6I3 123 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 NAP1L6A6NFF2 107 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 PPP5D1E7EU14 171 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 CYB5BO43169 146 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 ST8SIA3O43173 380 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 NXPH3O95157 252 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 HLA-AP01891 365 aaKnown RBP7.63□□□□□ -1.19
GGA3-219ENST00000584550 P0C879 139 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 ANXA3P12429 323 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 EDN2P20800 178 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 SUPT4H1P63272 117 aaKnown RBP7.63□□□□□ -1.19
GGA3-219ENST00000584550 RPEL1Q2QD12 228 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 THOC7Q6I9Y2 204 aaKnown RBP7.63□□□□□ -1.19
GGA3-219ENST00000584550 CLEC19AQ6UXS0 136 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 Q6ZRM9 215 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 LYG2Q86SG7 212 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 CENPSQ8N2Z9 138 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 SLC35G3Q8N808 338 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 DEDD2Q8WXF8 326 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 EEF1AKMT3Q96AZ1 226 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 GPR146Q96CH1 333 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 ZC4H2Q9NQZ6 224 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 FLVCR2Q9UPI3 526 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 DMRT1Q9Y5R6 373 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 MUC4Q99102 2169 aa7.63□□□□□ -1.19
GGA3-219ENST00000584550 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.62□□□□□ -1.19
GGA3-219ENST00000584550 MFSD2BA6NFX1 497 aa7.62□□□□□ -1.19
GGA3-219ENST00000584550 MED14OSP0DP75 135 aa7.62□□□□□ -1.19
GGA3-219ENST00000584550 HOXA1P49639 335 aaPredicted RBP7.62□□□□□ -1.19
GGA3-219ENST00000584550 MFAP2P55001 183 aa7.62□□□□□ -1.19
GGA3-219ENST00000584550 ERHP84090 104 aaKnown RBP7.62□□□□□ -1.19
GGA3-219ENST00000584550 PRCDQ00LT1 54 aa7.62□□□□□ -1.19
GGA3-219ENST00000584550 RBMS2Q15434 407 aaKnown RBP7.62□□□□□ -1.19
GGA3-219ENST00000584550 TMEM128Q5BJH2 165 aa7.62□□□□□ -1.19
GGA3-219ENST00000584550 LYZL2Q7Z4W2 148 aa7.62□□□□□ -1.19
GGA3-219ENST00000584550 OR2C3Q8N628 320 aa7.62□□□□□ -1.19
GGA3-219ENST00000584550 DYNLRB2Q8TF09 96 aa7.62□□□□□ -1.19
GGA3-219ENST00000584550 S100ZQ8WXG8 99 aa7.62□□□□□ -1.19
GGA3-219ENST00000584550 MISP3Q96FF7 219 aa7.62□□□□□ -1.19
GGA3-219ENST00000584550 WDR89Q96FK6 387 aaPredicted RBP7.62□□□□□ -1.19
GGA3-219ENST00000584550 GALNT14Q96FL9 552 aa7.62□□□□□ -1.19
GGA3-219ENST00000584550 ENY2Q9NPA8 101 aa7.62□□□□□ -1.19
GGA3-219ENST00000584550 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.62□□□□□ -1.19
GGA3-219ENST00000584550 PTTG2Q9NZH5 202 aa7.62□□□□□ -1.19
GGA3-219ENST00000584550 THYN1Q9P016 225 aa7.62□□□□□ -1.19
GGA3-219ENST00000584550 PEMTQ9UBM1 199 aa7.62□□□□□ -1.19
GGA3-219ENST00000584550 CACNG5Q9UF02 275 aa7.62□□□□□ -1.19
GGA3-219ENST00000584550 F11RQ9Y624 299 aaKnown RBP7.62□□□□□ -1.19
GGA3-219ENST00000584550 TMEM56-RWDD3S4R434 201 aa7.62□□□□□ -1.19
GGA3-219ENST00000584550 BMPR1BO00238 502 aa7.61□□□□□ -1.19
GGA3-219ENST00000584550 NDUFB6O95139 128 aa7.61□□□□□ -1.19
GGA3-219ENST00000584550 OR2C1O95371 312 aa7.61□□□□□ -1.19
GGA3-219ENST00000584550 CLEC3BP05452 202 aa7.61□□□□□ -1.19
GGA3-219ENST00000584550 GPR183P32249 361 aa7.61□□□□□ -1.19
GGA3-219ENST00000584550 ARL3P36405 182 aa7.61□□□□□ -1.19
GGA3-219ENST00000584550 SNCAP37840 140 aa7.61□□□□□ -1.19
GGA3-219ENST00000584550 SRPXP78539 464 aa7.61□□□□□ -1.19
GGA3-219ENST00000584550 PPP1R1AQ13522 171 aa7.61□□□□□ -1.19
GGA3-219ENST00000584550 DEFB114Q30KQ6 69 aa7.61□□□□□ -1.19
GGA3-219ENST00000584550 FAM219AQ8IW50 185 aa7.61□□□□□ -1.19
GGA3-219ENST00000584550 LGI3Q8N145 548 aa7.61□□□□□ -1.19
GGA3-219ENST00000584550 OR2K2Q8NGT1 345 aa7.61□□□□□ -1.19
GGA3-219ENST00000584550 PHLDA1Q8WV24 401 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms