RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 RHOGP84095 191 aa14.29□□□□□ -0.12
RFFL-211ENST00000584541 EXOSC2Q13868 293 aaKnown RBP14.29□□□□□ -0.12
RFFL-211ENST00000584541 FAM223AQ8IWN6 122 aa14.29□□□□□ -0.12
RFFL-211ENST00000584541 RNASEH2CQ8TDP1 164 aaKnown RBP14.29□□□□□ -0.12
RFFL-211ENST00000584541 WIPF2Q8TF74 440 aaPredicted RBP14.29□□□□□ -0.12
RFFL-211ENST00000584541 DCUN1D4Q92564 292 aa14.29□□□□□ -0.12
RFFL-211ENST00000584541 FANCD2OSQ96PS1 177 aa14.29□□□□□ -0.12
RFFL-211ENST00000584541 C11orf1Q9H5F2 150 aa14.29□□□□□ -0.12
RFFL-211ENST00000584541 MBD2Q9UBB5 411 aa14.29□□□□□ -0.12
RFFL-211ENST00000584541 FBXL7Q9UJT9 491 aa14.29□□□□□ -0.12
RFFL-211ENST00000584541 DNHD1Q96M86 4753 aa14.29□□□□□ -0.12
RFFL-211ENST00000584541 TRAV14DV4A0A0A6YYC5 116 aa14.28□□□□□ -0.12
RFFL-211ENST00000584541 A0A0G2JLM5 398 aa14.28□□□□□ -0.12
RFFL-211ENST00000584541 C15orf62A8K5M9 175 aa14.28□□□□□ -0.12
RFFL-211ENST00000584541 H0YIZ8 118 aa14.28□□□□□ -0.12
RFFL-211ENST00000584541 SCAF4O95104 1147 aaKnown RBP14.28□□□□□ -0.12
RFFL-211ENST00000584541 MFAP2P55001 183 aa14.28□□□□□ -0.12
RFFL-211ENST00000584541 KLK9Q2XQG4 91 aa14.28□□□□□ -0.12
RFFL-211ENST00000584541 ETV3LQ6ZN32 361 aa14.28□□□□□ -0.12
RFFL-211ENST00000584541 RNF152Q8N8N0 203 aa14.28□□□□□ -0.12
RFFL-211ENST00000584541 PINX1Q96BK5 328 aaKnown RBP14.28□□□□□ -0.12
RFFL-211ENST00000584541 USMG5Q96IX5 58 aa14.28□□□□□ -0.12
RFFL-211ENST00000584541 OR4C12Q96R67 309 aa14.28□□□□□ -0.12
RFFL-211ENST00000584541 RNF126Q9BV68 326 aa14.28□□□□□ -0.12
RFFL-211ENST00000584541 SLC25A31Q9H0C2 315 aa14.28□□□□□ -0.12
RFFL-211ENST00000584541 KLK15Q9H2R5 256 aa14.28□□□□□ -0.12
RFFL-211ENST00000584541 LYRM2Q9NU23 88 aaPredicted RBP14.28□□□□□ -0.12
RFFL-211ENST00000584541 KLK9Q9UKQ9 250 aa14.28□□□□□ -0.12
RFFL-211ENST00000584541 RPS10-NUDT3A0A1W2PQS6 291 aa14.27□□□□□ -0.13
RFFL-211ENST00000584541 LYL1P12980 280 aa14.27□□□□□ -0.13
RFFL-211ENST00000584541 NUP62P37198 522 aaPredicted RBP14.27□□□□□ -0.13
RFFL-211ENST00000584541 OPRK1P41145 380 aa14.27□□□□□ -0.13
RFFL-211ENST00000584541 ATP5G2Q06055 141 aa14.27□□□□□ -0.13
RFFL-211ENST00000584541 KHDC1LQ5JSQ8 128 aa14.27□□□□□ -0.13
RFFL-211ENST00000584541 PVRIGQ6DKI7 326 aa14.27□□□□□ -0.13
RFFL-211ENST00000584541 TMEM14EPQ6UXP3 125 aa14.27□□□□□ -0.13
RFFL-211ENST00000584541 STX12Q86Y82 276 aa14.27□□□□□ -0.13
RFFL-211ENST00000584541 WFDC12Q8WWY7 111 aa14.27□□□□□ -0.13
RFFL-211ENST00000584541 ST6GAL2Q96JF0 529 aa14.27□□□□□ -0.13
RFFL-211ENST00000584541 CXorf58Q96LI9 332 aa14.27□□□□□ -0.13
RFFL-211ENST00000584541 DMRT1Q9Y5R6 373 aa14.27□□□□□ -0.13
RFFL-211ENST00000584541 TCRBV4S1A1TA0A5B7 111 aa14.26□□□□□ -0.13
RFFL-211ENST00000584541 FAM24AA6NFZ4 105 aa14.26□□□□□ -0.13
RFFL-211ENST00000584541 NDUFB8O95169 186 aa14.26□□□□□ -0.13
RFFL-211ENST00000584541 RPLP1P05386 114 aaKnown RBP14.26□□□□□ -0.13
RFFL-211ENST00000584541 METTL15P1P0C7V9 234 aa14.26□□□□□ -0.13
RFFL-211ENST00000584541 SLC25A4P12235 298 aa14.26□□□□□ -0.13
RFFL-211ENST00000584541 C15orf32Q32M92 178 aa14.26□□□□□ -0.13
RFFL-211ENST00000584541 ETFRF1Q6IPR1 90 aa14.26□□□□□ -0.13
RFFL-211ENST00000584541 LCNL1Q6ZST4 164 aa14.26□□□□□ -0.13
RFFL-211ENST00000584541 TCTE3Q8IZS6 198 aa14.26□□□□□ -0.13
RFFL-211ENST00000584541 TMEM170AQ8WVE7 144 aa14.26□□□□□ -0.13
RFFL-211ENST00000584541 FXYD6-FXYD2A0A087WZ82 144 aa14.25□□□□□ -0.13
RFFL-211ENST00000584541 MT-CO2P00403 227 aa14.25□□□□□ -0.13
RFFL-211ENST00000584541 CD28P10747 220 aa14.25□□□□□ -0.13
RFFL-211ENST00000584541 Q5BKY6 102 aa14.25□□□□□ -0.13
RFFL-211ENST00000584541 OR8G2PQ6IF36 304 aa14.25□□□□□ -0.13
RFFL-211ENST00000584541 C12orf54Q6X4T0 127 aa14.25□□□□□ -0.13
RFFL-211ENST00000584541 TMEM252Q8N6L7 170 aa14.25□□□□□ -0.13
RFFL-211ENST00000584541 C11orf44Q8N8P7 122 aa14.25□□□□□ -0.13
RFFL-211ENST00000584541 OR10P1Q8NGE3 313 aa14.25□□□□□ -0.13
RFFL-211ENST00000584541 VN1R17PQ8TDU5 208 aa14.25□□□□□ -0.13
RFFL-211ENST00000584541 EEF1AKMT3Q96AZ1 226 aa14.25□□□□□ -0.13
RFFL-211ENST00000584541 ZC4H2Q9NQZ6 224 aa14.25□□□□□ -0.13
RFFL-211ENST00000584541 SMLR1H3BR10 107 aa14.24□□□□□ -0.13
RFFL-211ENST00000584541 SULT1A1P50225 295 aa14.24□□□□□ -0.13
RFFL-211ENST00000584541 HBG1P69891 147 aa14.24□□□□□ -0.13
RFFL-211ENST00000584541 HBG2P69892 147 aa14.24□□□□□ -0.13
RFFL-211ENST00000584541 DEFA5Q01523 94 aa14.24□□□□□ -0.13
RFFL-211ENST00000584541 ZNF546Q86UE3 836 aa14.24□□□□□ -0.13
RFFL-211ENST00000584541 ZNF491Q8N8L2 437 aa14.24□□□□□ -0.13
RFFL-211ENST00000584541 MYOZ3Q8TDC0 251 aa14.24□□□□□ -0.13
RFFL-211ENST00000584541 UBE2E2Q96LR5 201 aa14.24□□□□□ -0.13
RFFL-211ENST00000584541 TSSC4Q9Y5U2 329 aaPredicted RBP14.24□□□□□ -0.13
RFFL-211ENST00000584541 TRBV7-1A0A0A6YYK4 115 aa14.23□□□□□ -0.13
RFFL-211ENST00000584541 IGSF23A1L1A6 192 aa14.23□□□□□ -0.13
RFFL-211ENST00000584541 I3L2K1 104 aa14.23□□□□□ -0.13
RFFL-211ENST00000584541 K7EIM0 57 aa14.23□□□□□ -0.13
RFFL-211ENST00000584541 RPL12P30050 165 aaKnown RBP14.23□□□□□ -0.13
RFFL-211ENST00000584541 GPX4P36969 197 aaPredicted RBP14.23□□□□□ -0.13
RFFL-211ENST00000584541 CD69Q07108 199 aa14.23□□□□□ -0.13
RFFL-211ENST00000584541 BAXQ07812 192 aa14.23□□□□□ -0.13
RFFL-211ENST00000584541 TCTEX1D4Q5JR98 221 aa14.23□□□□□ -0.13
RFFL-211ENST00000584541 FAM209BQ5JX69 171 aa14.23□□□□□ -0.13
RFFL-211ENST00000584541 INO80EQ8NBZ0 244 aaPredicted RBP14.23□□□□□ -0.13
RFFL-211ENST00000584541 SCARB1Q8WTV0 552 aa14.23□□□□□ -0.13
RFFL-211ENST00000584541 CACNG8Q8WXS5 425 aa14.23□□□□□ -0.13
RFFL-211ENST00000584541 IGHV3-21A0A0B4J1V1 117 aa14.22□□□□□ -0.13
RFFL-211ENST00000584541 G3V3Q6 166 aa14.22□□□□□ -0.13
RFFL-211ENST00000584541 PFDN1O60925 122 aa14.22□□□□□ -0.13
RFFL-211ENST00000584541 CST7O76096 145 aa14.22□□□□□ -0.13
RFFL-211ENST00000584541 CDX1P47902 265 aaPredicted RBP14.22□□□□□ -0.13
RFFL-211ENST00000584541 MFAP4P55083 255 aa14.22□□□□□ -0.13
RFFL-211ENST00000584541 EWSR1Q01844 656 aaKnown RBP eCLIP14.22□□□□□ -0.13
RFFL-211ENST00000584541 ACSM6Q6P461 480 aa14.22□□□□□ -0.13
RFFL-211ENST00000584541 SLC16A13Q7RTY0 426 aa14.22□□□□□ -0.13
RFFL-211ENST00000584541 C3orf56Q8N813 242 aa14.22□□□□□ -0.13
RFFL-211ENST00000584541 SLC35E1Q96K37 410 aa14.22□□□□□ -0.13
RFFL-211ENST00000584541 CITED2Q99967 270 aaPredicted RBP14.22□□□□□ -0.13
RFFL-211ENST00000584541 GAR1Q9NY12 217 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms