RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 ST3GAL6Q9Y274 331 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 MED31Q9Y3C7 131 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 IER3IP1Q9Y5U9 82 aa1.56□□□□□ -2.16
VAPA-206ENST00000583475 IGKV1-27A0A075B6S5 117 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 IGKV1-9A0A0C4DH69 117 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 ZNF816-ZNF321PA0A0X1KG74 233 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 A0A1W2PQL4 384 aaPredicted RBP1.55□□□□□ -2.16
VAPA-206ENST00000583475 OR4C45A6NMZ5 311 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 E7EQL1 145 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 ATP6V1G2-DDX39BF2Z307 99 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 G3V2T6 193 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 H0YJW9 148 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 H0YJX3 145 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 K7EN84 100 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 M0R036 132 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 PIN1P1O15428 100 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 DENRO43583 198 aaKnown RBP1.55□□□□□ -2.16
VAPA-206ENST00000583475 ENTPD6O75354 484 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 ADAP1O75689 374 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 BRI3O95415 125 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 PTHP01270 115 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 IFNA14P01570 189 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 TTRP02766 147 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 ARG1P05089 322 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 RPSAP08865 295 aaKnown RBP1.55□□□□□ -2.16
VAPA-206ENST00000583475 CST2P09228 141 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 P0C880 135 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 HLA-GP17693 338 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 ALOX5APP20292 161 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 RAB5AP20339 215 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 CCL1P22362 96 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 CRHBPP24387 322 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 FKBP2P26885 142 aaKnown RBP1.55□□□□□ -2.16
VAPA-206ENST00000583475 SSTR5P35346 364 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 MPV17P39210 176 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 ZNF121P58317 390 aaPredicted RBP1.55□□□□□ -2.16
VAPA-206ENST00000583475 COPZ1P61923 177 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 LSM6P62312 80 aaKnown RBP1.55□□□□□ -2.16
VAPA-206ENST00000583475 RPL31P62899 125 aaKnown RBP1.55□□□□□ -2.16
VAPA-206ENST00000583475 PAFAH1B2P68402 229 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 GLO1Q04760 184 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 BSPH1Q075Z2 132 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 ST3GAL4Q11206 333 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 INSL4Q14641 139 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 OR8B8Q15620 311 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 SSX1Q16384 188 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 TAF9Q16594 264 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 BSXQ3C1V8 233 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 PDZD11Q5EBL8 140 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 PABPC1L2AQ5JQF8 200 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 RBM48Q5RL73 367 aaKnown RBP1.55□□□□□ -2.16
VAPA-206ENST00000583475 TIMM23BQ5SRD1 257 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 CLVS2Q5SYC1 327 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 C6orf52Q5T4I8 152 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 NXNL2Q5VZ03 156 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 TMEM42Q69YG0 159 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 CASP12Q6UXS9 341 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 IZUMO2Q6UXV1 221 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 C12orf54Q6X4T0 127 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 AAED1Q7RTV5 226 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 MRPL52Q86TS9 123 aaKnown RBP1.55□□□□□ -2.16
VAPA-206ENST00000583475 SLC22A24Q8N4F4 322 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 PACRGLQ8N7B6 248 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 ST20-AS1Q8NBB2 130 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 OR51A4Q8NGJ6 313 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 OR6N1Q8NGY5 312 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 OTOSQ8NHW6 89 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 GNPDA2Q8TDQ7 276 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 ZCCHC13Q8WW36 166 aaKnown RBP1.55□□□□□ -2.16
VAPA-206ENST00000583475 CYGBQ8WWM9 190 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 LZICQ8WZA0 190 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 RORBQ92753 470 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 SLC25A46Q96AG3 418 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 ZMYND19Q96E35 227 aaPredicted RBP1.55□□□□□ -2.16
VAPA-206ENST00000583475 ZNF488Q96MN9 340 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 RDH12Q96NR8 316 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 SCGB3A2Q96PL1 93 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 ERMAPQ96PL5 475 aaPredicted RBP1.55□□□□□ -2.16
VAPA-206ENST00000583475 TEAD3Q99594 435 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 TIMM17AQ99595 171 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 TSNAXQ99598 290 aaKnown RBP1.55□□□□□ -2.16
VAPA-206ENST00000583475 RSG1Q9BU20 258 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 TSSK6Q9BXA6 273 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 PARD6GQ9BYG4 376 aaPredicted RBP1.55□□□□□ -2.16
VAPA-206ENST00000583475 MRPS26Q9BYN8 205 aaKnown RBP1.55□□□□□ -2.16
VAPA-206ENST00000583475 REEP1Q9H902 201 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 KCNJ16Q9NPI9 418 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 IFT46Q9NQC8 304 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 PLEKHJ1Q9NW61 149 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 RHBDL2Q9NX52 303 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 PAQR5Q9NXK6 330 aaPredicted RBP1.55□□□□□ -2.16
VAPA-206ENST00000583475 DNAJC27Q9NZQ0 273 aa1.55□□□□□ -2.16
VAPA-206ENST00000583475 MCTS1Q9ULC4 181 aaKnown RBP1.55□□□□□ -2.16
VAPA-206ENST00000583475 TENM3Q9P273 2699 aa1.54□□□□□ -2.16
VAPA-206ENST00000583475 IGKV1-12A0A0C4DH73 117 aa1.54□□□□□ -2.16
VAPA-206ENST00000583475 LOC100130705A0A1B0GUX0 176 aa1.54□□□□□ -2.16
VAPA-206ENST00000583475 A0A1W2PRG6 482 aa1.54□□□□□ -2.16
VAPA-206ENST00000583475 ISPDA4D126 451 aa1.54□□□□□ -2.16
VAPA-206ENST00000583475 EEF1E1-BLOC1S5C9J1V9 151 aa1.54□□□□□ -2.16
VAPA-206ENST00000583475 SMKR1H3BMG3 65 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms