RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 IL18BPO95998 194 aa13.69□□□□□ -0.22
ERBB2-214ENST00000583038 MYOD1P15172 320 aa13.69□□□□□ -0.22
ERBB2-214ENST00000583038 OR4X2Q8NGF9 303 aa13.69□□□□□ -0.22
ERBB2-214ENST00000583038 ASCL2Q99929 193 aa13.69□□□□□ -0.22
ERBB2-214ENST00000583038 PF4P02776 101 aa13.68□□□□□ -0.22
ERBB2-214ENST00000583038 PRCDQ00LT1 54 aa13.68□□□□□ -0.22
ERBB2-214ENST00000583038 CD69Q07108 199 aa13.68□□□□□ -0.22
ERBB2-214ENST00000583038 FAM166AQ6J272 317 aa13.68□□□□□ -0.22
ERBB2-214ENST00000583038 TCF23Q7RTU1 214 aa13.68□□□□□ -0.22
ERBB2-214ENST00000583038 WDR83OSQ9Y284 106 aa13.68□□□□□ -0.22
ERBB2-214ENST00000583038 DOCK4Q8N1I0 1966 aa13.68□□□□□ -0.22
ERBB2-214ENST00000583038 IGHV3OR16-13A0A075B7E8 117 aa13.68□□□□□ -0.22
ERBB2-214ENST00000583038 IGHV3-74A0A0B4J1X5 117 aa13.68□□□□□ -0.22
ERBB2-214ENST00000583038 CCL3L1P16619 93 aa13.68□□□□□ -0.22
ERBB2-214ENST00000583038 Q9H3A6 140 aa13.68□□□□□ -0.22
ERBB2-214ENST00000583038 C7orf69Q9H7B7 122 aa13.68□□□□□ -0.22
ERBB2-214ENST00000583038 FGF16O43320 207 aa13.68□□□□□ -0.22
ERBB2-214ENST00000583038 MST1P26927 711 aa13.68□□□□□ -0.22
ERBB2-214ENST00000583038 DUTP33316 252 aaKnown RBP13.68□□□□□ -0.22
ERBB2-214ENST00000583038 TIMP3P35625 211 aa13.68□□□□□ -0.22
ERBB2-214ENST00000583038 ORMDL3Q8N138 153 aa13.68□□□□□ -0.22
ERBB2-214ENST00000583038 SLC17A3O00476 420 aa13.68□□□□□ -0.22
ERBB2-214ENST00000583038 RPL23P62829 140 aaKnown RBP13.68□□□□□ -0.22
ERBB2-214ENST00000583038 TNFRSF18Q9Y5U5 241 aa13.68□□□□□ -0.22
ERBB2-214ENST00000583038 H7C2G1 150 aa13.67□□□□□ -0.22
ERBB2-214ENST00000583038 HAX1O00165 279 aa13.67□□□□□ -0.22
ERBB2-214ENST00000583038 OTX1P32242 354 aaPredicted RBP13.67□□□□□ -0.22
ERBB2-214ENST00000583038 ZNF324BQ6AW86 544 aaPredicted RBP13.67□□□□□ -0.22
ERBB2-214ENST00000583038 TTC9CQ8N5M4 171 aa13.67□□□□□ -0.22
ERBB2-214ENST00000583038 FER1L6-AS1Q8NA97 138 aa13.67□□□□□ -0.22
ERBB2-214ENST00000583038 OSTCQ9NRP0 149 aa13.67□□□□□ -0.22
ERBB2-214ENST00000583038 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.67□□□□□ -0.22
ERBB2-214ENST00000583038 LHFPL1Q86WI0 220 aa13.67□□□□□ -0.22
ERBB2-214ENST00000583038 ARHGEF17Q96PE2 2063 aaPredicted RBP13.67□□□□□ -0.22
ERBB2-214ENST00000583038 IGHV3OR16-10A0A075B7F0 116 aa13.67□□□□□ -0.22
ERBB2-214ENST00000583038 ZNF600Q6ZNG1 722 aa13.67□□□□□ -0.22
ERBB2-214ENST00000583038 FABP5P3A8MUU1 101 aa13.67□□□□□ -0.22
ERBB2-214ENST00000583038 SRRM5B3KS81 715 aa13.67□□□□□ -0.22
ERBB2-214ENST00000583038 M0R381 172 aa13.67□□□□□ -0.22
ERBB2-214ENST00000583038 ABCA1O95477 2261 aa13.66□□□□□ -0.22
ERBB2-214ENST00000583038 H0YIZ8 118 aa13.66□□□□□ -0.22
ERBB2-214ENST00000583038 TCRBV4S1A1TA0A5B7 111 aa13.66□□□□□ -0.22
ERBB2-214ENST00000583038 APOHP02749 345 aaPredicted RBP13.66□□□□□ -0.22
ERBB2-214ENST00000583038 MBD3L1Q8WWY6 194 aa13.66□□□□□ -0.22
ERBB2-214ENST00000583038 PEF1Q9UBV8 284 aaKnown RBP13.66□□□□□ -0.22
ERBB2-214ENST00000583038 TBL2Q9Y4P3 447 aaKnown RBP13.66□□□□□ -0.22
ERBB2-214ENST00000583038 PDCD11Q14690 1871 aaKnown RBP13.66□□□□□ -0.22
ERBB2-214ENST00000583038 CHD5Q8TDI0 1954 aa13.66□□□□□ -0.22
ERBB2-214ENST00000583038 NUP37Q8NFH4 326 aa13.66□□□□□ -0.22
ERBB2-214ENST00000583038 PARD6GQ9BYG4 376 aaPredicted RBP13.66□□□□□ -0.22
ERBB2-214ENST00000583038 NPFFR1Q9GZQ6 430 aa13.66□□□□□ -0.22
ERBB2-214ENST00000583038 IGHV1-18A0A0C4DH31 117 aa13.66□□□□□ -0.22
ERBB2-214ENST00000583038 C9JCJ5 164 aa13.66□□□□□ -0.22
ERBB2-214ENST00000583038 HOXA5P20719 270 aa13.65□□□□□ -0.22
ERBB2-214ENST00000583038 SUMO2P61956 95 aaKnown RBP13.65□□□□□ -0.22
ERBB2-214ENST00000583038 RNF125Q96EQ8 232 aa13.65□□□□□ -0.22
ERBB2-214ENST00000583038 PRDM13Q9H4Q3 707 aa13.65□□□□□ -0.22
ERBB2-214ENST00000583038 ZNF257Q9Y2Q1 563 aa13.65□□□□□ -0.22
ERBB2-214ENST00000583038 NABP1Q96AH0 204 aa13.65□□□□□ -0.22
ERBB2-214ENST00000583038 RPUSD1Q9UJJ7 312 aaKnown RBP13.65□□□□□ -0.22
ERBB2-214ENST00000583038 GGNQ86UU5 652 aa13.65□□□□□ -0.22
ERBB2-214ENST00000583038 GFI1Q99684 422 aa13.65□□□□□ -0.22
ERBB2-214ENST00000583038 PLSCR4Q9NRQ2 329 aa13.65□□□□□ -0.22
ERBB2-214ENST00000583038 GREB1Q4ZG55 1949 aa13.65□□□□□ -0.22
ERBB2-214ENST00000583038 EFNA2O43921 213 aa13.65□□□□□ -0.22
ERBB2-214ENST00000583038 CD59P13987 128 aa13.65□□□□□ -0.22
ERBB2-214ENST00000583038 CLEC19AQ6UXS0 136 aa13.65□□□□□ -0.22
ERBB2-214ENST00000583038 TMEM101Q96IK0 257 aa13.65□□□□□ -0.22
ERBB2-214ENST00000583038 ALKBH7Q9BT30 221 aaPredicted RBP13.65□□□□□ -0.22
ERBB2-214ENST00000583038 PEMTQ9UBM1 199 aa13.64□□□□□ -0.23
ERBB2-214ENST00000583038 FREM3P0C091 2139 aa13.64□□□□□ -0.23
ERBB2-214ENST00000583038 SMIM13P0DJ93 91 aa13.64□□□□□ -0.23
ERBB2-214ENST00000583038 TMEM170BQ5T4T1 132 aa13.64□□□□□ -0.23
ERBB2-214ENST00000583038 SPRR3Q9UBC9 169 aa13.64□□□□□ -0.23
ERBB2-214ENST00000583038 ROS1P08922 2347 aa13.64□□□□□ -0.23
ERBB2-214ENST00000583038 TMEM160Q9NX00 188 aa13.64□□□□□ -0.23
ERBB2-214ENST00000583038 IGHV3-49A0A0A0MS15 119 aa13.64□□□□□ -0.23
ERBB2-214ENST00000583038 SCGB3A1Q96QR1 104 aa13.64□□□□□ -0.23
ERBB2-214ENST00000583038 LOC102724200A0A096LPH7 203 aaPredicted RBP13.63□□□□□ -0.23
ERBB2-214ENST00000583038 A0A0A6YYD4 124 aa13.63□□□□□ -0.23
ERBB2-214ENST00000583038 HIGD1CA8MV81 97 aa13.63□□□□□ -0.23
ERBB2-214ENST00000583038 LDLRAD4O15165 306 aa13.63□□□□□ -0.23
ERBB2-214ENST00000583038 IGKV3-20P01619 116 aa13.63□□□□□ -0.23
ERBB2-214ENST00000583038 PPBPP02775 128 aa13.63□□□□□ -0.23
ERBB2-214ENST00000583038 WFIKKN1Q96NZ8 548 aa13.63□□□□□ -0.23
ERBB2-214ENST00000583038 GATA2P23769 480 aaPredicted RBP13.63□□□□□ -0.23
ERBB2-214ENST00000583038 TMEM170AQ8WVE7 144 aa13.63□□□□□ -0.23
ERBB2-214ENST00000583038 EPDR1Q9UM22 224 aa13.63□□□□□ -0.23
ERBB2-214ENST00000583038 F11RQ9Y624 299 aaKnown RBP13.63□□□□□ -0.23
ERBB2-214ENST00000583038 IGKV1-12A0A0C4DH73 117 aa13.63□□□□□ -0.23
ERBB2-214ENST00000583038 DNAL4O96015 105 aa13.63□□□□□ -0.23
ERBB2-214ENST00000583038 TGFAP01135 160 aa13.63□□□□□ -0.23
ERBB2-214ENST00000583038 IGKV1D-12P01611 117 aa13.63□□□□□ -0.23
ERBB2-214ENST00000583038 ATOH7Q8N100 152 aa13.63□□□□□ -0.23
ERBB2-214ENST00000583038 ZNF418Q8TF45 676 aaPredicted RBP13.63□□□□□ -0.23
ERBB2-214ENST00000583038 C2orf88Q9BSF0 95 aa13.63□□□□□ -0.23
ERBB2-214ENST00000583038 PINLYPA6NC86 204 aa13.63□□□□□ -0.23
ERBB2-214ENST00000583038 THBDP07204 575 aa13.63□□□□□ -0.23
ERBB2-214ENST00000583038 IGHV1-46P01743 117 aa13.62□□□□□ -0.23
ERBB2-214ENST00000583038 TRAV8-6A0A0B4J262 113 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms