RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 CST7O76096 145 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 IGLV1-47P01700 117 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 OR9G9P0C7N8 305 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 DYNLT3P51808 116 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 CLINT1Q14677 625 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 ATP6V1FQ16864 119 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 AARDQ4LEZ3 155 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 CCDC144NLQ6NUI1 221 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 VKORC1L1Q8N0U8 176 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 TMEM217Q8N7C4 229 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 ST6GALNAC6Q969X2 333 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 PINX1Q96BK5 328 aaKnown RBP8.15□□□□□ -1.1
SS18-221ENST00000582448 GNPNAT1Q96EK6 184 aaPredicted RBP8.15□□□□□ -1.1
SS18-221ENST00000582448 ATP5SQ99766 215 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 COMMD5Q9GZQ3 224 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 SIRT7Q9NRC8 400 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 BET1LQ9NYM9 111 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 ZNRD1Q9P1U0 126 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 DPM3Q9P2X0 92 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 FOXA2Q9Y261 457 aaPredicted RBP8.15□□□□□ -1.1
SS18-221ENST00000582448 ZNF257Q9Y2Q1 563 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 OOSP1A8MZH6 123 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 B5MCH6 92 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 UPK2O00526 184 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 KBTBD11O94819 623 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 TMEM50AO95807 157 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 IFNA10P01566 189 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 IGKV1-16P04430 117 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 OR8U8P0C7N1 319 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 SEC11BP0C7V7 166 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 PAX9P55771 341 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 HSPE1P61604 102 aaKnown RBP8.14□□□□□ -1.11
SS18-221ENST00000582448 RAB11AP62491 216 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 TMEM267Q0VDI3 215 aaPredicted RBP8.14□□□□□ -1.11
SS18-221ENST00000582448 VMO1Q7Z5L0 202 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 SLC7A5P1Q8MH63 180 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 Q8N7P7 452 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 OR10P1Q8NGE3 313 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 OR5B3Q8NH48 314 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 TMED6Q8WW62 240 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 SSMEM1Q8WWF3 244 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 HINT2Q9BX68 163 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 PRDM13Q9H4Q3 707 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 PLEKHA3Q9HB20 300 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 OR51B2Q9Y5P1 312 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 KIAA2026Q5HYC2 2103 aa8.14□□□□□ -1.11
SS18-221ENST00000582448 IGHV1-3A0A0C4DH29 117 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 CENPVL3A0A0U1RRI6 287 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 LINC00862A6NCI5 91 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 ACTL6BO94805 426 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 IGHV4-59P01825 116 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 METTL15P1P0C7V9 234 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 SAA1P0DJI8 122 aaPredicted RBP8.13□□□□□ -1.11
SS18-221ENST00000582448 RAB5CP51148 216 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 F2RL1P55085 397 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 ATP5IP56385 69 aaPredicted RBP8.13□□□□□ -1.11
SS18-221ENST00000582448 PROK1P58294 105 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 BPIFB3P59826 476 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 RPL8P62917 257 aaKnown RBP8.13□□□□□ -1.11
SS18-221ENST00000582448 BLOC1S1P78537 153 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 SLC38A11Q08AI6 406 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 TPTE2P1Q5T6R2 138 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 MINOS1Q5TGZ0 78 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 OR8G2PQ6IF36 304 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 TMEM86BQ8N661 226 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 HSD17B11Q8NBQ5 300 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 OR4P4Q8NGL7 312 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 RNF5Q99942 180 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 GINS3Q9BRX5 216 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 TMEM14BQ9NUH8 114 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 TCF19Q9Y242 345 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 DMRT1Q9Y5R6 373 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 MINOS1-NBL1R4GNA1 71 aa8.13□□□□□ -1.11
SS18-221ENST00000582448 A0A1W2PN81 502 aa8.12□□□□□ -1.11
SS18-221ENST00000582448 ZNF705EA8MWA4 302 aaPredicted RBP8.12□□□□□ -1.11
SS18-221ENST00000582448 PRH1P02810 166 aa8.12□□□□□ -1.11
SS18-221ENST00000582448 CHRNA7P36544 502 aa8.12□□□□□ -1.11
SS18-221ENST00000582448 SNCAP37840 140 aa8.12□□□□□ -1.11
SS18-221ENST00000582448 SPINK9Q5DT21 86 aa8.12□□□□□ -1.11
SS18-221ENST00000582448 FAM74A1Q5RGS3 127 aa8.12□□□□□ -1.11
SS18-221ENST00000582448 TMEM14EPQ6UXP3 125 aa8.12□□□□□ -1.11
SS18-221ENST00000582448 Q6ZSV7 163 aa8.12□□□□□ -1.11
SS18-221ENST00000582448 COMMD7Q86VX2 200 aa8.12□□□□□ -1.11
SS18-221ENST00000582448 PUSL1Q8N0Z8 303 aaKnown RBP8.12□□□□□ -1.11
SS18-221ENST00000582448 STPG2Q8N412 459 aa8.12□□□□□ -1.11
SS18-221ENST00000582448 TMEM167AQ8TBQ9 72 aa8.12□□□□□ -1.11
SS18-221ENST00000582448 SAT2Q96F10 170 aaPredicted RBP8.12□□□□□ -1.11
SS18-221ENST00000582448 NEU1Q99519 415 aa8.12□□□□□ -1.11
SS18-221ENST00000582448 TBL2Q9Y4P3 447 aaKnown RBP8.12□□□□□ -1.11
SS18-221ENST00000582448 TRAV3A0A0B4J244 114 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 A0A0U1RQK1 487 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 RPS10-NUDT3A0A1W2PQS6 291 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 ODF3BA8MYP8 253 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 UMAD1C9J7I0 102 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 LY6LH3BQJ8 138 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 IFNA4P05014 189 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 NMBP08949 121 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 CD1BP29016 333 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 MAS1LP35410 378 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 UBE2E1P51965 193 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms