RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 TMEM229BQ8NBD8 167 aa10.76□□□□□ -0.69
SMARCE1-216ENST00000580419 MRGPRFQ96AM1 343 aa10.76□□□□□ -0.69
SMARCE1-216ENST00000580419 GINS3Q9BRX5 216 aa10.76□□□□□ -0.69
SMARCE1-216ENST00000580419 C6orf62Q9GZU0 229 aaPredicted RBP10.76□□□□□ -0.69
SMARCE1-216ENST00000580419 KLK11Q9UBX7 282 aa10.76□□□□□ -0.69
SMARCE1-216ENST00000580419 ALMS1Q8TCU4 4167 aa10.75□□□□□ -0.69
SMARCE1-216ENST00000580419 HYDINQ4G0P3 5121 aa10.75□□□□□ -0.69
SMARCE1-216ENST00000580419 IGHV3-35A0A0C4DH35 117 aa10.75□□□□□ -0.69
SMARCE1-216ENST00000580419 CHEK1O14757 476 aa10.75□□□□□ -0.69
SMARCE1-216ENST00000580419 UCP1P25874 307 aa10.75□□□□□ -0.69
SMARCE1-216ENST00000580419 SUB1P53999 127 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMARCE1-216ENST00000580419 PIGPP57054 158 aa10.75□□□□□ -0.69
SMARCE1-216ENST00000580419 TAS2R19P59542 299 aa10.75□□□□□ -0.69
SMARCE1-216ENST00000580419 SURF2Q15527 256 aaPredicted RBP10.75□□□□□ -0.69
SMARCE1-216ENST00000580419 GPR107Q5VW38 600 aa10.75□□□□□ -0.69
SMARCE1-216ENST00000580419 CCDC71LQ8N9Z2 235 aa10.75□□□□□ -0.69
SMARCE1-216ENST00000580419 RNF183Q96D59 192 aa10.75□□□□□ -0.69
SMARCE1-216ENST00000580419 TRAV14DV4A0A0A6YYC5 116 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 A0A0B4J293 547 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 C3orf85A0A1B0GTC6 90 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 GABARAPH6UMI1 98 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 SPRY2O43597 315 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 GNG7O60262 68 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 DFFBO76075 338 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 MT-CO2P00403 227 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 IGKV1-5P01602 117 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 CD3DP04234 171 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 SNCAP37840 140 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 MEF2DQ14814 521 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 BSXQ3C1V8 233 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 TMEM217Q8N7C4 229 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 STPG3Q8N7X2 389 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 UBAC2Q8NBM4 344 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 TMEM116Q8NCL8 245 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 DUSP18Q8NEJ0 188 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 OR52E5Q8NH55 327 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 OR52I2Q8NH67 350 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 ABHD1Q96SE0 405 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 BCL7BQ9BQE9 202 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 C20orf24Q9BUV8 137 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 RHPN1-AS1Q9BWJ2 59 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 VSIRQ9H7M9 311 aa10.74□□□□□ -0.69
SMARCE1-216ENST00000580419 FAM25AB3EWG3 89 aa10.73□□□□□ -0.69
SMARCE1-216ENST00000580419 FAM25CB3EWG5 89 aa10.73□□□□□ -0.69
SMARCE1-216ENST00000580419 FAM25GB3EWG6 89 aa10.73□□□□□ -0.69
SMARCE1-216ENST00000580419 M0QYG6 137 aa10.73□□□□□ -0.69
SMARCE1-216ENST00000580419 CTDSPLO15194 276 aa10.73□□□□□ -0.69
SMARCE1-216ENST00000580419 CTSDP07339 412 aaPredicted RBP10.73□□□□□ -0.69
SMARCE1-216ENST00000580419 SMIM18P0DKX4 95 aa10.73□□□□□ -0.69
SMARCE1-216ENST00000580419 PAFAH1B2P68402 229 aa10.73□□□□□ -0.69
SMARCE1-216ENST00000580419 ZNF600Q6ZNG1 722 aa10.73□□□□□ -0.69
SMARCE1-216ENST00000580419 GATAD1Q8WUU5 269 aa10.73□□□□□ -0.69
SMARCE1-216ENST00000580419 MISP3Q96FF7 219 aa10.73□□□□□ -0.69
SMARCE1-216ENST00000580419 TP53RKQ96S44 253 aa10.73□□□□□ -0.69
SMARCE1-216ENST00000580419 RNF2Q99496 336 aa10.73□□□□□ -0.69
SMARCE1-216ENST00000580419 MAP6D1Q9H9H5 199 aa10.73□□□□□ -0.69
SMARCE1-216ENST00000580419 COPZ2Q9P299 210 aa10.73□□□□□ -0.69
SMARCE1-216ENST00000580419 EXTL2Q9UBQ6 330 aa10.73□□□□□ -0.69
SMARCE1-216ENST00000580419 NUPR2A6NF83 97 aa10.72□□□□□ -0.69
SMARCE1-216ENST00000580419 SCGB2A1O75556 95 aa10.72□□□□□ -0.69
SMARCE1-216ENST00000580419 CDS2O95674 445 aa10.72□□□□□ -0.69
SMARCE1-216ENST00000580419 PGAM2P15259 253 aa10.72□□□□□ -0.69
SMARCE1-216ENST00000580419 AKR1C2P52895 323 aa10.72□□□□□ -0.69
SMARCE1-216ENST00000580419 RRNAD1Q96FB5 475 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-216ENST00000580419 PDCD10Q9BUL8 212 aa10.72□□□□□ -0.69
SMARCE1-216ENST00000580419 TMEM231Q9H6L2 316 aa10.72□□□□□ -0.69
SMARCE1-216ENST00000580419 EPPK1P58107 5090 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-216ENST00000580419 ST8SIA3O43173 380 aa10.71□□□□□ -0.69
SMARCE1-216ENST00000580419 RAB3DO95716 219 aa10.71□□□□□ -0.69
SMARCE1-216ENST00000580419 TMEM50AO95807 157 aa10.71□□□□□ -0.69
SMARCE1-216ENST00000580419 ALDH3B2P48448 385 aa10.71□□□□□ -0.69
SMARCE1-216ENST00000580419 STEAP1BQ6NZ63 245 aa10.71□□□□□ -0.69
SMARCE1-216ENST00000580419 TOMM20LQ6UXN7 152 aa10.71□□□□□ -0.69
SMARCE1-216ENST00000580419 SLC35G3Q8N808 338 aa10.71□□□□□ -0.69
SMARCE1-216ENST00000580419 OR4X1Q8NH49 305 aa10.71□□□□□ -0.69
SMARCE1-216ENST00000580419 SMIM4Q8WVI0 70 aa10.71□□□□□ -0.69
SMARCE1-216ENST00000580419 MRPS26Q9BYN8 205 aaKnown RBP10.71□□□□□ -0.69
SMARCE1-216ENST00000580419 TMEM222Q9H0R3 208 aa10.71□□□□□ -0.69
SMARCE1-216ENST00000580419 TRAV30A0A087WSZ9 112 aa10.7□□□□□ -0.7
SMARCE1-216ENST00000580419 IGHV3-21A0A0B4J1V1 117 aa10.7□□□□□ -0.7
SMARCE1-216ENST00000580419 PIGBOS1A0A0B4J2F0 54 aa10.7□□□□□ -0.7
SMARCE1-216ENST00000580419 A0A1W2PS18 150 aa10.7□□□□□ -0.7
SMARCE1-216ENST00000580419 YIF1AO95070 293 aa10.7□□□□□ -0.7
SMARCE1-216ENST00000580419 IFNA17P01571 189 aa10.7□□□□□ -0.7
SMARCE1-216ENST00000580419 RNASE2P10153 161 aaKnown RBP10.7□□□□□ -0.7
SMARCE1-216ENST00000580419 SPCS3P61009 180 aa10.7□□□□□ -0.7
SMARCE1-216ENST00000580419 DHODHQ02127 395 aa10.7□□□□□ -0.7
SMARCE1-216ENST00000580419 LYG2Q86SG7 212 aa10.7□□□□□ -0.7
SMARCE1-216ENST00000580419 OR13C8Q8NGS7 320 aa10.7□□□□□ -0.7
SMARCE1-216ENST00000580419 CSTL1Q9H114 145 aa10.7□□□□□ -0.7
SMARCE1-216ENST00000580419 ZFAND3Q9H8U3 227 aa10.7□□□□□ -0.7
SMARCE1-216ENST00000580419 BIRC6Q9NR09 4857 aa10.69□□□□□ -0.7
SMARCE1-216ENST00000580419 CLN5O75503 358 aa10.69□□□□□ -0.7
SMARCE1-216ENST00000580419 HTR2BP41595 481 aa10.69□□□□□ -0.7
SMARCE1-216ENST00000580419 TMEM41BQ5BJD5 291 aa10.69□□□□□ -0.7
SMARCE1-216ENST00000580419 GLYATL2Q8WU03 294 aa10.69□□□□□ -0.7
SMARCE1-216ENST00000580419 RAB2BQ8WUD1 216 aa10.69□□□□□ -0.7
SMARCE1-216ENST00000580419 RBPMSQ93062 196 aaKnown RBP10.69□□□□□ -0.7
SMARCE1-216ENST00000580419 IL22RA2Q969J5 263 aa10.69□□□□□ -0.7
SMARCE1-216ENST00000580419 GRAMD2BQ96HH9 432 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms