RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 IGHV3OR16-8A0A075B7F1 116 aa10.19□□□□□ -0.78
GGA3-208ENST00000579743 A0A0J9YWU9 116 aa10.19□□□□□ -0.78
GGA3-208ENST00000579743 B3GALNT1O75752 331 aa10.19□□□□□ -0.78
GGA3-208ENST00000579743 ATF4P18848 351 aaPredicted RBP10.19□□□□□ -0.78
GGA3-208ENST00000579743 ELK1P19419 428 aa10.19□□□□□ -0.78
GGA3-208ENST00000579743 RPL5P46777 297 aaKnown RBP10.19□□□□□ -0.78
GGA3-208ENST00000579743 ALDH3B2P48448 385 aa10.19□□□□□ -0.78
GGA3-208ENST00000579743 RND3P61587 244 aa10.19□□□□□ -0.78
GGA3-208ENST00000579743 NCS1P62166 190 aa10.19□□□□□ -0.78
GGA3-208ENST00000579743 PMS2P11Q13670 270 aa10.19□□□□□ -0.78
GGA3-208ENST00000579743 LYG2Q86SG7 212 aa10.19□□□□□ -0.78
GGA3-208ENST00000579743 RNF183Q96D59 192 aa10.19□□□□□ -0.78
GGA3-208ENST00000579743 RRNAD1Q96FB5 475 aaKnown RBP10.19□□□□□ -0.78
GGA3-208ENST00000579743 NXF2Q9GZY0 626 aaKnown RBP10.19□□□□□ -0.78
GGA3-208ENST00000579743 RBM38Q9H0Z9 239 aaKnown RBP10.19□□□□□ -0.78
GGA3-208ENST00000579743 COPZ2Q9P299 210 aa10.19□□□□□ -0.78
GGA3-208ENST00000579743 DBX1A6NMT0 343 aa10.18□□□□□ -0.78
GGA3-208ENST00000579743 F8W735 103 aaPredicted RBP10.18□□□□□ -0.78
GGA3-208ENST00000579743 I3L2K1 104 aa10.18□□□□□ -0.78
GGA3-208ENST00000579743 M0QYG6 137 aa10.18□□□□□ -0.78
GGA3-208ENST00000579743 DNASE2O00115 360 aaPredicted RBP10.18□□□□□ -0.78
GGA3-208ENST00000579743 CHEK1O14757 476 aa10.18□□□□□ -0.78
GGA3-208ENST00000579743 RPL35AP18077 110 aaKnown RBP10.18□□□□□ -0.78
GGA3-208ENST00000579743 PIGPP57054 158 aa10.18□□□□□ -0.78
GGA3-208ENST00000579743 TRIM16LQ309B1 348 aa10.18□□□□□ -0.78
GGA3-208ENST00000579743 ODF3L2Q3SX64 289 aa10.18□□□□□ -0.78
GGA3-208ENST00000579743 NARS2Q96I59 477 aaKnown RBP10.18□□□□□ -0.78
GGA3-208ENST00000579743 OR10C1Q96KK4 312 aa10.18□□□□□ -0.78
GGA3-208ENST00000579743 RNF2Q99496 336 aa10.18□□□□□ -0.78
GGA3-208ENST00000579743 MAP6D1Q9H9H5 199 aa10.18□□□□□ -0.78
GGA3-208ENST00000579743 IGKV3-7A0A075B6H7 116 aa10.17□□□□□ -0.78
GGA3-208ENST00000579743 C3orf85A0A1B0GTC6 90 aa10.17□□□□□ -0.78
GGA3-208ENST00000579743 A0A1W2PS18 150 aa10.17□□□□□ -0.78
GGA3-208ENST00000579743 MPTX1A8MV57 137 aa10.17□□□□□ -0.78
GGA3-208ENST00000579743 ZNF182P17025 639 aaPredicted RBP10.17□□□□□ -0.78
GGA3-208ENST00000579743 TFPI2P48307 235 aa10.17□□□□□ -0.78
GGA3-208ENST00000579743 HOXA1P49639 335 aaPredicted RBP10.17□□□□□ -0.78
GGA3-208ENST00000579743 RPL11P62913 178 aaKnown RBP10.17□□□□□ -0.78
GGA3-208ENST00000579743 GATAD1Q8WUU5 269 aa10.17□□□□□ -0.78
GGA3-208ENST00000579743 CSTL1Q9H114 145 aa10.17□□□□□ -0.78
GGA3-208ENST00000579743 EXTL2Q9UBQ6 330 aa10.17□□□□□ -0.78
GGA3-208ENST00000579743 ST8SIA3O43173 380 aa10.16□□□□□ -0.78
GGA3-208ENST00000579743 LY6G6CO95867 125 aa10.16□□□□□ -0.78
GGA3-208ENST00000579743 TAS2R19P59542 299 aa10.16□□□□□ -0.78
GGA3-208ENST00000579743 RNASE12Q5GAN4 147 aaKnown RBP10.16□□□□□ -0.78
GGA3-208ENST00000579743 CEMP1Q6PRD7 247 aaPredicted RBP10.16□□□□□ -0.78
GGA3-208ENST00000579743 ZNF600Q6ZNG1 722 aa10.16□□□□□ -0.78
GGA3-208ENST00000579743 TCF24Q7RTU0 167 aa10.16□□□□□ -0.78
GGA3-208ENST00000579743 TERB2Q8NHR7 220 aa10.16□□□□□ -0.78
GGA3-208ENST00000579743 NDUFA13Q9P0J0 144 aa10.16□□□□□ -0.78
GGA3-208ENST00000579743 KLK11Q9UBX7 282 aa10.16□□□□□ -0.78
GGA3-208ENST00000579743 MTFP1Q9UDX5 166 aa10.16□□□□□ -0.78
GGA3-208ENST00000579743 IGHV3-49A0A0A0MS15 119 aa10.15□□□□□ -0.78
GGA3-208ENST00000579743 INS-IGF2F8WCM5 200 aa10.15□□□□□ -0.78
GGA3-208ENST00000579743 DFFBO76075 338 aa10.15□□□□□ -0.78
GGA3-208ENST00000579743 RAB3DO95716 219 aa10.15□□□□□ -0.78
GGA3-208ENST00000579743 IGKV1-39P01597 117 aa10.15□□□□□ -0.78
GGA3-208ENST00000579743 IGHV3-48P01763 117 aa10.15□□□□□ -0.78
GGA3-208ENST00000579743 CD3DP04234 171 aa10.15□□□□□ -0.78
GGA3-208ENST00000579743 IGKV1D-39P04432 117 aa10.15□□□□□ -0.78
GGA3-208ENST00000579743 NPPCP23582 126 aa10.15□□□□□ -0.78
GGA3-208ENST00000579743 EIF2B2P49770 351 aaKnown RBP10.15□□□□□ -0.78
GGA3-208ENST00000579743 MRPS10P82664 201 aaKnown RBP10.15□□□□□ -0.78
GGA3-208ENST00000579743 SCGB2B2Q4G0G5 96 aa10.15□□□□□ -0.78
GGA3-208ENST00000579743 APRG1Q8IVJ8 170 aa10.15□□□□□ -0.78
GGA3-208ENST00000579743 FAM219AQ8IW50 185 aa10.15□□□□□ -0.78
GGA3-208ENST00000579743 MFFQ9GZY8 342 aa10.15□□□□□ -0.78
GGA3-208ENST00000579743 CACFD1Q9UGQ2 172 aa10.15□□□□□ -0.78
GGA3-208ENST00000579743 C14orf166Q9Y224 244 aaKnown RBP10.15□□□□□ -0.78
GGA3-208ENST00000579743 TRAV30A0A087WSZ9 112 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 TRAV2A0A0B4J234 112 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 RPS10-NUDT3A0A1W2PQS6 291 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 RGS5O15539 181 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 PI3P19957 117 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 OPRK1P41145 380 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 PPP5CP53041 499 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 SSBP1Q04837 148 aaKnown RBP10.14□□□□□ -0.79
GGA3-208ENST00000579743 MEF2DQ14814 521 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 SPINK9Q5DT21 86 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 TOMM20LQ6UXN7 152 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 GBGT1Q8N5D6 347 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 TMEM229BQ8NBD8 167 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 OR52I2Q8NH67 350 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 LINC00476Q8WZB0 136 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 TMEM230Q96A57 120 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 GRAMD2BQ96HH9 432 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 METTL26Q96S19 204 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 TP53RKQ96S44 253 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 RARRES2Q99969 163 aa10.14□□□□□ -0.79
GGA3-208ENST00000579743 PUS1Q9Y606 427 aaKnown RBP eCLIP10.14□□□□□ -0.79
GGA3-208ENST00000579743 TEX13DA0A0J9YY54 714 aaPredicted RBP10.13□□□□□ -0.79
GGA3-208ENST00000579743 DISC1C4P0D8 188 aa10.13□□□□□ -0.79
GGA3-208ENST00000579743 TMEM50AO95807 157 aa10.13□□□□□ -0.79
GGA3-208ENST00000579743 IFNA4P05014 189 aa10.13□□□□□ -0.79
GGA3-208ENST00000579743 ETV6P41212 452 aa10.13□□□□□ -0.79
GGA3-208ENST00000579743 STEAP1BQ6NZ63 245 aa10.13□□□□□ -0.79
GGA3-208ENST00000579743 LHFPL1Q86WI0 220 aa10.13□□□□□ -0.79
GGA3-208ENST00000579743 CENPSQ8N2Z9 138 aa10.13□□□□□ -0.79
GGA3-208ENST00000579743 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.13□□□□□ -0.79
GGA3-208ENST00000579743 RABL2AQ9UBK7 228 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms