RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 BSCL2Q96G97 398 aaPredicted RBP9.45□□□□□ -0.9
CDK5RAP3-213ENST00000579605 CMTM3Q96MX0 182 aa9.45□□□□□ -0.9
CDK5RAP3-213ENST00000579605 HINT2Q9BX68 163 aa9.45□□□□□ -0.9
CDK5RAP3-213ENST00000579605 YTHDF1Q9BYJ9 559 aaKnown RBP9.45□□□□□ -0.9
CDK5RAP3-213ENST00000579605 RNF167Q9H6Y7 350 aa9.45□□□□□ -0.9
CDK5RAP3-213ENST00000579605 IFT46Q9NQC8 304 aa9.45□□□□□ -0.9
CDK5RAP3-213ENST00000579605 TEX50A0A1B0GTY4 177 aa9.44□□□□□ -0.9
CDK5RAP3-213ENST00000579605 NDUFA4O00483 81 aa9.44□□□□□ -0.9
CDK5RAP3-213ENST00000579605 SERPINE2P07093 398 aa9.44□□□□□ -0.9
CDK5RAP3-213ENST00000579605 GIG44P09565 113 aaPredicted RBP9.44□□□□□ -0.9
CDK5RAP3-213ENST00000579605 WT1-ASQ06250 92 aa9.44□□□□□ -0.9
CDK5RAP3-213ENST00000579605 SPSB3Q6PJ21 355 aa9.44□□□□□ -0.9
CDK5RAP3-213ENST00000579605 TSPAN14Q8NG11 270 aa9.44□□□□□ -0.9
CDK5RAP3-213ENST00000579605 C21orf62Q9NYP8 219 aa9.44□□□□□ -0.9
CDK5RAP3-213ENST00000579605 EHFQ9NZC4 300 aa9.44□□□□□ -0.9
CDK5RAP3-213ENST00000579605 TBC1D24Q9ULP9 559 aa9.44□□□□□ -0.9
CDK5RAP3-213ENST00000579605 ZNF705EA8MWA4 302 aaPredicted RBP9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 F8W735 103 aaPredicted RBP9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 K7EMT4 169 aa9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 CHEK1O14757 476 aa9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 PGLYRP1O75594 196 aaPredicted RBP9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 SNAPC5O75971 98 aa9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 RLN1P04808 185 aa9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 F2RP25116 425 aa9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 GNRHRP30968 328 aa9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 PAFAH1B2P68402 229 aa9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 RNF212Q495C1 297 aa9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 Q56UQ5 140 aa9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 C6orf223Q8N319 242 aa9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 UBAC2Q8NBM4 344 aa9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 TMEM116Q8NCL8 245 aa9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 SCARB1Q8WTV0 552 aa9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 LSM10Q969L4 123 aaKnown RBP9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 ZNF2Q9BSG1 426 aaPredicted RBP9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 OR51B2Q9Y5P1 312 aa9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 F11RQ9Y624 299 aaKnown RBP9.43□□□□□ -0.9
CDK5RAP3-213ENST00000579605 IGHV7-4-1A0A0J9YVY3 117 aa9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 MARCH11A6NNE9 402 aa9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 DNASE2O00115 360 aaPredicted RBP9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 TMEM127O75204 238 aa9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 YIF1AO95070 293 aa9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 KRASP01116 189 aa9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 PMP2P02689 132 aa9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 C4BPBP20851 252 aa9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 G6PCP35575 357 aa9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 LPAR6P43657 344 aa9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 DHRS11Q6UWP2 260 aa9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 CMTM1Q8IZ96 169 aa9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 FCAMRQ8WWV6 532 aa9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 MOB3AQ96BX8 217 aa9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 S100A16Q96FQ6 103 aaKnown RBP9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 TMEM56Q96MV1 263 aa9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 C18orf15Q96N68 181 aa9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 ATP6V0BQ99437 205 aa9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 NDUFA4L2Q9NRX3 87 aa9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 NSG2Q9Y328 171 aa9.42□□□□□ -0.9
CDK5RAP3-213ENST00000579605 FAT1Q14517 4588 aa9.41□□□□□ -0.9
CDK5RAP3-213ENST00000579605 C15orf62A8K5M9 175 aa9.41□□□□□ -0.9
CDK5RAP3-213ENST00000579605 HTN3P15516 51 aa9.41□□□□□ -0.9
CDK5RAP3-213ENST00000579605 RFX2P48378 723 aa9.41□□□□□ -0.9
CDK5RAP3-213ENST00000579605 TAS2R46P59540 309 aa9.41□□□□□ -0.9
CDK5RAP3-213ENST00000579605 NEDD8Q15843 81 aa9.41□□□□□ -0.9
CDK5RAP3-213ENST00000579605 TCF24Q7RTU0 167 aa9.41□□□□□ -0.9
CDK5RAP3-213ENST00000579605 FAM24BQ8N5W8 94 aa9.41□□□□□ -0.9
CDK5RAP3-213ENST00000579605 OR5H2Q8NGV7 314 aa9.41□□□□□ -0.9
CDK5RAP3-213ENST00000579605 DGCR14Q96DF8 476 aaKnown RBP9.41□□□□□ -0.9
CDK5RAP3-213ENST00000579605 TMEM14BQ9NUH8 114 aa9.41□□□□□ -0.9
CDK5RAP3-213ENST00000579605 FKBP11Q9NYL4 201 aa9.41□□□□□ -0.9
CDK5RAP3-213ENST00000579605 PRNDQ9UKY0 176 aa9.41□□□□□ -0.9
CDK5RAP3-213ENST00000579605 K7EIM0 57 aa9.4□□□□□ -0.9
CDK5RAP3-213ENST00000579605 GPR31O00270 319 aa9.4□□□□□ -0.9
CDK5RAP3-213ENST00000579605 NUPL2O15504 423 aaKnown RBP9.4□□□□□ -0.9
CDK5RAP3-213ENST00000579605 ATP6V1G2O95670 118 aa9.4□□□□□ -0.9
CDK5RAP3-213ENST00000579605 EMP1P54849 157 aa9.4□□□□□ -0.9
CDK5RAP3-213ENST00000579605 RPL11P62913 178 aaKnown RBP9.4□□□□□ -0.9
CDK5RAP3-213ENST00000579605 RELQ04864 619 aaPredicted RBP9.4□□□□□ -0.9
CDK5RAP3-213ENST00000579605 TMEM69Q5SWH9 247 aa9.4□□□□□ -0.9
CDK5RAP3-213ENST00000579605 CROCCP3Q8IVE0 287 aa9.4□□□□□ -0.9
CDK5RAP3-213ENST00000579605 CADM3Q8N126 398 aa9.4□□□□□ -0.9
CDK5RAP3-213ENST00000579605 TMED3Q9Y3Q3 217 aa9.4□□□□□ -0.9
CDK5RAP3-213ENST00000579605 AGRNO00468 2067 aa9.4□□□□□ -0.91
CDK5RAP3-213ENST00000579605 KNCNA6PVL3 124 aa9.39□□□□□ -0.91
CDK5RAP3-213ENST00000579605 S100GP29377 79 aa9.39□□□□□ -0.91
CDK5RAP3-213ENST00000579605 TAS2R20P59543 309 aa9.39□□□□□ -0.91
CDK5RAP3-213ENST00000579605 KRTAP10-2P60368 255 aa9.39□□□□□ -0.91
CDK5RAP3-213ENST00000579605 TMEM41BQ5BJD5 291 aa9.39□□□□□ -0.91
CDK5RAP3-213ENST00000579605 UBE2NLQ5JXB2 153 aa9.39□□□□□ -0.91
CDK5RAP3-213ENST00000579605 FAM90A2PQ658T7 463 aa9.39□□□□□ -0.91
CDK5RAP3-213ENST00000579605 MORN3Q6PF18 240 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP3-213ENST00000579605 TRPT1Q86TN4 253 aaKnown RBP9.39□□□□□ -0.91
CDK5RAP3-213ENST00000579605 OR6F1Q8NGZ6 308 aa9.39□□□□□ -0.91
CDK5RAP3-213ENST00000579605 OR1P1Q8NH06 330 aa9.39□□□□□ -0.91
CDK5RAP3-213ENST00000579605 MISP3Q96FF7 219 aa9.39□□□□□ -0.91
CDK5RAP3-213ENST00000579605 TSC22D3Q99576 134 aa9.39□□□□□ -0.91
CDK5RAP3-213ENST00000579605 FXYD6Q9H0Q3 95 aa9.39□□□□□ -0.91
CDK5RAP3-213ENST00000579605 MS4A6AQ9H2W1 248 aa9.39□□□□□ -0.91
CDK5RAP3-213ENST00000579605 ANAPC10Q9UM13 185 aa9.39□□□□□ -0.91
CDK5RAP3-213ENST00000579605 IGHV3-66A0A0C4DH42 116 aa9.38□□□□□ -0.91
CDK5RAP3-213ENST00000579605 NBDYA0A0U1RRE5 68 aa9.38□□□□□ -0.91
CDK5RAP3-213ENST00000579605 J3QL48 77 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms