RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	PHLDA2	Q53GA4	152 aa		6.99	□□□□□ -1.29
MSI2-208	ENST00000579466	TPRA1	Q86W33	373 aa		6.99	□□□□□ -1.29
MSI2-208	ENST00000579466	CENPS	Q8N2Z9	138 aa		6.99	□□□□□ -1.29
MSI2-208	ENST00000579466	STXBP6	Q8NFX7	210 aa		6.99	□□□□□ -1.29
MSI2-208	ENST00000579466	OR5AP2	Q8NGF4	316 aa		6.99	□□□□□ -1.29
MSI2-208	ENST00000579466	OR1P1	Q8NH06	330 aa		6.99	□□□□□ -1.29
MSI2-208	ENST00000579466	DGCR14	Q96DF8	476 aa	Known RBP	6.99	□□□□□ -1.29
MSI2-208	ENST00000579466	OR10C1	Q96KK4	312 aa		6.99	□□□□□ -1.29
MSI2-208	ENST00000579466	GINS3	Q9BRX5	216 aa		6.99	□□□□□ -1.29
MSI2-208	ENST00000579466	NXF2	Q9GZY0	626 aa	Known RBP	6.99	□□□□□ -1.29
MSI2-208	ENST00000579466	FXYD6	Q9H0Q3	95 aa		6.99	□□□□□ -1.29
MSI2-208	ENST00000579466	PRND	Q9UKY0	176 aa		6.99	□□□□□ -1.29
MSI2-208	ENST00000579466	SSR3	Q9UNL2	185 aa		6.99	□□□□□ -1.29
MSI2-208	ENST00000579466	TRAV10	A0A0B4J240	114 aa		6.98	□□□□□ -1.29
MSI2-208	ENST00000579466	LOC100506127	A0A0U1RQW1	187 aa		6.98	□□□□□ -1.29
MSI2-208	ENST00000579466	PRSS29P	A6NIE9	313 aa		6.98	□□□□□ -1.29
MSI2-208	ENST00000579466	FGF2	P09038	288 aa		6.98	□□□□□ -1.29
MSI2-208	ENST00000579466	ZNF688	P0C7X2	276 aa		6.98	□□□□□ -1.29
MSI2-208	ENST00000579466	FGF9	P31371	208 aa	Predicted RBP	6.98	□□□□□ -1.29
MSI2-208	ENST00000579466	TOMM20L	Q6UXN7	152 aa		6.98	□□□□□ -1.29
MSI2-208	ENST00000579466	LINC00336	Q6ZUF6	198 aa		6.98	□□□□□ -1.29
MSI2-208	ENST00000579466	BORCS5	Q969J3	196 aa		6.98	□□□□□ -1.29
MSI2-208	ENST00000579466	ATP6V0B	Q99437	205 aa		6.98	□□□□□ -1.29
MSI2-208	ENST00000579466	SCRT1	Q9BWW7	348 aa		6.98	□□□□□ -1.29
MSI2-208	ENST00000579466	DIABLO	Q9NR28	239 aa		6.98	□□□□□ -1.29
MSI2-208	ENST00000579466	CELA1	Q9UNI1	258 aa		6.98	□□□□□ -1.29
MSI2-208	ENST00000579466	PUS1	Q9Y606	427 aa	Known RBP eCLIP	6.98	□□□□□ -1.29
MSI2-208	ENST00000579466	PKD1	P98161	4303 aa		6.97	□□□□□ -1.29
MSI2-208	ENST00000579466	ELOA3C	A0A087WX78	387 aa	Predicted RBP	6.97	□□□□□ -1.29
MSI2-208	ENST00000579466		A0A1B0GVY2	172 aa		6.97	□□□□□ -1.29
MSI2-208	ENST00000579466	CBX5	P45973	191 aa		6.97	□□□□□ -1.29
MSI2-208	ENST00000579466	HSPA13	P48723	471 aa		6.97	□□□□□ -1.29
MSI2-208	ENST00000579466	ACTL10	Q5JWF8	245 aa		6.97	□□□□□ -1.29
MSI2-208	ENST00000579466	UBE2U	Q5VVX9	321 aa		6.97	□□□□□ -1.29
MSI2-208	ENST00000579466	CMTM1	Q8IZ96	169 aa		6.97	□□□□□ -1.29
MSI2-208	ENST00000579466	OR5H2	Q8NGV7	314 aa		6.97	□□□□□ -1.29
MSI2-208	ENST00000579466	OR4A16	Q8NH70	328 aa		6.97	□□□□□ -1.29
MSI2-208	ENST00000579466	MOB3A	Q96BX8	217 aa		6.97	□□□□□ -1.29
MSI2-208	ENST00000579466	TSC22D3	Q99576	134 aa		6.97	□□□□□ -1.29
MSI2-208	ENST00000579466	HRH4	Q9H3N8	390 aa		6.97	□□□□□ -1.29
MSI2-208	ENST00000579466	TMEM14B	Q9NUH8	114 aa		6.97	□□□□□ -1.29
MSI2-208	ENST00000579466		X6R8D5	127 aa		6.97	□□□□□ -1.29
MSI2-208	ENST00000579466		A0A1B0GU03	582 aa		6.96	□□□□□ -1.3
MSI2-208	ENST00000579466	GPR31	O00270	319 aa		6.96	□□□□□ -1.3
MSI2-208	ENST00000579466	GIG44	P09565	113 aa	Predicted RBP	6.96	□□□□□ -1.3
MSI2-208	ENST00000579466	MED14OS	P0DP75	135 aa		6.96	□□□□□ -1.3
MSI2-208	ENST00000579466	MIF	P14174	115 aa		6.96	□□□□□ -1.3
MSI2-208	ENST00000579466	GABARAPL2	P60520	117 aa		6.96	□□□□□ -1.3
MSI2-208	ENST00000579466	IZUMO4	Q1ZYL8	232 aa		6.96	□□□□□ -1.3
MSI2-208	ENST00000579466	PVRIG	Q6DKI7	326 aa		6.96	□□□□□ -1.3
MSI2-208	ENST00000579466	H2BFWT	Q7Z2G1	175 aa		6.96	□□□□□ -1.3
MSI2-208	ENST00000579466	TRPT1	Q86TN4	253 aa	Known RBP	6.96	□□□□□ -1.3
MSI2-208	ENST00000579466	SPART	Q8N0X7	666 aa		6.96	□□□□□ -1.3
MSI2-208	ENST00000579466	MRGPRF	Q96AM1	343 aa		6.96	□□□□□ -1.3
MSI2-208	ENST00000579466	TXN2	Q99757	166 aa		6.96	□□□□□ -1.3
MSI2-208	ENST00000579466	VSIR	Q9H7M9	311 aa		6.96	□□□□□ -1.3
MSI2-208	ENST00000579466	ZFAND3	Q9H8U3	227 aa		6.96	□□□□□ -1.3
MSI2-208	ENST00000579466	FKBP11	Q9NYL4	201 aa		6.96	□□□□□ -1.3
MSI2-208	ENST00000579466	IGLV2-18	A0A075B6J9	118 aa		6.95	□□□□□ -1.3
MSI2-208	ENST00000579466	DEFB131B	A0A096LNP1	70 aa		6.95	□□□□□ -1.3
MSI2-208	ENST00000579466	RTL8C	O15255	209 aa		6.95	□□□□□ -1.3
MSI2-208	ENST00000579466	HLA-DMA	P28067	261 aa		6.95	□□□□□ -1.3
MSI2-208	ENST00000579466	NPBWR1	P48145	328 aa		6.95	□□□□□ -1.3
MSI2-208	ENST00000579466	PPP5C	P53041	499 aa		6.95	□□□□□ -1.3
MSI2-208	ENST00000579466	PRCD	Q00LT1	54 aa		6.95	□□□□□ -1.3
MSI2-208	ENST00000579466	ZNF600	Q6ZNG1	722 aa		6.95	□□□□□ -1.3
MSI2-208	ENST00000579466	TBC1D26	Q86UD7	250 aa		6.95	□□□□□ -1.3
MSI2-208	ENST00000579466	ZNF114	Q8NC26	417 aa		6.95	□□□□□ -1.3
MSI2-208	ENST00000579466	DUSP18	Q8NEJ0	188 aa		6.95	□□□□□ -1.3
MSI2-208	ENST00000579466	VCX3B	Q9H321	246 aa		6.95	□□□□□ -1.3
MSI2-208	ENST00000579466	TMEM231	Q9H6L2	316 aa		6.95	□□□□□ -1.3
MSI2-208	ENST00000579466	TBC1D24	Q9ULP9	559 aa		6.95	□□□□□ -1.3
MSI2-208	ENST00000579466		A0A0A6YYH2	397 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466		A6NJ64	397 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	ZNF705E	A8MWA4	302 aa	Predicted RBP	6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	IGKV1-39	P01597	117 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	AMBP	P02760	352 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	IGKV1D-39	P04432	117 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	CD5	P06127	495 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	SPP1	P10451	314 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	NPPC	P23582	126 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	HRH1	P35367	487 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	TGFBR1	P36897	503 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	P2RY1	P47900	373 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	EMP1	P54849	157 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	TAS2R46	P59540	309 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	TAS2R20	P59543	309 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	ERH	P84090	104 aa	Known RBP	6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	C12orf74	Q32Q52	190 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	PSMG4	Q5JS54	123 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	TMEM69	Q5SWH9	247 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	MORN3	Q6PF18	240 aa	Predicted RBP	6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	DHRS11	Q6UWP2	260 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	ZNF575	Q86XF7	245 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	UBE2DNL	Q8IWF7	75 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	POM121L12	Q8N7R1	296 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	SLC35G3	Q8N808	338 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	OR6F1	Q8NGZ6	308 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	SEC22A	Q96IW7	307 aa		6.94	□□□□□ -1.3
MSI2-208	ENST00000579466	METTL26	Q96S19	204 aa		6.94	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms