RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 SDC2P34741 201 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 RBMY1FQ15415 496 aaKnown RBP6.21□□□□□ -1.42
CASC3-206ENST00000579238 TOMM20LQ6UXN7 152 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 CMTM1Q8IZ96 169 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 ZNF114Q8NC26 417 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 DUSP18Q8NEJ0 188 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 ST8SIA2Q92186 375 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 RNF126Q9BV68 326 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 IFT46Q9NQC8 304 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 EHFQ9NZC4 300 aa6.21□□□□□ -1.42
CASC3-206ENST00000579238 MEIS3P1A6NDR6 274 aa6.2□□□□□ -1.42
CASC3-206ENST00000579238 ZNF705EA8MWA4 302 aaPredicted RBP6.2□□□□□ -1.42
CASC3-206ENST00000579238 IGHV3-48P01763 117 aa6.2□□□□□ -1.42
CASC3-206ENST00000579238 APOHP02749 345 aaPredicted RBP6.2□□□□□ -1.42
CASC3-206ENST00000579238 CLEC2LP0C7M8 214 aa6.2□□□□□ -1.42
CASC3-206ENST00000579238 SPP1P10451 314 aa6.2□□□□□ -1.42
CASC3-206ENST00000579238 HSPA13P48723 471 aa6.2□□□□□ -1.42
CASC3-206ENST00000579238 GABARAPL2P60520 117 aa6.2□□□□□ -1.42
CASC3-206ENST00000579238 RPL11P62913 178 aaKnown RBP6.2□□□□□ -1.42
CASC3-206ENST00000579238 MXD1Q05195 221 aa6.2□□□□□ -1.42
CASC3-206ENST00000579238 IDNKQ5T6J7 187 aa6.2□□□□□ -1.42
CASC3-206ENST00000579238 PVRIGQ6DKI7 326 aa6.2□□□□□ -1.42
CASC3-206ENST00000579238 MORN3Q6PF18 240 aaPredicted RBP6.2□□□□□ -1.42
CASC3-206ENST00000579238 Q6ZTC4 211 aa6.2□□□□□ -1.42
CASC3-206ENST00000579238 TRPT1Q86TN4 253 aaKnown RBP6.2□□□□□ -1.42
CASC3-206ENST00000579238 CENPSQ8N2Z9 138 aa6.2□□□□□ -1.42
CASC3-206ENST00000579238 LILRB2Q8N423 598 aa6.2□□□□□ -1.42
CASC3-206ENST00000579238 FAM24BQ8N5W8 94 aa6.2□□□□□ -1.42
CASC3-206ENST00000579238 FCGR1BQ92637 280 aa6.2□□□□□ -1.42
CASC3-206ENST00000579238 PINX1Q96BK5 328 aaKnown RBP6.2□□□□□ -1.42
CASC3-206ENST00000579238 ZNF2Q9BSG1 426 aaPredicted RBP6.2□□□□□ -1.42
CASC3-206ENST00000579238 VCX3BQ9H321 246 aa6.2□□□□□ -1.42
CASC3-206ENST00000579238 TMEM231Q9H6L2 316 aa6.2□□□□□ -1.42
CASC3-206ENST00000579238 FAM212BQ9NTI7 297 aaPredicted RBP6.2□□□□□ -1.42
CASC3-206ENST00000579238 DYNC1H1Q14204 4646 aaKnown RBP6.2□□□□□ -1.42
CASC3-206ENST00000579238 ELOA3CA0A087WX78 387 aaPredicted RBP6.19□□□□□ -1.42
CASC3-206ENST00000579238 IGHV3-66A0A0C4DH42 116 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 ANKRD65E5RJM6 399 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 GPR31O00270 319 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 PMP2P02689 132 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 NPBWR1P48145 328 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 RFX2P48378 723 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 TAS2R46P59540 309 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 ERHP84090 104 aaKnown RBP6.19□□□□□ -1.42
CASC3-206ENST00000579238 PRCDQ00LT1 54 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 IZUMO2Q6UXV1 221 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 ZNF600Q6ZNG1 722 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 H2BFWTQ7Z2G1 175 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 SPARTQ8N0X7 666 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 OR6F1Q8NGZ6 308 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 OR4A16Q8NH70 328 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 GRAMD2BQ96HH9 432 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 FXYD6Q9H0Q3 95 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 ZFAND3Q9H8U3 227 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 RABAC1Q9UI14 185 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 ANAPC10Q9UM13 185 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 PUS1Q9Y606 427 aaKnown RBP eCLIP6.19□□□□□ -1.42
CASC3-206ENST00000579238 X6R8D5 127 aa6.19□□□□□ -1.42
CASC3-206ENST00000579238 RYR1P21817 5038 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 A0A1W2PS18 150 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 PRSS29PA6NIE9 313 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 K7EQG2 157 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 TMEM127O75204 238 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 AMBPP02760 352 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 P0DMU3 169 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 FAM231AP0DMU4 169 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 FAM231CP0DMU5 169 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 NAT1P18440 290 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 C4BPBP20851 252 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 NPPCP23582 126 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 S100GP29377 79 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 HSPE1P61604 102 aaKnown RBP6.18□□□□□ -1.42
CASC3-206ENST00000579238 PHLDA2Q53GA4 152 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 POM121L12Q8N7R1 296 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 OR5H2Q8NGV7 314 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 SEC22AQ96IW7 307 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 RNF167Q9H6Y7 350 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 DNAH11Q96DT5 4516 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 DNAH17Q9UFH2 4485 aa6.18□□□□□ -1.42
CASC3-206ENST00000579238 MUC4Q99102 2169 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 DEFB131BA0A096LNP1 70 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 A0A1B0GU03 582 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 KNCNA6PVL3 124 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 RTL8CO15255 209 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 TMEM50AO95807 157 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 IGKV1-39P01597 117 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 IGKV1D-39P04432 117 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 ZNF688P0C7X2 276 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 C12orf74Q32Q52 190 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 KCTD21Q4G0X4 260 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 LPCAT3Q6P1A2 487 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 TBC1D26Q86UD7 250 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 CSNK1G2-AS1Q8NCQ2 148 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 STXBP6Q8NFX7 210 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 S100A16Q96FQ6 103 aaKnown RBP6.17□□□□□ -1.42
CASC3-206ENST00000579238 METTL26Q96S19 204 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 TBC1D24Q9ULP9 559 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 RAB26Q9ULW5 256 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 CELA1Q9UNI1 258 aa6.17□□□□□ -1.42
CASC3-206ENST00000579238 AGRNO00468 2067 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms