RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 PEF1Q9UBV8 284 aaKnown RBP12.04□□□□□ -0.48
SLC6A4-205ENST00000579221 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.03□□□□□ -0.48
SLC6A4-205ENST00000579221 LINC01619G3V211 115 aa12.03□□□□□ -0.48
SLC6A4-205ENST00000579221 WRBO00258 174 aa12.03□□□□□ -0.48
SLC6A4-205ENST00000579221 IFNA10P01566 189 aa12.03□□□□□ -0.48
SLC6A4-205ENST00000579221 ATP5IP56385 69 aaPredicted RBP12.03□□□□□ -0.48
SLC6A4-205ENST00000579221 RPP30P78346 268 aaKnown RBP12.03□□□□□ -0.48
SLC6A4-205ENST00000579221 ZNF616Q08AN1 781 aa12.03□□□□□ -0.48
SLC6A4-205ENST00000579221 OXA1LQ15070 435 aa12.03□□□□□ -0.48
SLC6A4-205ENST00000579221 DEFB136Q30KP8 78 aa12.03□□□□□ -0.48
SLC6A4-205ENST00000579221 BSXQ3C1V8 233 aa12.03□□□□□ -0.48
SLC6A4-205ENST00000579221 C2orf83Q53S99 150 aa12.03□□□□□ -0.48
SLC6A4-205ENST00000579221 PRR31Q5SQ13 230 aa12.03□□□□□ -0.48
SLC6A4-205ENST00000579221 SLC24A4Q8NFF2 622 aa12.03□□□□□ -0.48
SLC6A4-205ENST00000579221 DUX3Q96PT4 197 aa12.03□□□□□ -0.48
SLC6A4-205ENST00000579221 MAGT1Q9H0U3 335 aa12.03□□□□□ -0.48
SLC6A4-205ENST00000579221 TENM1Q9UKZ4 2725 aa12.02□□□□□ -0.49
SLC6A4-205ENST00000579221 C7orf66A4D0T2 115 aa12.02□□□□□ -0.49
SLC6A4-205ENST00000579221 GOSR2O14653 212 aa12.02□□□□□ -0.49
SLC6A4-205ENST00000579221 SCGB1D2O95969 90 aa12.02□□□□□ -0.49
SLC6A4-205ENST00000579221 OR8U8P0C7N1 319 aa12.02□□□□□ -0.49
SLC6A4-205ENST00000579221 IAPPP10997 89 aa12.02□□□□□ -0.49
SLC6A4-205ENST00000579221 NPY1RP25929 384 aa12.02□□□□□ -0.49
SLC6A4-205ENST00000579221 PVRIGQ6DKI7 326 aa12.02□□□□□ -0.49
SLC6A4-205ENST00000579221 ETV3LQ6ZN32 361 aa12.02□□□□□ -0.49
SLC6A4-205ENST00000579221 ALG5Q9Y673 324 aa12.02□□□□□ -0.49
SLC6A4-205ENST00000579221 MFSD2BA6NFX1 497 aa12.01□□□□□ -0.49
SLC6A4-205ENST00000579221 MT-CO2P00403 227 aa12.01□□□□□ -0.49
SLC6A4-205ENST00000579221 IGHV3-23P01764 117 aa12.01□□□□□ -0.49
SLC6A4-205ENST00000579221 POLR2GP62487 172 aaKnown RBP eCLIP12.01□□□□□ -0.49
SLC6A4-205ENST00000579221 RNASEH2CQ8TDP1 164 aaKnown RBP12.01□□□□□ -0.49
SLC6A4-205ENST00000579221 SCARB1Q8WTV0 552 aa12.01□□□□□ -0.49
SLC6A4-205ENST00000579221 PINX1Q96BK5 328 aaKnown RBP12.01□□□□□ -0.49
SLC6A4-205ENST00000579221 S4R3C0 116 aa12.01□□□□□ -0.49
SLC6A4-205ENST00000579221 STAB1Q9NY15 2570 aa12□□□□□ -0.49
SLC6A4-205ENST00000579221 IGHV4OR15-8A0A075B7B6 117 aa12□□□□□ -0.49
SLC6A4-205ENST00000579221 A0A087WW49 117 aa12□□□□□ -0.49
SLC6A4-205ENST00000579221 IGHV3-21A0A0B4J1V1 117 aa12□□□□□ -0.49
SLC6A4-205ENST00000579221 I3L2K1 104 aa12□□□□□ -0.49
SLC6A4-205ENST00000579221 K7EIM0 57 aa12□□□□□ -0.49
SLC6A4-205ENST00000579221 MBPP02686 304 aaPredicted RBP12□□□□□ -0.49
SLC6A4-205ENST00000579221 CLEC3BP05452 202 aa12□□□□□ -0.49
SLC6A4-205ENST00000579221 ZP3P21754 424 aa12□□□□□ -0.49
SLC6A4-205ENST00000579221 MFAP4P55083 255 aa12□□□□□ -0.49
SLC6A4-205ENST00000579221 RAB11AP62491 216 aa12□□□□□ -0.49
SLC6A4-205ENST00000579221 CYCSP99999 105 aaKnown RBP12□□□□□ -0.49
SLC6A4-205ENST00000579221 FHL3Q13643 280 aa12□□□□□ -0.49
SLC6A4-205ENST00000579221 TREML4Q6UXN2 200 aa12□□□□□ -0.49
SLC6A4-205ENST00000579221 CLEC19AQ6UXS0 136 aa12□□□□□ -0.49
SLC6A4-205ENST00000579221 ZNF502Q8TBZ5 544 aa12□□□□□ -0.49
SLC6A4-205ENST00000579221 ATP6V0BQ99437 205 aa12□□□□□ -0.49
SLC6A4-205ENST00000579221 TXN2Q99757 166 aa12□□□□□ -0.49
SLC6A4-205ENST00000579221 GAR1Q9NY12 217 aaKnown RBP12□□□□□ -0.49
SLC6A4-205ENST00000579221 C21orf62Q9NYP8 219 aa12□□□□□ -0.49
SLC6A4-205ENST00000579221 RPS10-NUDT3A0A1W2PQS6 291 aa11.99□□□□□ -0.49
SLC6A4-205ENST00000579221 GGCTO75223 188 aaKnown RBP11.99□□□□□ -0.49
SLC6A4-205ENST00000579221 SIX6O95475 246 aa11.99□□□□□ -0.49
SLC6A4-205ENST00000579221 IFNA4P05014 189 aa11.99□□□□□ -0.49
SLC6A4-205ENST00000579221 CD33P20138 364 aa11.99□□□□□ -0.49
SLC6A4-205ENST00000579221 OPRK1P41145 380 aa11.99□□□□□ -0.49
SLC6A4-205ENST00000579221 C11orf87Q6NUJ2 197 aa11.99□□□□□ -0.49
SLC6A4-205ENST00000579221 LINC00482Q8N8I6 264 aa11.99□□□□□ -0.49
SLC6A4-205ENST00000579221 WFDC9Q8NEX5 89 aa11.99□□□□□ -0.49
SLC6A4-205ENST00000579221 SMIM8Q96KF7 97 aa11.99□□□□□ -0.49
SLC6A4-205ENST00000579221 RAB40CQ96S21 281 aa11.99□□□□□ -0.49
SLC6A4-205ENST00000579221 PSENENQ9NZ42 101 aa11.99□□□□□ -0.49
SLC6A4-205ENST00000579221 MGAT4CQ9UBM8 478 aa11.99□□□□□ -0.49
SLC6A4-205ENST00000579221 L7N2F9 121 aa11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 SSSCA1O60232 199 aa11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 TRBV12-3P01733 135 aa11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 ARL3P36405 182 aa11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 TAS2R30P59541 319 aa11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 VAMP2P63027 116 aa11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 IL15RAQ13261 267 aa11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 RPEL1Q2QD12 228 aa11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 Q56UQ5 140 aa11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 SPANXN5Q5MJ07 72 aa11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 ETFRF1Q6IPR1 90 aa11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 ACSM6Q6P461 480 aa11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 CCDC140Q96MF4 163 aa11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 NMES1Q9C002 83 aa11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 MED28Q9H204 178 aa11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 PAIP2BQ9ULR5 123 aaKnown RBP11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 RCL1Q9Y2P8 373 aaKnown RBP11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 STRAPQ9Y3F4 350 aaKnown RBP11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 LSM5Q9Y4Y9 91 aaKnown RBP11.98□□□□□ -0.49
SLC6A4-205ENST00000579221 K7EPK0 472 aa11.97□□□□□ -0.49
SLC6A4-205ENST00000579221 PVALBP20472 110 aaPredicted RBP11.97□□□□□ -0.49
SLC6A4-205ENST00000579221 HOXD3P31249 432 aaPredicted RBP11.97□□□□□ -0.49
SLC6A4-205ENST00000579221 NPBWR1P48145 328 aa11.97□□□□□ -0.49
SLC6A4-205ENST00000579221 SLURP1P55000 103 aa11.97□□□□□ -0.49
SLC6A4-205ENST00000579221 MLANAQ16655 118 aa11.97□□□□□ -0.49
SLC6A4-205ENST00000579221 UBAC2Q8NBM4 344 aa11.97□□□□□ -0.49
SLC6A4-205ENST00000579221 TMEM170AQ8WVE7 144 aa11.97□□□□□ -0.49
SLC6A4-205ENST00000579221 DCUN1D4Q92564 292 aa11.97□□□□□ -0.49
SLC6A4-205ENST00000579221 BSCL2Q96G97 398 aaPredicted RBP11.97□□□□□ -0.49
SLC6A4-205ENST00000579221 OR2T8A6NH00 312 aa11.96□□□□□ -0.49
SLC6A4-205ENST00000579221 C15orf62A8K5M9 175 aa11.96□□□□□ -0.49
SLC6A4-205ENST00000579221 PPP5D1E7EU14 171 aa11.96□□□□□ -0.49
SLC6A4-205ENST00000579221 BMPR1BO00238 502 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms