RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 C3orf56Q8N813 242 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 NECAP1Q8NC96 275 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 OR1L6Q8NGR2 347 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 TMEM170AQ8WVE7 144 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 SMIM8Q96KF7 97 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 OR5B12Q96R08 314 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 OR4C12Q96R67 309 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 CITED2Q99967 270 aaPredicted RBP9.45□□□□□ -0.9
IFT20-207ENST00000578547 OR5AC2Q9NZP5 309 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 STRAPQ9Y3F4 350 aaKnown RBP9.45□□□□□ -0.9
IFT20-207ENST00000578547 U3KQ87 197 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 FAM223BA6NKX1 122 aa9.44□□□□□ -0.9
IFT20-207ENST00000578547 C15orf62A8K5M9 175 aa9.44□□□□□ -0.9
IFT20-207ENST00000578547 NUDT19A8MXV4 375 aa9.44□□□□□ -0.9
IFT20-207ENST00000578547 MPC2O95563 127 aa9.44□□□□□ -0.9
IFT20-207ENST00000578547 LY86O95711 162 aa9.44□□□□□ -0.9
IFT20-207ENST00000578547 IGHV3-11P01762 117 aa9.44□□□□□ -0.9
IFT20-207ENST00000578547 IGHV3-23P01764 117 aa9.44□□□□□ -0.9
IFT20-207ENST00000578547 IFNA4P05014 189 aa9.44□□□□□ -0.9
IFT20-207ENST00000578547 PAX9P55771 341 aa9.44□□□□□ -0.9
IFT20-207ENST00000578547 ATP5G2Q06055 141 aa9.44□□□□□ -0.9
IFT20-207ENST00000578547 C15orf32Q32M92 178 aa9.44□□□□□ -0.9
IFT20-207ENST00000578547 FAM223AQ8IWN6 122 aa9.44□□□□□ -0.9
IFT20-207ENST00000578547 OR2T35Q8NGX2 323 aa9.44□□□□□ -0.9
IFT20-207ENST00000578547 ZNF747Q9BV97 191 aa9.44□□□□□ -0.9
IFT20-207ENST00000578547 THYN1Q9P016 225 aa9.44□□□□□ -0.9
IFT20-207ENST00000578547 MBD2Q9UBB5 411 aa9.44□□□□□ -0.9
IFT20-207ENST00000578547 TRAV14DV4A0A0A6YYC5 116 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 TRBV9A0A0B4J1U6 114 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 MFSD2BA6NFX1 497 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 H0YIZ8 118 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 SMLR1H3BR10 107 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 TSC22D2O75157 780 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 CCNKO75909 580 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 IGHV3-48P01763 117 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 METTL15P1P0C7V9 234 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 OPRK1P41145 380 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 TAS2R30P59541 319 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 RAB11AP62491 216 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 EXOSC2Q13868 293 aaKnown RBP9.43□□□□□ -0.9
IFT20-207ENST00000578547 NSUN5P1Q3KNT7 163 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 OR8G2PQ6IF36 304 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 PRSS54Q6PEW0 395 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 NOXA1Q86UR1 476 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 RNF152Q8N8N0 203 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 KLHL30-AS1Q8NEE0 82 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 THAP6Q8TBB0 222 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 ASB13Q8WXK3 278 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 DCUN1D4Q92564 292 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 GNB4Q9HAV0 340 aa9.43□□□□□ -0.9
IFT20-207ENST00000578547 RANGRFQ9HD47 186 aaPredicted RBP9.43□□□□□ -0.9
IFT20-207ENST00000578547 A0A0G2JLM5 398 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 FAM24AA6NFZ4 105 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 E5RGE8 158 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 K7EIM0 57 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 CORTO00230 105 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 BRI3O95415 125 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 MT-CO2P00403 227 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 FGL1Q08830 312 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 Q5BKY6 102 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 ETV3LQ6ZN32 361 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 C18orf65Q6ZTR6 163 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 AKAP14Q86UN6 197 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 ZNF491Q8N8L2 437 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 UBAC2Q8NBM4 344 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 MYOZ3Q8TDC0 251 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 EEF1AKMT3Q96AZ1 226 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 USMG5Q96IX5 58 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 UBE2E2Q96LR5 201 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 CITED1Q99966 193 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 C11orf1Q9H5F2 150 aa9.42□□□□□ -0.9
IFT20-207ENST00000578547 TSSC4Q9Y5U2 329 aaPredicted RBP9.42□□□□□ -0.9
IFT20-207ENST00000578547 FXYD6-FXYD2A0A087WZ82 144 aa9.41□□□□□ -0.9
IFT20-207ENST00000578547 IGSF23A1L1A6 192 aa9.41□□□□□ -0.9
IFT20-207ENST00000578547 ANKRD34BA5PLL1 514 aa9.41□□□□□ -0.9
IFT20-207ENST00000578547 I3L2K1 104 aa9.41□□□□□ -0.9
IFT20-207ENST00000578547 CST7O76096 145 aa9.41□□□□□ -0.9
IFT20-207ENST00000578547 P2RY1P47900 373 aa9.41□□□□□ -0.9
IFT20-207ENST00000578547 ATP5IP56385 69 aaPredicted RBP9.41□□□□□ -0.9
IFT20-207ENST00000578547 KIAA0141Q14154 515 aaPredicted RBP9.41□□□□□ -0.9
IFT20-207ENST00000578547 DEFB136Q30KP8 78 aa9.41□□□□□ -0.9
IFT20-207ENST00000578547 PVRIGQ6DKI7 326 aa9.41□□□□□ -0.9
IFT20-207ENST00000578547 ACSM6Q6P461 480 aa9.41□□□□□ -0.9
IFT20-207ENST00000578547 TMEM14EPQ6UXP3 125 aa9.41□□□□□ -0.9
IFT20-207ENST00000578547 STX12Q86Y82 276 aa9.41□□□□□ -0.9
IFT20-207ENST00000578547 RNASEH2CQ8TDP1 164 aaKnown RBP9.41□□□□□ -0.9
IFT20-207ENST00000578547 SCARB1Q8WTV0 552 aa9.41□□□□□ -0.9
IFT20-207ENST00000578547 CXorf58Q96LI9 332 aa9.41□□□□□ -0.9
IFT20-207ENST00000578547 RNF126Q9BV68 326 aa9.41□□□□□ -0.9
IFT20-207ENST00000578547 FNDC4Q9H6D8 234 aaPredicted RBP9.41□□□□□ -0.9
IFT20-207ENST00000578547 ZC4H2Q9NQZ6 224 aa9.41□□□□□ -0.9
IFT20-207ENST00000578547 LYRM2Q9NU23 88 aaPredicted RBP9.41□□□□□ -0.9
IFT20-207ENST00000578547 RPS10-NUDT3A0A1W2PQS6 291 aa9.4□□□□□ -0.9
IFT20-207ENST00000578547 LGALS1P09382 135 aaKnown RBP9.4□□□□□ -0.9
IFT20-207ENST00000578547 CDX1P47902 265 aaPredicted RBP9.4□□□□□ -0.9
IFT20-207ENST00000578547 MLANAQ16655 118 aa9.4□□□□□ -0.9
IFT20-207ENST00000578547 KLK9Q2XQG4 91 aa9.4□□□□□ -0.9
IFT20-207ENST00000578547 Q56UQ5 140 aa9.4□□□□□ -0.9
IFT20-207ENST00000578547 SHISA2Q6UWI4 295 aa9.4□□□□□ -0.9
IFT20-207ENST00000578547 C8orf86Q6ZUL3 223 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms