RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 RNF223E7ERA6 249 aa13.53□□□□□ -0.24
SREBF1-218ENST00000578469 E7EUB6 86 aa13.53□□□□□ -0.24
SREBF1-218ENST00000578469 TSPAN9O75954 239 aa13.53□□□□□ -0.24
SREBF1-218ENST00000578469 CNIH1O95406 144 aa13.53□□□□□ -0.24
SREBF1-218ENST00000578469 IGHV1-69P01742 117 aa13.53□□□□□ -0.24
SREBF1-218ENST00000578469 TMEM11P17152 192 aa13.53□□□□□ -0.24
SREBF1-218ENST00000578469 GPX4P36969 197 aaPredicted RBP13.53□□□□□ -0.24
SREBF1-218ENST00000578469 AKR1C1Q04828 323 aa13.53□□□□□ -0.24
SREBF1-218ENST00000578469 DYNAPQ8N1N2 210 aa13.53□□□□□ -0.24
SREBF1-218ENST00000578469 RNASEH2CQ8TDP1 164 aaKnown RBP13.53□□□□□ -0.24
SREBF1-218ENST00000578469 CACNG8Q8WXS5 425 aa13.53□□□□□ -0.24
SREBF1-218ENST00000578469 C1RLQ9NZP8 487 aa13.53□□□□□ -0.24
SREBF1-218ENST00000578469 ABCA1O95477 2261 aa13.52□□□□□ -0.24
SREBF1-218ENST00000578469 ZP3P21754 424 aa13.52□□□□□ -0.25
SREBF1-218ENST00000578469 ELLP55199 621 aaPredicted RBP13.52□□□□□ -0.25
SREBF1-218ENST00000578469 WT1-ASQ06250 92 aa13.52□□□□□ -0.25
SREBF1-218ENST00000578469 KRTAP1-1Q07627 177 aa13.52□□□□□ -0.25
SREBF1-218ENST00000578469 FFAR4Q5NUL3 377 aa13.52□□□□□ -0.25
SREBF1-218ENST00000578469 TEPPQ6URK8 271 aa13.52□□□□□ -0.25
SREBF1-218ENST00000578469 TREML4Q6UXN2 200 aa13.52□□□□□ -0.25
SREBF1-218ENST00000578469 LINC01356Q8N9X3 169 aa13.52□□□□□ -0.25
SREBF1-218ENST00000578469 PBDC1Q9BVG4 233 aa13.52□□□□□ -0.25
SREBF1-218ENST00000578469 C7orf69Q9H7B7 122 aa13.52□□□□□ -0.25
SREBF1-218ENST00000578469 TREM1Q9NP99 234 aa13.52□□□□□ -0.25
SREBF1-218ENST00000578469 RPRMQ9NS64 109 aa13.52□□□□□ -0.25
SREBF1-218ENST00000578469 IGLC7A0M8Q6 106 aa13.51□□□□□ -0.25
SREBF1-218ENST00000578469 AGPAT2O15120 278 aa13.51□□□□□ -0.25
SREBF1-218ENST00000578469 CD24P25063 80 aa13.51□□□□□ -0.25
SREBF1-218ENST00000578469 CD69Q07108 199 aa13.51□□□□□ -0.25
SREBF1-218ENST00000578469 C5orf64Q2M2E5 130 aa13.51□□□□□ -0.25
SREBF1-218ENST00000578469 ACOT6Q3I5F7 207 aaPredicted RBP13.51□□□□□ -0.25
SREBF1-218ENST00000578469 ARSJQ5FYB0 599 aaPredicted RBP13.51□□□□□ -0.25
SREBF1-218ENST00000578469 Q8N6K4 173 aa13.51□□□□□ -0.25
SREBF1-218ENST00000578469 ZNF114Q8NC26 417 aa13.51□□□□□ -0.25
SREBF1-218ENST00000578469 MAPK1IP1LQ8NDC0 245 aa13.51□□□□□ -0.25
SREBF1-218ENST00000578469 SFT2D1Q8WV19 159 aa13.51□□□□□ -0.25
SREBF1-218ENST00000578469 C17orf50Q8WW18 174 aa13.51□□□□□ -0.25
SREBF1-218ENST00000578469 SRSF12Q8WXF0 261 aaKnown RBP13.51□□□□□ -0.25
SREBF1-218ENST00000578469 NARS2Q96I59 477 aaKnown RBP13.51□□□□□ -0.25
SREBF1-218ENST00000578469 SLC35E1Q96K37 410 aa13.51□□□□□ -0.25
SREBF1-218ENST00000578469 P2RX4Q99571 388 aa13.51□□□□□ -0.25
SREBF1-218ENST00000578469 A0A1B0GW64 132 aa13.5□□□□□ -0.25
SREBF1-218ENST00000578469 NCBP2LA6PVI3 153 aaKnown RBP13.5□□□□□ -0.25
SREBF1-218ENST00000578469 CORTO00230 105 aa13.5□□□□□ -0.25
SREBF1-218ENST00000578469 CYB5BO43169 146 aa13.5□□□□□ -0.25
SREBF1-218ENST00000578469 CD5LO43866 347 aa13.5□□□□□ -0.25
SREBF1-218ENST00000578469 PAX6P26367 422 aa13.5□□□□□ -0.25
SREBF1-218ENST00000578469 OPRK1P41145 380 aa13.5□□□□□ -0.25
SREBF1-218ENST00000578469 LOXL1Q08397 574 aaPredicted RBP13.5□□□□□ -0.25
SREBF1-218ENST00000578469 PEA15Q15121 130 aa13.5□□□□□ -0.25
SREBF1-218ENST00000578469 ETFRF1Q6IPR1 90 aa13.5□□□□□ -0.25
SREBF1-218ENST00000578469 TMEM144Q7Z5S9 345 aa13.5□□□□□ -0.25
SREBF1-218ENST00000578469 BPIFCQ8NFQ6 507 aa13.5□□□□□ -0.25
SREBF1-218ENST00000578469 ABHD5Q8WTS1 349 aa13.5□□□□□ -0.25
SREBF1-218ENST00000578469 MBD3L1Q8WWY6 194 aa13.5□□□□□ -0.25
SREBF1-218ENST00000578469 ACTR3CQ9C0K3 210 aaPredicted RBP13.5□□□□□ -0.25
SREBF1-218ENST00000578469 YAE1D1Q9NRH1 226 aa13.5□□□□□ -0.25
SREBF1-218ENST00000578469 HIF1ANQ9NWT6 349 aa13.5□□□□□ -0.25
SREBF1-218ENST00000578469 TRAV1-1A0A0B4J248 108 aa13.49□□□□□ -0.25
SREBF1-218ENST00000578469 TRAV40A0A0B4J280 105 aa13.49□□□□□ -0.25
SREBF1-218ENST00000578469 FCN1O00602 326 aa13.49□□□□□ -0.25
SREBF1-218ENST00000578469 M6PRP20645 277 aa13.49□□□□□ -0.25
SREBF1-218ENST00000578469 ACSM6Q6P461 480 aa13.49□□□□□ -0.25
SREBF1-218ENST00000578469 SLC16A13Q7RTY0 426 aa13.49□□□□□ -0.25
SREBF1-218ENST00000578469 PIP4P2Q8N4L2 257 aa13.49□□□□□ -0.25
SREBF1-218ENST00000578469 OR10G4Q8NGN3 311 aa13.49□□□□□ -0.25
SREBF1-218ENST00000578469 OR10G9Q8NGN4 311 aa13.49□□□□□ -0.25
SREBF1-218ENST00000578469 OR10G7Q8NGN6 311 aa13.49□□□□□ -0.25
SREBF1-218ENST00000578469 AJUBAQ96IF1 538 aa13.49□□□□□ -0.25
SREBF1-218ENST00000578469 MGST2Q99735 147 aa13.49□□□□□ -0.25
SREBF1-218ENST00000578469 VSIRQ9H7M9 311 aa13.49□□□□□ -0.25
SREBF1-218ENST00000578469 SLC39A9Q9NUM3 307 aa13.49□□□□□ -0.25
SREBF1-218ENST00000578469 LSM4Q9Y4Z0 139 aaKnown RBP13.49□□□□□ -0.25
SREBF1-218ENST00000578469 A0A1B0GV50 99 aa13.48□□□□□ -0.25
SREBF1-218ENST00000578469 TEX22C9J3V5 150 aa13.48□□□□□ -0.25
SREBF1-218ENST00000578469 J3QLI3 93 aa13.48□□□□□ -0.25
SREBF1-218ENST00000578469 FXYD3Q14802 87 aa13.48□□□□□ -0.25
SREBF1-218ENST00000578469 GUK1Q16774 197 aa13.48□□□□□ -0.25
SREBF1-218ENST00000578469 SPSB3Q6PJ21 355 aa13.48□□□□□ -0.25
SREBF1-218ENST00000578469 OR1P1Q8NH06 330 aa13.48□□□□□ -0.25
SREBF1-218ENST00000578469 SSMEM1Q8WWF3 244 aa13.48□□□□□ -0.25
SREBF1-218ENST00000578469 RCC1LQ96I51 464 aaKnown RBP13.48□□□□□ -0.25
SREBF1-218ENST00000578469 LINC00052Q96N35 136 aa13.48□□□□□ -0.25
SREBF1-218ENST00000578469 GGTLC1Q9BX51 225 aa13.48□□□□□ -0.25
SREBF1-218ENST00000578469 PXMP4Q9Y6I8 212 aa13.48□□□□□ -0.25
SREBF1-218ENST00000578469 TNCP24821 2201 aa13.47□□□□□ -0.25
SREBF1-218ENST00000578469 IGHV3OR16-10A0A075B7F0 116 aa13.47□□□□□ -0.25
SREBF1-218ENST00000578469 A0A096LNT2 108 aa13.47□□□□□ -0.25
SREBF1-218ENST00000578469 CTXND1A0A1B0GTU2 59 aa13.47□□□□□ -0.25
SREBF1-218ENST00000578469 TMEM218A2RU14 115 aa13.47□□□□□ -0.25
SREBF1-218ENST00000578469 REG1AP05451 166 aa13.47□□□□□ -0.25
SREBF1-218ENST00000578469 AREGP15514 252 aa13.47□□□□□ -0.25
SREBF1-218ENST00000578469 GAMTQ14353 236 aa13.47□□□□□ -0.25
SREBF1-218ENST00000578469 RUSC1-AS1Q66K80 236 aa13.47□□□□□ -0.25
SREBF1-218ENST00000578469 PVRIGQ6DKI7 326 aa13.47□□□□□ -0.25
SREBF1-218ENST00000578469 ZNF562Q6V9R5 426 aa13.47□□□□□ -0.25
SREBF1-218ENST00000578469 OR1L6Q8NGR2 347 aa13.47□□□□□ -0.25
SREBF1-218ENST00000578469 C22orf15Q8WYQ4 148 aa13.47□□□□□ -0.25
SREBF1-218ENST00000578469 EIF5A2Q9GZV4 153 aaKnown RBP13.47□□□□□ -0.25
SREBF1-218ENST00000578469 FAM96BQ9Y3D0 163 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms