RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 K7EIM0 57 aa8.82□□□□□ -1
GGA3-204ENST00000578208 CORTO00230 105 aa8.82□□□□□ -1
GGA3-204ENST00000578208 NUPL2O15504 423 aaKnown RBP8.82□□□□□ -1
GGA3-204ENST00000578208 MT-CO2P00403 227 aa8.82□□□□□ -1
GGA3-204ENST00000578208 ELLP55199 621 aaPredicted RBP8.82□□□□□ -1
GGA3-204ENST00000578208 SPCS3P61009 180 aa8.82□□□□□ -1
GGA3-204ENST00000578208 RELQ04864 619 aaPredicted RBP8.82□□□□□ -1
GGA3-204ENST00000578208 TMEM187Q14656 261 aa8.82□□□□□ -1
GGA3-204ENST00000578208 CD300EQ496F6 205 aaPredicted RBP8.82□□□□□ -1
GGA3-204ENST00000578208 LGI3Q8N145 548 aa8.82□□□□□ -1
GGA3-204ENST00000578208 LHFPL5Q8TAF8 219 aa8.82□□□□□ -1
GGA3-204ENST00000578208 TMEM230Q96A57 120 aa8.82□□□□□ -1
GGA3-204ENST00000578208 SLC25A21Q9BQT8 299 aaPredicted RBP8.82□□□□□ -1
GGA3-204ENST00000578208 SRRQ9GZT4 340 aa8.82□□□□□ -1
GGA3-204ENST00000578208 CACNG5Q9UF02 275 aa8.82□□□□□ -1
GGA3-204ENST00000578208 TMEM56-RWDD3S4R434 201 aa8.82□□□□□ -1
GGA3-204ENST00000578208 TMEM213A2RRL7 107 aa8.81□□□□□ -1
GGA3-204ENST00000578208 NAP1L6A6NFF2 107 aa8.81□□□□□ -1
GGA3-204ENST00000578208 NDUFA4O00483 81 aa8.81□□□□□ -1
GGA3-204ENST00000578208 GNG7O60262 68 aa8.81□□□□□ -1
GGA3-204ENST00000578208 SCGB2A1O75556 95 aa8.81□□□□□ -1
GGA3-204ENST00000578208 SULT1A3P0DMM9 295 aa8.81□□□□□ -1
GGA3-204ENST00000578208 SULT1A4P0DMN0 295 aa8.81□□□□□ -1
GGA3-204ENST00000578208 CBLN1P23435 193 aa8.81□□□□□ -1
GGA3-204ENST00000578208 VAMP1P23763 118 aa8.81□□□□□ -1
GGA3-204ENST00000578208 GUCA2BQ16661 112 aa8.81□□□□□ -1
GGA3-204ENST00000578208 OR52E5Q8NH55 327 aa8.81□□□□□ -1
GGA3-204ENST00000578208 CACNG8Q8WXS5 425 aa8.81□□□□□ -1
GGA3-204ENST00000578208 TMEM190Q8WZ59 177 aa8.81□□□□□ -1
GGA3-204ENST00000578208 GPR146Q96CH1 333 aa8.81□□□□□ -1
GGA3-204ENST00000578208 TXN2Q99757 166 aa8.81□□□□□ -1
GGA3-204ENST00000578208 C20orf24Q9BUV8 137 aa8.81□□□□□ -1
GGA3-204ENST00000578208 ZNF436Q9C0F3 470 aaPredicted RBP8.81□□□□□ -1
GGA3-204ENST00000578208 HEYLQ9NQ87 328 aaPredicted RBP8.81□□□□□ -1
GGA3-204ENST00000578208 A0A0B4J2A0 478 aa8.8□□□□□ -1
GGA3-204ENST00000578208 IZUMO1RA6ND01 250 aa8.8□□□□□ -1
GGA3-204ENST00000578208 CENPXA8MT69 81 aa8.8□□□□□ -1
GGA3-204ENST00000578208 I3L2K1 104 aa8.8□□□□□ -1
GGA3-204ENST00000578208 FRMD6-AS1P0C7T7 363 aa8.8□□□□□ -1
GGA3-204ENST00000578208 FCGR2BP31994 310 aaPredicted RBP8.8□□□□□ -1
GGA3-204ENST00000578208 HTR2BP41595 481 aa8.8□□□□□ -1
GGA3-204ENST00000578208 NPBWR1P48145 328 aa8.8□□□□□ -1
GGA3-204ENST00000578208 CCR6P51684 374 aa8.8□□□□□ -1
GGA3-204ENST00000578208 CD81P60033 236 aa8.8□□□□□ -1
GGA3-204ENST00000578208 RBMS2Q15434 407 aaKnown RBP8.8□□□□□ -1
GGA3-204ENST00000578208 DEFB114Q30KQ6 69 aa8.8□□□□□ -1
GGA3-204ENST00000578208 TM4SF20Q53R12 229 aa8.8□□□□□ -1
GGA3-204ENST00000578208 TMEM128Q5BJH2 165 aa8.8□□□□□ -1
GGA3-204ENST00000578208 C11orf87Q6NUJ2 197 aa8.8□□□□□ -1
GGA3-204ENST00000578208 BTNL8Q6UX41 500 aa8.8□□□□□ -1
GGA3-204ENST00000578208 UNQ9165/PRO28630Q6UXU0 137 aa8.8□□□□□ -1
GGA3-204ENST00000578208 ADAMTSL5Q6ZMM2 481 aa8.8□□□□□ -1
GGA3-204ENST00000578208 UXS1Q8NBZ7 420 aa8.8□□□□□ -1
GGA3-204ENST00000578208 DUSP18Q8NEJ0 188 aa8.8□□□□□ -1
GGA3-204ENST00000578208 ASCL2Q99929 193 aa8.8□□□□□ -1
GGA3-204ENST00000578208 HIPK2Q9H2X6 1198 aa8.8□□□□□ -1
GGA3-204ENST00000578208 TUBA4BQ9H853 241 aa8.8□□□□□ -1
GGA3-204ENST00000578208 DAZ1Q9NQZ3 744 aaKnown RBP8.8□□□□□ -1
GGA3-204ENST00000578208 MRPL27Q9P0M9 148 aaKnown RBP8.8□□□□□ -1
GGA3-204ENST00000578208 SHPKQ9UHJ6 478 aa8.8□□□□□ -1
GGA3-204ENST00000578208 DUXBA0A1W2PPF3 345 aa8.79□□□□□ -1
GGA3-204ENST00000578208 RPS10-NUDT3A0A1W2PQS6 291 aa8.79□□□□□ -1
GGA3-204ENST00000578208 IGHV4-30-4P0DP06 118 aa8.79□□□□□ -1
GGA3-204ENST00000578208 RNASE2P10153 161 aaKnown RBP8.79□□□□□ -1
GGA3-204ENST00000578208 EDN2P20800 178 aa8.79□□□□□ -1
GGA3-204ENST00000578208 OPRK1P41145 380 aa8.79□□□□□ -1
GGA3-204ENST00000578208 SUPT4H1P63272 117 aaKnown RBP8.79□□□□□ -1
GGA3-204ENST00000578208 SMCO1Q147U7 214 aa8.79□□□□□ -1
GGA3-204ENST00000578208 AARDQ4LEZ3 155 aa8.79□□□□□ -1
GGA3-204ENST00000578208 Q6ZRM9 215 aa8.79□□□□□ -1
GGA3-204ENST00000578208 RBPMS2Q6ZRY4 209 aaKnown RBP8.79□□□□□ -1
GGA3-204ENST00000578208 NOXA1Q86UR1 476 aa8.79□□□□□ -1
GGA3-204ENST00000578208 CENPSQ8N2Z9 138 aa8.79□□□□□ -1
GGA3-204ENST00000578208 C7orf50Q9BRJ6 194 aaKnown RBP8.79□□□□□ -1
GGA3-204ENST00000578208 CHRDL1Q9BU40 450 aa8.79□□□□□ -1
GGA3-204ENST00000578208 PRR13Q9NZ81 148 aa8.79□□□□□ -1
GGA3-204ENST00000578208 LINC00854A0A1B0GVQ3 168 aa8.78□□□□□ -1
GGA3-204ENST00000578208 F8W735 103 aaPredicted RBP8.78□□□□□ -1
GGA3-204ENST00000578208 YIF1AO95070 293 aa8.78□□□□□ -1
GGA3-204ENST00000578208 NXPH3O95157 252 aa8.78□□□□□ -1
GGA3-204ENST00000578208 IGHV3-48P01763 117 aa8.78□□□□□ -1
GGA3-204ENST00000578208 ADMP35318 185 aa8.78□□□□□ -1
GGA3-204ENST00000578208 BAK1Q16611 211 aa8.78□□□□□ -1
GGA3-204ENST00000578208 ANKRD55Q3KP44 614 aa8.78□□□□□ -1
GGA3-204ENST00000578208 LAMTOR1Q6IAA8 161 aa8.78□□□□□ -1
GGA3-204ENST00000578208 SLC16A13Q7RTY0 426 aa8.78□□□□□ -1
GGA3-204ENST00000578208 LYZL2Q7Z4W2 148 aa8.78□□□□□ -1
GGA3-204ENST00000578208 Q8N1Y9 231 aa8.78□□□□□ -1
GGA3-204ENST00000578208 SLC24A4Q8NFF2 622 aa8.78□□□□□ -1
GGA3-204ENST00000578208 OR1S1Q8NH92 325 aa8.78□□□□□ -1
GGA3-204ENST00000578208 NEURL2Q9BR09 285 aa8.78□□□□□ -1
GGA3-204ENST00000578208 ZMAT4Q9H898 229 aa8.78□□□□□ -1
GGA3-204ENST00000578208 MLXQ9UH92 298 aa8.78□□□□□ -1
GGA3-204ENST00000578208 U3KQK5 164 aa8.78□□□□□ -1
GGA3-204ENST00000578208 SORL1Q92673 2214 aa8.77□□□□□ -1.01
GGA3-204ENST00000578208 TRAV25A0A0B4J276 109 aa8.77□□□□□ -1.01
GGA3-204ENST00000578208 C15orf62A8K5M9 175 aa8.77□□□□□ -1.01
GGA3-204ENST00000578208 A8MZ25 164 aa8.77□□□□□ -1.01
GGA3-204ENST00000578208 K7EMT4 169 aa8.77□□□□□ -1.01
GGA3-204ENST00000578208 SFT2D2O95562 160 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms