RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 GALNT14Q96FL9 552 aa11.07□□□□□ -0.64
RN7SL560P-201ENST00000577943 ZNF486Q96H40 463 aaPredicted RBP11.07□□□□□ -0.64
RN7SL560P-201ENST00000577943 OR10C1Q96KK4 312 aa11.07□□□□□ -0.64
RN7SL560P-201ENST00000577943 NXF2Q9GZY0 626 aaKnown RBP11.07□□□□□ -0.64
RN7SL560P-201ENST00000577943 ALMS1Q8TCU4 4167 aa11.06□□□□□ -0.64
RN7SL560P-201ENST00000577943 IGKV3-7A0A075B6H7 116 aa11.06□□□□□ -0.64
RN7SL560P-201ENST00000577943 TRAV14DV4A0A0A6YYC5 116 aa11.06□□□□□ -0.64
RN7SL560P-201ENST00000577943 CD3DP04234 171 aa11.06□□□□□ -0.64
RN7SL560P-201ENST00000577943 TFPI2P48307 235 aa11.06□□□□□ -0.64
RN7SL560P-201ENST00000577943 AKR1C2P52895 323 aa11.06□□□□□ -0.64
RN7SL560P-201ENST00000577943 SLC35G3Q8N808 338 aa11.06□□□□□ -0.64
RN7SL560P-201ENST00000577943 OR52I2Q8NH67 350 aa11.06□□□□□ -0.64
RN7SL560P-201ENST00000577943 ZNF414Q96IQ9 312 aa11.06□□□□□ -0.64
RN7SL560P-201ENST00000577943 TP53RKQ96S44 253 aa11.06□□□□□ -0.64
RN7SL560P-201ENST00000577943 C6orf62Q9GZU0 229 aaPredicted RBP11.06□□□□□ -0.64
RN7SL560P-201ENST00000577943 EXTL2Q9UBQ6 330 aa11.06□□□□□ -0.64
RN7SL560P-201ENST00000577943 IGHV3OR16-13A0A075B7E8 117 aa11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 IGHV3-74A0A0B4J1X5 117 aa11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 ATG12O94817 140 aa11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 IFNA17P01571 189 aa11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 ZNF182P17025 639 aaPredicted RBP11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 SNCAP37840 140 aa11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 PPP5CP53041 499 aa11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 CMC4P56277 68 aaPredicted RBP11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 TNFRSF9Q07011 255 aa11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 LHFPL1Q86WI0 220 aa11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 APRG1Q8IVJ8 170 aa11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 ARRDC1Q8N5I2 433 aa11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 DUSP18Q8NEJ0 188 aa11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 RNF183Q96D59 192 aa11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 GINS3Q9BRX5 216 aa11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 PDCD10Q9BUL8 212 aa11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 NAA50Q9GZZ1 169 aaKnown RBP11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 MAP6D1Q9H9H5 199 aa11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 MTFP1Q9UDX5 166 aa11.05□□□□□ -0.64
RN7SL560P-201ENST00000577943 AGRNO00468 2067 aa11.04□□□□□ -0.64
RN7SL560P-201ENST00000577943 C3orf85A0A1B0GTC6 90 aa11.04□□□□□ -0.64
RN7SL560P-201ENST00000577943 GABARAPO95166 117 aa11.04□□□□□ -0.64
RN7SL560P-201ENST00000577943 IGKV1-5P01602 117 aa11.04□□□□□ -0.64
RN7SL560P-201ENST00000577943 TBPP20226 339 aa11.04□□□□□ -0.64
RN7SL560P-201ENST00000577943 NPBWR1P48145 328 aa11.04□□□□□ -0.64
RN7SL560P-201ENST00000577943 EWSR1Q01844 656 aaKnown RBP eCLIP11.04□□□□□ -0.64
RN7SL560P-201ENST00000577943 CTF1Q16619 201 aa11.04□□□□□ -0.64
RN7SL560P-201ENST00000577943 TRIM16LQ309B1 348 aa11.04□□□□□ -0.64
RN7SL560P-201ENST00000577943 GBGT1Q8N5D6 347 aa11.04□□□□□ -0.64
RN7SL560P-201ENST00000577943 ZFAND1Q8TCF1 268 aa11.04□□□□□ -0.64
RN7SL560P-201ENST00000577943 COPZ2Q9P299 210 aa11.04□□□□□ -0.64
RN7SL560P-201ENST00000577943 BIRC6Q9NR09 4857 aa11.04□□□□□ -0.64
RN7SL560P-201ENST00000577943 A0A0B4J293 547 aa11.03□□□□□ -0.64
RN7SL560P-201ENST00000577943 NUPR2A6NF83 97 aa11.03□□□□□ -0.64
RN7SL560P-201ENST00000577943 ST8SIA3O43173 380 aa11.03□□□□□ -0.64
RN7SL560P-201ENST00000577943 SUB1P53999 127 aaKnown RBP eCLIP11.03□□□□□ -0.64
RN7SL560P-201ENST00000577943 PAFAH1B2P68402 229 aa11.03□□□□□ -0.64
RN7SL560P-201ENST00000577943 ZNF124Q15973 351 aa11.03□□□□□ -0.64
RN7SL560P-201ENST00000577943 SCGB2B2Q4G0G5 96 aa11.03□□□□□ -0.64
RN7SL560P-201ENST00000577943 TCF24Q7RTU0 167 aa11.03□□□□□ -0.64
RN7SL560P-201ENST00000577943 CCDC71LQ8N9Z2 235 aa11.03□□□□□ -0.64
RN7SL560P-201ENST00000577943 TERB2Q8NHR7 220 aa11.03□□□□□ -0.64
RN7SL560P-201ENST00000577943 RNASE11Q8TAA1 199 aaKnown RBP11.03□□□□□ -0.64
RN7SL560P-201ENST00000577943 C15orf40Q8WUR7 153 aa11.03□□□□□ -0.64
RN7SL560P-201ENST00000577943 ENY2Q9NPA8 101 aa11.03□□□□□ -0.64
RN7SL560P-201ENST00000577943 CORTO00230 105 aa11.02□□□□□ -0.65
RN7SL560P-201ENST00000577943 CD5P06127 495 aa11.02□□□□□ -0.65
RN7SL560P-201ENST00000577943 P0C879 139 aa11.02□□□□□ -0.65
RN7SL560P-201ENST00000577943 HOXA1P49639 335 aaPredicted RBP11.02□□□□□ -0.65
RN7SL560P-201ENST00000577943 TAS2R19P59542 299 aa11.02□□□□□ -0.65
RN7SL560P-201ENST00000577943 SP6Q3SY56 376 aa11.02□□□□□ -0.65
RN7SL560P-201ENST00000577943 GPR107Q5VW38 600 aa11.02□□□□□ -0.65
RN7SL560P-201ENST00000577943 FAM90A2PQ658T7 463 aa11.02□□□□□ -0.65
RN7SL560P-201ENST00000577943 TOMM20LQ6UXN7 152 aa11.02□□□□□ -0.65
RN7SL560P-201ENST00000577943 ZNF600Q6ZNG1 722 aa11.02□□□□□ -0.65
RN7SL560P-201ENST00000577943 TMEM217Q8N7C4 229 aa11.02□□□□□ -0.65
RN7SL560P-201ENST00000577943 TMEM229BQ8NBD8 167 aa11.02□□□□□ -0.65
RN7SL560P-201ENST00000577943 OR4D10Q8NGI6 311 aa11.02□□□□□ -0.65
RN7SL560P-201ENST00000577943 LINC00476Q8WZB0 136 aa11.02□□□□□ -0.65
RN7SL560P-201ENST00000577943 RRNAD1Q96FB5 475 aaKnown RBP11.02□□□□□ -0.65
RN7SL560P-201ENST00000577943 ABHD1Q96SE0 405 aa11.02□□□□□ -0.65
RN7SL560P-201ENST00000577943 CSTL1Q9H114 145 aa11.02□□□□□ -0.65
RN7SL560P-201ENST00000577943 PUS1Q9Y606 427 aaKnown RBP eCLIP11.02□□□□□ -0.65
RN7SL560P-201ENST00000577943 INS-IGF2F8WCM5 200 aa11.01□□□□□ -0.65
RN7SL560P-201ENST00000577943 DNASE2O00115 360 aaPredicted RBP11.01□□□□□ -0.65
RN7SL560P-201ENST00000577943 RAB3DO95716 219 aa11.01□□□□□ -0.65
RN7SL560P-201ENST00000577943 TMEM50AO95807 157 aa11.01□□□□□ -0.65
RN7SL560P-201ENST00000577943 LY6G6CO95867 125 aa11.01□□□□□ -0.65
RN7SL560P-201ENST00000577943 CD74P04233 296 aa11.01□□□□□ -0.65
RN7SL560P-201ENST00000577943 SMIM18P0DKX4 95 aa11.01□□□□□ -0.65
RN7SL560P-201ENST00000577943 RNASE2P10153 161 aaKnown RBP11.01□□□□□ -0.65
RN7SL560P-201ENST00000577943 ETV6P41212 452 aa11.01□□□□□ -0.65
RN7SL560P-201ENST00000577943 RPL11P62913 178 aaKnown RBP11.01□□□□□ -0.65
RN7SL560P-201ENST00000577943 OR13C8Q8NGS7 320 aa11.01□□□□□ -0.65
RN7SL560P-201ENST00000577943 MARCH1Q8TCQ1 289 aa11.01□□□□□ -0.65
RN7SL560P-201ENST00000577943 ST8SIA2Q92186 375 aa11.01□□□□□ -0.65
RN7SL560P-201ENST00000577943 IGHV3-66A0A0C4DH42 116 aa11□□□□□ -0.65
RN7SL560P-201ENST00000577943 MPTX1A8MV57 137 aa11□□□□□ -0.65
RN7SL560P-201ENST00000577943 RGS5O15539 181 aa11□□□□□ -0.65
RN7SL560P-201ENST00000577943 APOHP02749 345 aaPredicted RBP11□□□□□ -0.65
RN7SL560P-201ENST00000577943 ATF4P18848 351 aaPredicted RBP11□□□□□ -0.65
RN7SL560P-201ENST00000577943 UCP1P25874 307 aa11□□□□□ -0.65
RN7SL560P-201ENST00000577943 OPRK1P41145 380 aa11□□□□□ -0.65
RN7SL560P-201ENST00000577943 STEAP1BQ6NZ63 245 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms