RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 NPY1RP25929 384 aa11.2□□□□□ -0.62
SREBF1-217ENST00000577897 SNCAP37840 140 aa11.2□□□□□ -0.62
SREBF1-217ENST00000577897 LGALS4P56470 323 aa11.2□□□□□ -0.62
SREBF1-217ENST00000577897 RPL15P61313 204 aaKnown RBP11.2□□□□□ -0.62
SREBF1-217ENST00000577897 DLK1P80370 383 aa11.2□□□□□ -0.62
SREBF1-217ENST00000577897 OXLD1Q5BKU9 147 aa11.2□□□□□ -0.62
SREBF1-217ENST00000577897 PNKDQ8N490 385 aa11.2□□□□□ -0.62
SREBF1-217ENST00000577897 SLC24A4Q8NFF2 622 aa11.2□□□□□ -0.62
SREBF1-217ENST00000577897 TMEM167AQ8TBQ9 72 aa11.2□□□□□ -0.62
SREBF1-217ENST00000577897 SSMEM1Q8WWF3 244 aa11.2□□□□□ -0.62
SREBF1-217ENST00000577897 RBMXL1Q96E39 390 aaKnown RBP11.2□□□□□ -0.62
SREBF1-217ENST00000577897 OR4C12Q96R67 309 aa11.2□□□□□ -0.62
SREBF1-217ENST00000577897 TREM1Q9NP99 234 aa11.2□□□□□ -0.62
SREBF1-217ENST00000577897 DPM3Q9P2X0 92 aa11.2□□□□□ -0.62
SREBF1-217ENST00000577897 UBE2L5PA0A1B0GUS4 154 aa11.19□□□□□ -0.62
SREBF1-217ENST00000577897 IGKV1-16P04430 117 aa11.19□□□□□ -0.62
SREBF1-217ENST00000577897 IL6RP08887 468 aaPredicted RBP11.19□□□□□ -0.62
SREBF1-217ENST00000577897 SAA1P0DJI8 122 aaPredicted RBP11.19□□□□□ -0.62
SREBF1-217ENST00000577897 FGF7P21781 194 aa11.19□□□□□ -0.62
SREBF1-217ENST00000577897 VDAC2P45880 294 aaPredicted RBP11.19□□□□□ -0.62
SREBF1-217ENST00000577897 REG1BP48304 166 aa11.19□□□□□ -0.62
SREBF1-217ENST00000577897 ARF6P62330 175 aa11.19□□□□□ -0.62
SREBF1-217ENST00000577897 MINOS1Q5TGZ0 78 aa11.19□□□□□ -0.62
SREBF1-217ENST00000577897 BTNL8Q6UX41 500 aa11.19□□□□□ -0.62
SREBF1-217ENST00000577897 Q6ZSV7 163 aa11.19□□□□□ -0.62
SREBF1-217ENST00000577897 MMD2Q8IY49 270 aa11.19□□□□□ -0.62
SREBF1-217ENST00000577897 LYPD6BQ8NI32 183 aa11.19□□□□□ -0.62
SREBF1-217ENST00000577897 HINT2Q9BX68 163 aa11.19□□□□□ -0.62
SREBF1-217ENST00000577897 MINOS1-NBL1R4GNA1 71 aa11.19□□□□□ -0.62
SREBF1-217ENST00000577897 IGHV1-3A0A0C4DH29 117 aa11.18□□□□□ -0.62
SREBF1-217ENST00000577897 C22orf46C9J442 243 aa11.18□□□□□ -0.62
SREBF1-217ENST00000577897 INS-IGF2F8WCM5 200 aa11.18□□□□□ -0.62
SREBF1-217ENST00000577897 CD1BP29016 333 aa11.18□□□□□ -0.62
SREBF1-217ENST00000577897 PAX2Q02962 417 aa11.18□□□□□ -0.62
SREBF1-217ENST00000577897 VWC2Q2TAL6 325 aa11.18□□□□□ -0.62
SREBF1-217ENST00000577897 TMEM41BQ5BJD5 291 aa11.18□□□□□ -0.62
SREBF1-217ENST00000577897 UTF1Q5T230 341 aa11.18□□□□□ -0.62
SREBF1-217ENST00000577897 CENPVQ7Z7K6 275 aaPredicted RBP11.18□□□□□ -0.62
SREBF1-217ENST00000577897 SH3BGRL3Q9H299 93 aa11.18□□□□□ -0.62
SREBF1-217ENST00000577897 TEX50A0A1B0GTY4 177 aa11.17□□□□□ -0.62
SREBF1-217ENST00000577897 C15orf62A8K5M9 175 aa11.17□□□□□ -0.62
SREBF1-217ENST00000577897 IFNA1P01562 189 aa11.17□□□□□ -0.62
SREBF1-217ENST00000577897 IGHV4-59P01825 116 aa11.17□□□□□ -0.62
SREBF1-217ENST00000577897 ACOT6Q3I5F7 207 aaPredicted RBP11.17□□□□□ -0.62
SREBF1-217ENST00000577897 SPINK9Q5DT21 86 aa11.17□□□□□ -0.62
SREBF1-217ENST00000577897 TPTE2P1Q5T6R2 138 aa11.17□□□□□ -0.62
SREBF1-217ENST00000577897 OR4P4Q8NGL7 312 aa11.17□□□□□ -0.62
SREBF1-217ENST00000577897 WWC2-AS2Q96NR7 200 aa11.17□□□□□ -0.62
SREBF1-217ENST00000577897 NPVFQ9HCQ7 196 aa11.17□□□□□ -0.62
SREBF1-217ENST00000577897 KIAA1456Q9P272 454 aa11.17□□□□□ -0.62
SREBF1-217ENST00000577897 TBL2Q9Y4P3 447 aaKnown RBP11.17□□□□□ -0.62
SREBF1-217ENST00000577897 TRAV3A0A0B4J244 114 aa11.16□□□□□ -0.62
SREBF1-217ENST00000577897 A0A1B0GW64 132 aa11.16□□□□□ -0.62
SREBF1-217ENST00000577897 SMCO3A2RU48 225 aa11.16□□□□□ -0.62
SREBF1-217ENST00000577897 PMS2P5A8MQ11 134 aa11.16□□□□□ -0.62
SREBF1-217ENST00000577897 RNASEK-C17orf49H0YIS7 233 aa11.16□□□□□ -0.62
SREBF1-217ENST00000577897 CYB5BO43169 146 aa11.16□□□□□ -0.62
SREBF1-217ENST00000577897 TAGLN2P37802 199 aaKnown RBP11.16□□□□□ -0.62
SREBF1-217ENST00000577897 ARL16Q0P5N6 197 aa11.16□□□□□ -0.62
SREBF1-217ENST00000577897 C2orf83Q53S99 150 aa11.16□□□□□ -0.62
SREBF1-217ENST00000577897 HAPLN4Q86UW8 402 aa11.16□□□□□ -0.62
SREBF1-217ENST00000577897 C11orf44Q8N8P7 122 aa11.16□□□□□ -0.62
SREBF1-217ENST00000577897 EIF5A2Q9GZV4 153 aaKnown RBP11.16□□□□□ -0.62
SREBF1-217ENST00000577897 ZNRD1Q9P1U0 126 aa11.16□□□□□ -0.62
SREBF1-217ENST00000577897 DNAH3Q8TD57 4116 aa11.16□□□□□ -0.62
SREBF1-217ENST00000577897 TRAV1-1A0A0B4J248 108 aa11.15□□□□□ -0.62
SREBF1-217ENST00000577897 TMEM218A2RU14 115 aa11.15□□□□□ -0.62
SREBF1-217ENST00000577897 SRRM4A7MD48 611 aaKnown RBP11.15□□□□□ -0.62
SREBF1-217ENST00000577897 TOX4O94842 621 aa11.15□□□□□ -0.62
SREBF1-217ENST00000577897 BPIFB3P59826 476 aa11.15□□□□□ -0.62
SREBF1-217ENST00000577897 RUNX1Q01196 453 aa11.15□□□□□ -0.62
SREBF1-217ENST00000577897 PLGLAQ15195 96 aa11.15□□□□□ -0.62
SREBF1-217ENST00000577897 ETFRF1Q6IPR1 90 aa11.15□□□□□ -0.62
SREBF1-217ENST00000577897 SVBPQ8N300 66 aa11.15□□□□□ -0.62
SREBF1-217ENST00000577897 BPIFCQ8NFQ6 507 aa11.15□□□□□ -0.62
SREBF1-217ENST00000577897 CACNG8Q8WXS5 425 aa11.15□□□□□ -0.62
SREBF1-217ENST00000577897 ACTR3CQ9C0K3 210 aaPredicted RBP11.15□□□□□ -0.62
SREBF1-217ENST00000577897 NDUFA4L2Q9NRX3 87 aa11.15□□□□□ -0.62
SREBF1-217ENST00000577897 SLC39A9Q9NUM3 307 aa11.15□□□□□ -0.62
SREBF1-217ENST00000577897 F8W036 122 aa11.14□□□□□ -0.63
SREBF1-217ENST00000577897 LY6LH3BQJ8 138 aa11.14□□□□□ -0.63
SREBF1-217ENST00000577897 GPX4P36969 197 aaPredicted RBP11.14□□□□□ -0.63
SREBF1-217ENST00000577897 PPT1P50897 306 aa11.14□□□□□ -0.63
SREBF1-217ENST00000577897 GUK1Q16774 197 aa11.14□□□□□ -0.63
SREBF1-217ENST00000577897 TEPPQ6URK8 271 aa11.14□□□□□ -0.63
SREBF1-217ENST00000577897 VMO1Q7Z5L0 202 aa11.14□□□□□ -0.63
SREBF1-217ENST00000577897 Q8N7P7 452 aa11.14□□□□□ -0.63
SREBF1-217ENST00000577897 RNASEH2CQ8TDP1 164 aaKnown RBP11.14□□□□□ -0.63
SREBF1-217ENST00000577897 SFT2D1Q8WV19 159 aa11.14□□□□□ -0.63
SREBF1-217ENST00000577897 SRSF8Q9BRL6 282 aaKnown RBP11.14□□□□□ -0.63
SREBF1-217ENST00000577897 RSG1Q9BU20 258 aa11.14□□□□□ -0.63
SREBF1-217ENST00000577897 SEC11CQ9BY50 192 aa11.14□□□□□ -0.63
SREBF1-217ENST00000577897 NPCDR1Q9BY65 106 aa11.14□□□□□ -0.63
SREBF1-217ENST00000577897 C16orf95Q9H693 158 aa11.14□□□□□ -0.63
SREBF1-217ENST00000577897 SIRT7Q9NRC8 400 aa11.14□□□□□ -0.63
SREBF1-217ENST00000577897 WDR83OSQ9Y284 106 aa11.14□□□□□ -0.63
SREBF1-217ENST00000577897 ODF3BA8MYP8 253 aa11.13□□□□□ -0.63
SREBF1-217ENST00000577897 CORTO00230 105 aa11.13□□□□□ -0.63
SREBF1-217ENST00000577897 SLC25A17O43808 307 aa11.13□□□□□ -0.63
SREBF1-217ENST00000577897 CA2P00918 260 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms