RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 TEX48A0A1B0GUV7 120 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 H3BRM9 83 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 CDK2AP2O75956 126 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 PTHLHP12272 177 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 M6PRP20645 277 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 CKS2P33552 79 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 EFNB2P52799 333 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 CCL18P55774 89 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 RPL36AP83881 106 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 ICAM4Q14773 271 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 UBE2V2Q15819 145 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 TMEM200BQ69YZ2 307 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 CLEC18BQ6UXF7 455 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 GGNQ86UU5 652 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 VKORC1L1Q8N0U8 176 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 CACNG8Q8WXS5 425 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 GATA6Q92908 595 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 RPL36ALQ969Q0 106 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 RAB24Q969Q5 203 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 AQP10Q96PS8 301 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 FLVCR2Q9UPI3 526 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 ABCA2Q9BZC7 2435 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 ZNF236Q9UL36 1845 aa2.43□□□□□ -2.02
SMCHD1-203ENST00000577880 TRAV8-7A0A075B6U6 113 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 TRAV21A0A0B4J279 112 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 IGHV1-3A0A0C4DH29 117 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 FCN1O00602 326 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 PDE6DO43924 150 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 MMP9P14780 707 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 EVI2AP22794 236 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 UCP1P25874 307 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 EGR4Q05215 589 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 SIGIRRQ6IA17 410 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 C11orf87Q6NUJ2 197 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 LYZL2Q7Z4W2 148 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 C15orf53Q8NAA6 179 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 GLMPQ8WWB7 406 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 ZNF837Q96EG3 531 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 Q96M66 194 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 PRELID3AQ96N28 172 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 TXNDC17Q9BRA2 123 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 RBKSQ9H477 322 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 LAMA4Q16363 1823 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 NAV2Q8IVL1 2488 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 ZFYVE26Q68DK2 2539 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 CHD5Q8TDI0 1954 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 A0A0G2JK05 382 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 APOMO95445 188 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 CD8AP01732 235 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 RNASE1P07998 156 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 ZNF250P15622 560 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 BTF3P20290 206 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 SIGLEC15Q6ZMC9 328 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 ZNF705AQ6ZN79 300 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 CYP2G1PQ6ZSU1 146 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 GOLT1AQ6ZVE7 132 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 RPRMLQ8N4K4 120 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 RELL2Q8NC24 303 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 KLHDC2Q9Y2U9 406 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 MYO5AQ9Y4I1 1855 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 FER1L5A0AVI2 2057 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 FASNP49327 2511 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 TRAV24A0A0B4J272 114 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 A0A1W2PP11 408 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 ANKRD20A5PA0PJZ0 165 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 COX6CP09669 75 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 SAA1P0DJI8 122 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 FABP4P15090 132 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 ZFP36P26651 326 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 FGF8P55075 233 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 TCL1AP56279 114 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 DEFB131AP59861 70 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 DLK1P80370 383 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 SERF2P84101 59 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 COTL1Q14019 142 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 VAMP3Q15836 100 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 DEFB112Q30KQ8 113 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 C1orf100Q5SVJ3 147 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 LINC00299Q6ZSB3 139 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 RNF144BQ7Z419 303 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 PAQR4Q8N4S7 273 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 RNF183Q96D59 192 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 RNF125Q96EQ8 232 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 NUDT11Q96G61 164 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 RCHY1Q96PM5 261 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 AMELYQ99218 206 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 ASCL2Q99929 193 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 TCEAL7Q9BRU2 100 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 NAA50Q9GZZ1 169 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 TMEM222Q9H0R3 208 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 DAZ1Q9NQZ3 744 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 GPR132Q9UNW8 380 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 CBY1Q9Y3M2 126 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 TRAPPC1Q9Y5R8 145 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 LOC285556D6RIA3 1793 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 MTCL1Q9Y4B5 1905 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 SAA2-SAA4A0A096LPE2 208 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 ADARB2-AS1A8MUL3 147 aa2.42□□□□□ -2.02
SMCHD1-203ENST00000577880 INAFM1C9JVW0 142 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms