RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 UBQLN2Q9UHD9 624 aa11.11□□□□□ -0.63
MKS1-205ENST00000577315 TRAV14DV4A0A0A6YYC5 116 aa11.1□□□□□ -0.63
MKS1-205ENST00000577315 CORTO00230 105 aa11.1□□□□□ -0.63
MKS1-205ENST00000577315 YIF1AO95070 293 aa11.1□□□□□ -0.63
MKS1-205ENST00000577315 MT-CO2P00403 227 aa11.1□□□□□ -0.63
MKS1-205ENST00000577315 CD3DP04234 171 aa11.1□□□□□ -0.63
MKS1-205ENST00000577315 SNCAP37840 140 aa11.1□□□□□ -0.63
MKS1-205ENST00000577315 AKR1C2P52895 323 aa11.1□□□□□ -0.63
MKS1-205ENST00000577315 SSBP1Q04837 148 aaKnown RBP11.1□□□□□ -0.63
MKS1-205ENST00000577315 STPG3Q8N7X2 389 aa11.1□□□□□ -0.63
MKS1-205ENST00000577315 SLC35G3Q8N808 338 aa11.1□□□□□ -0.63
MKS1-205ENST00000577315 TMEM229BQ8NBD8 167 aa11.1□□□□□ -0.63
MKS1-205ENST00000577315 DUSP18Q8NEJ0 188 aa11.1□□□□□ -0.63
MKS1-205ENST00000577315 OR52I2Q8NH67 350 aa11.1□□□□□ -0.63
MKS1-205ENST00000577315 TERB2Q8NHR7 220 aa11.1□□□□□ -0.63
MKS1-205ENST00000577315 C3orf85A0A1B0GTC6 90 aa11.09□□□□□ -0.63
MKS1-205ENST00000577315 CHEK1O14757 476 aa11.09□□□□□ -0.63
MKS1-205ENST00000577315 SPRY2O43597 315 aa11.09□□□□□ -0.63
MKS1-205ENST00000577315 ZNF207O43670 478 aaKnown RBP11.09□□□□□ -0.63
MKS1-205ENST00000577315 CD74P04233 296 aa11.09□□□□□ -0.63
MKS1-205ENST00000577315 PAFAH1B2P68402 229 aa11.09□□□□□ -0.63
MKS1-205ENST00000577315 MRPS10P82664 201 aaKnown RBP11.09□□□□□ -0.63
MKS1-205ENST00000577315 ODF3L2Q3SX64 289 aa11.09□□□□□ -0.63
MKS1-205ENST00000577315 GPR107Q5VW38 600 aa11.09□□□□□ -0.63
MKS1-205ENST00000577315 PINX1Q96BK5 328 aaKnown RBP11.09□□□□□ -0.63
MKS1-205ENST00000577315 RHPN1-AS1Q9BWJ2 59 aa11.09□□□□□ -0.63
MKS1-205ENST00000577315 IGHV3OR16-8A0A075B7F1 116 aa11.08□□□□□ -0.64
MKS1-205ENST00000577315 SCGB2A1O75556 95 aa11.08□□□□□ -0.64
MKS1-205ENST00000577315 RAB3DO95716 219 aa11.08□□□□□ -0.64
MKS1-205ENST00000577315 IFNA17P01571 189 aa11.08□□□□□ -0.64
MKS1-205ENST00000577315 ATF4P18848 351 aaPredicted RBP11.08□□□□□ -0.64
MKS1-205ENST00000577315 TNFRSF9Q07011 255 aa11.08□□□□□ -0.64
MKS1-205ENST00000577315 TRIM16LQ309B1 348 aa11.08□□□□□ -0.64
MKS1-205ENST00000577315 RNASE12Q5GAN4 147 aaKnown RBP11.08□□□□□ -0.64
MKS1-205ENST00000577315 RRNAD1Q96FB5 475 aaKnown RBP11.08□□□□□ -0.64
MKS1-205ENST00000577315 TP53RKQ96S44 253 aa11.08□□□□□ -0.64
MKS1-205ENST00000577315 RNF2Q99496 336 aa11.08□□□□□ -0.64
MKS1-205ENST00000577315 NAA50Q9GZZ1 169 aaKnown RBP11.08□□□□□ -0.64
MKS1-205ENST00000577315 ENY2Q9NPA8 101 aa11.08□□□□□ -0.64
MKS1-205ENST00000577315 RABL2AQ9UBK7 228 aaPredicted RBP11.08□□□□□ -0.64
MKS1-205ENST00000577315 RABL2BQ9UNT1 228 aa11.08□□□□□ -0.64
MKS1-205ENST00000577315 GABARAPH6UMI1 98 aa11.07□□□□□ -0.64
MKS1-205ENST00000577315 IGKV1-5P01602 117 aa11.07□□□□□ -0.64
MKS1-205ENST00000577315 P0C879 139 aa11.07□□□□□ -0.64
MKS1-205ENST00000577315 SMIM18P0DKX4 95 aa11.07□□□□□ -0.64
MKS1-205ENST00000577315 PI3P19957 117 aa11.07□□□□□ -0.64
MKS1-205ENST00000577315 UCP1P25874 307 aa11.07□□□□□ -0.64
MKS1-205ENST00000577315 PPP5CP53041 499 aa11.07□□□□□ -0.64
MKS1-205ENST00000577315 MEF2DQ14814 521 aa11.07□□□□□ -0.64
MKS1-205ENST00000577315 STEAP1BQ6NZ63 245 aa11.07□□□□□ -0.64
MKS1-205ENST00000577315 ZNF600Q6ZNG1 722 aa11.07□□□□□ -0.64
MKS1-205ENST00000577315 FAM219AQ8IW50 185 aa11.07□□□□□ -0.64
MKS1-205ENST00000577315 TMEM217Q8N7C4 229 aa11.07□□□□□ -0.64
MKS1-205ENST00000577315 RNF183Q96D59 192 aa11.07□□□□□ -0.64
MKS1-205ENST00000577315 ABHD1Q96SE0 405 aa11.07□□□□□ -0.64
MKS1-205ENST00000577315 MRPS26Q9BYN8 205 aaKnown RBP11.07□□□□□ -0.64
MKS1-205ENST00000577315 DNAH1Q9P2D7 4330 aa11.07□□□□□ -0.64
MKS1-205ENST00000577315 A0A0B4J293 547 aa11.06□□□□□ -0.64
MKS1-205ENST00000577315 RGS5O15539 181 aa11.06□□□□□ -0.64
MKS1-205ENST00000577315 ST8SIA3O43173 380 aa11.06□□□□□ -0.64
MKS1-205ENST00000577315 DEFB135Q30KP9 77 aa11.06□□□□□ -0.64
MKS1-205ENST00000577315 SCGB2B2Q4G0G5 96 aa11.06□□□□□ -0.64
MKS1-205ENST00000577315 PVRIGQ6DKI7 326 aa11.06□□□□□ -0.64
MKS1-205ENST00000577315 GPR141Q7Z602 305 aa11.06□□□□□ -0.64
MKS1-205ENST00000577315 LYG2Q86SG7 212 aa11.06□□□□□ -0.64
MKS1-205ENST00000577315 RNASE11Q8TAA1 199 aaKnown RBP11.06□□□□□ -0.64
MKS1-205ENST00000577315 ZNF414Q96IQ9 312 aa11.06□□□□□ -0.64
MKS1-205ENST00000577315 TMEM231Q9H6L2 316 aa11.06□□□□□ -0.64
MKS1-205ENST00000577315 MAP6D1Q9H9H5 199 aa11.06□□□□□ -0.64
MKS1-205ENST00000577315 C14orf166Q9Y224 244 aaKnown RBP11.06□□□□□ -0.64
MKS1-205ENST00000577315 TRAV2A0A0B4J234 112 aa11.05□□□□□ -0.64
MKS1-205ENST00000577315 NUPR2A6NF83 97 aa11.05□□□□□ -0.64
MKS1-205ENST00000577315 DISC1C4P0D8 188 aa11.05□□□□□ -0.64
MKS1-205ENST00000577315 TMEM50AO95807 157 aa11.05□□□□□ -0.64
MKS1-205ENST00000577315 HOXA1P49639 335 aaPredicted RBP11.05□□□□□ -0.64
MKS1-205ENST00000577315 SURF2Q15527 256 aaPredicted RBP11.05□□□□□ -0.64
MKS1-205ENST00000577315 IZUMO4Q1ZYL8 232 aa11.05□□□□□ -0.64
MKS1-205ENST00000577315 FAM90A2PQ658T7 463 aa11.05□□□□□ -0.64
MKS1-205ENST00000577315 TOMM20LQ6UXN7 152 aa11.05□□□□□ -0.64
MKS1-205ENST00000577315 OR13C8Q8NGS7 320 aa11.05□□□□□ -0.64
MKS1-205ENST00000577315 MARCH1Q8TCQ1 289 aa11.05□□□□□ -0.64
MKS1-205ENST00000577315 VSIRQ9H7M9 311 aa11.05□□□□□ -0.64
MKS1-205ENST00000577315 A0A0J9YWU9 116 aa11.04□□□□□ -0.64
MKS1-205ENST00000577315 A0A1W2PS18 150 aa11.04□□□□□ -0.64
MKS1-205ENST00000577315 DFFBO76075 338 aa11.04□□□□□ -0.64
MKS1-205ENST00000577315 CDS2O95674 445 aa11.04□□□□□ -0.64
MKS1-205ENST00000577315 IGHV3-48P01763 117 aa11.04□□□□□ -0.64
MKS1-205ENST00000577315 RNASE2P10153 161 aaKnown RBP11.04□□□□□ -0.64
MKS1-205ENST00000577315 RPL35AP18077 110 aaKnown RBP11.04□□□□□ -0.64
MKS1-205ENST00000577315 ETV6P41212 452 aa11.04□□□□□ -0.64
MKS1-205ENST00000577315 RPL5P46777 297 aaKnown RBP11.04□□□□□ -0.64
MKS1-205ENST00000577315 DHODHQ02127 395 aa11.04□□□□□ -0.64
MKS1-205ENST00000577315 SP6Q3SY56 376 aa11.04□□□□□ -0.64
MKS1-205ENST00000577315 SPINK9Q5DT21 86 aa11.04□□□□□ -0.64
MKS1-205ENST00000577315 TCF24Q7RTU0 167 aa11.04□□□□□ -0.64
MKS1-205ENST00000577315 OR4D10Q8NGI6 311 aa11.04□□□□□ -0.64
MKS1-205ENST00000577315 OR52E5Q8NH55 327 aa11.04□□□□□ -0.64
MKS1-205ENST00000577315 GATAD1Q8WUU5 269 aa11.04□□□□□ -0.64
MKS1-205ENST00000577315 TMEM222Q9H0R3 208 aa11.04□□□□□ -0.64
MKS1-205ENST00000577315 CSTL1Q9H114 145 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms