RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 GPR146Q96CH1 333 aa17.85■□□□□ 0.45
SNF8-217ENST00000576353 CACNG5Q9UF02 275 aa17.85■□□□□ 0.45
SNF8-217ENST00000576353 OR2T8A6NH00 312 aa17.84■□□□□ 0.45
SNF8-217ENST00000576353 FOLR2P14207 255 aa17.84■□□□□ 0.45
SNF8-217ENST00000576353 LGI3Q8N145 548 aa17.84■□□□□ 0.45
SNF8-217ENST00000576353 DYNLRB2Q8TF09 96 aa17.84■□□□□ 0.45
SNF8-217ENST00000576353 PALMDQ9NP74 551 aa17.84■□□□□ 0.45
SNF8-217ENST00000576353 A0A0B4J2A0 478 aa17.83■□□□□ 0.44
SNF8-217ENST00000576353 A8MWP6 167 aa17.83■□□□□ 0.44
SNF8-217ENST00000576353 I3L2K1 104 aa17.83■□□□□ 0.44
SNF8-217ENST00000576353 MFAP4P55083 255 aa17.83■□□□□ 0.44
SNF8-217ENST00000576353 Q56UQ5 140 aa17.83■□□□□ 0.44
SNF8-217ENST00000576353 ADAMTSL5Q6ZMM2 481 aa17.83■□□□□ 0.44
SNF8-217ENST00000576353 UBAC2Q8NBM4 344 aa17.83■□□□□ 0.44
SNF8-217ENST00000576353 TXN2Q99757 166 aa17.83■□□□□ 0.44
SNF8-217ENST00000576353 TECRQ9NZ01 308 aaKnown RBP17.83■□□□□ 0.44
SNF8-217ENST00000576353 PRR13Q9NZ81 148 aa17.83■□□□□ 0.44
SNF8-217ENST00000576353 SHPKQ9UHJ6 478 aa17.83■□□□□ 0.44
SNF8-217ENST00000576353 MT-CO2P00403 227 aa17.82■□□□□ 0.44
SNF8-217ENST00000576353 SULT1A3P0DMM9 295 aa17.82■□□□□ 0.44
SNF8-217ENST00000576353 SULT1A4P0DMN0 295 aa17.82■□□□□ 0.44
SNF8-217ENST00000576353 CBLN1P23435 193 aa17.82■□□□□ 0.44
SNF8-217ENST00000576353 FCGR2BP31994 310 aaPredicted RBP17.82■□□□□ 0.44
SNF8-217ENST00000576353 RBMS2Q15434 407 aaKnown RBP17.82■□□□□ 0.44
SNF8-217ENST00000576353 PINX1Q96BK5 328 aaKnown RBP17.82■□□□□ 0.44
SNF8-217ENST00000576353 SDHCQ99643 169 aaPredicted RBP17.82■□□□□ 0.44
SNF8-217ENST00000576353 ZNF436Q9C0F3 470 aaPredicted RBP17.82■□□□□ 0.44
SNF8-217ENST00000576353 UFC1Q9Y3C8 167 aa17.82■□□□□ 0.44
SNF8-217ENST00000576353 CENPXA8MT69 81 aa17.81■□□□□ 0.44
SNF8-217ENST00000576353 F8W735 103 aaPredicted RBP17.81■□□□□ 0.44
SNF8-217ENST00000576353 CORTO00230 105 aa17.81■□□□□ 0.44
SNF8-217ENST00000576353 DEFB114Q30KQ6 69 aa17.81■□□□□ 0.44
SNF8-217ENST00000576353 IGHV3-35A0A0C4DH35 117 aa17.8■□□□□ 0.44
SNF8-217ENST00000576353 TMEM213A2RRL7 107 aa17.8■□□□□ 0.44
SNF8-217ENST00000576353 RNASE2P10153 161 aaKnown RBP17.8■□□□□ 0.44
SNF8-217ENST00000576353 VAMP1P23763 118 aa17.8■□□□□ 0.44
SNF8-217ENST00000576353 CCR6P51684 374 aa17.8■□□□□ 0.44
SNF8-217ENST00000576353 ELLP55199 621 aaPredicted RBP17.8■□□□□ 0.44
SNF8-217ENST00000576353 CD300EQ496F6 205 aaPredicted RBP17.8■□□□□ 0.44
SNF8-217ENST00000576353 PVRIGQ6DKI7 326 aa17.8■□□□□ 0.44
SNF8-217ENST00000576353 UNQ9165/PRO28630Q6UXU0 137 aa17.8■□□□□ 0.44
SNF8-217ENST00000576353 LYZL2Q7Z4W2 148 aa17.8■□□□□ 0.44
SNF8-217ENST00000576353 CENPSQ8N2Z9 138 aa17.8■□□□□ 0.44
SNF8-217ENST00000576353 MARC2Q969Z3 335 aa17.8■□□□□ 0.44
SNF8-217ENST00000576353 C7orf50Q9BRJ6 194 aaKnown RBP17.8■□□□□ 0.44
SNF8-217ENST00000576353 CHRDL1Q9BU40 450 aa17.8■□□□□ 0.44
SNF8-217ENST00000576353 DUXBA0A1W2PPF3 345 aa17.79■□□□□ 0.44
SNF8-217ENST00000576353 CEBPZOSA8MTT3 80 aa17.79■□□□□ 0.44
SNF8-217ENST00000576353 NDUFA4O00483 81 aa17.79■□□□□ 0.44
SNF8-217ENST00000576353 NUPL2O15504 423 aaKnown RBP17.79■□□□□ 0.44
SNF8-217ENST00000576353 IL7P13232 177 aa17.79■□□□□ 0.44
SNF8-217ENST00000576353 TM4SF20Q53R12 229 aa17.79■□□□□ 0.44
SNF8-217ENST00000576353 NMSQ5H8A3 153 aa17.79■□□□□ 0.44
SNF8-217ENST00000576353 HEYLQ9NQ87 328 aaPredicted RBP17.79■□□□□ 0.44
SNF8-217ENST00000576353 LINC00854A0A1B0GVQ3 168 aa17.78■□□□□ 0.44
SNF8-217ENST00000576353 IZUMO1RA6ND01 250 aa17.78■□□□□ 0.44
SNF8-217ENST00000576353 NDUFB6O95139 128 aa17.78■□□□□ 0.44
SNF8-217ENST00000576353 CTSGP08311 255 aa17.78■□□□□ 0.44
SNF8-217ENST00000576353 ADMP35318 185 aa17.78■□□□□ 0.44
SNF8-217ENST00000576353 HTR2BP41595 481 aa17.78■□□□□ 0.44
SNF8-217ENST00000576353 RELQ04864 619 aaPredicted RBP17.78■□□□□ 0.44
SNF8-217ENST00000576353 SMCO1Q147U7 214 aa17.78■□□□□ 0.44
SNF8-217ENST00000576353 LINC00299Q6ZSB3 139 aa17.78■□□□□ 0.44
SNF8-217ENST00000576353 GTSCR1Q86UQ5 136 aa17.78■□□□□ 0.44
SNF8-217ENST00000576353 UXS1Q8NBZ7 420 aa17.78■□□□□ 0.44
SNF8-217ENST00000576353 DUSP18Q8NEJ0 188 aa17.78■□□□□ 0.44
SNF8-217ENST00000576353 TMEM190Q8WZ59 177 aa17.78■□□□□ 0.44
SNF8-217ENST00000576353 MRPL27Q9P0M9 148 aaKnown RBP17.78■□□□□ 0.44
SNF8-217ENST00000576353 A0A1B0GU03 582 aa17.77■□□□□ 0.44
SNF8-217ENST00000576353 GNG7O60262 68 aa17.77■□□□□ 0.44
SNF8-217ENST00000576353 SFT2D2O95562 160 aa17.77■□□□□ 0.44
SNF8-217ENST00000576353 IGHV3-48P01763 117 aa17.77■□□□□ 0.44
SNF8-217ENST00000576353 NHLRC4P0CG21 123 aaPredicted RBP17.77■□□□□ 0.44
SNF8-217ENST00000576353 EDN2P20800 178 aa17.77■□□□□ 0.44
SNF8-217ENST00000576353 NPBWR1P48145 328 aa17.77■□□□□ 0.44
SNF8-217ENST00000576353 UBE2MP61081 183 aaKnown RBP17.77■□□□□ 0.44
SNF8-217ENST00000576353 BSXQ3C1V8 233 aa17.77■□□□□ 0.44
SNF8-217ENST00000576353 Q8N1Y9 231 aa17.77■□□□□ 0.44
SNF8-217ENST00000576353 LRTM2Q8N967 370 aa17.77■□□□□ 0.44
SNF8-217ENST00000576353 CACNG8Q8WXS5 425 aa17.77■□□□□ 0.44
SNF8-217ENST00000576353 HIPK2Q9H2X6 1198 aa17.77■□□□□ 0.44
SNF8-217ENST00000576353 A6NHS1 94 aa17.76■□□□□ 0.43
SNF8-217ENST00000576353 C8orf88P0DMB2 117 aa17.76■□□□□ 0.43
SNF8-217ENST00000576353 PPP1R1AQ13522 171 aa17.76■□□□□ 0.43
SNF8-217ENST00000576353 DAZ1Q9NQZ3 744 aaKnown RBP17.76■□□□□ 0.43
SNF8-217ENST00000576353 ANKRD55Q3KP44 614 aa17.75■□□□□ 0.43
SNF8-217ENST00000576353 C20orf24Q9BUV8 137 aa17.75■□□□□ 0.43
SNF8-217ENST00000576353 ZNF785A8K8V0 405 aa17.74■□□□□ 0.43
SNF8-217ENST00000576353 K7EMT4 169 aa17.74■□□□□ 0.43
SNF8-217ENST00000576353 OPRK1P41145 380 aa17.74■□□□□ 0.43
SNF8-217ENST00000576353 TNFRSF9Q07011 255 aa17.74■□□□□ 0.43
SNF8-217ENST00000576353 NOXA1Q86UR1 476 aa17.74■□□□□ 0.43
SNF8-217ENST00000576353 OR1S1Q8NH92 325 aa17.74■□□□□ 0.43
SNF8-217ENST00000576353 HSPB7Q9UBY9 170 aa17.74■□□□□ 0.43
SNF8-217ENST00000576353 MLXQ9UH92 298 aa17.74■□□□□ 0.43
SNF8-217ENST00000576353 NXPH3O95157 252 aa17.73■□□□□ 0.43
SNF8-217ENST00000576353 GUCA2BQ16661 112 aa17.73■□□□□ 0.43
SNF8-217ENST00000576353 CNPY1Q3B7I2 92 aa17.73■□□□□ 0.43
SNF8-217ENST00000576353 C2orf83Q53S99 150 aa17.73■□□□□ 0.43
SNF8-217ENST00000576353 SLC24A4Q8NFF2 622 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms