RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 TM4SF20Q53R12 229 aa10.95□□□□□ -0.66
PCDHGB3-201ENST00000576222 JKAMPQ9P055 326 aa10.95□□□□□ -0.66
PCDHGB3-201ENST00000576222 PPIAL4AQ9Y536 164 aa10.95□□□□□ -0.66
PCDHGB3-201ENST00000576222 RIPPLY3P57055 190 aa10.95□□□□□ -0.66
PCDHGB3-201ENST00000576222 DUTP33316 252 aaKnown RBP10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 CDKN1AP38936 164 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 CFHR1Q03591 330 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 ZNF726P1Q15940 193 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 SPATA31B1PQ5VZV4 182 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 NUDT11Q96G61 164 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 PLA2G2EQ9NZK7 142 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 ROS1P08922 2347 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 HELZP42694 1942 aaKnown RBP10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 C15orf61A6NNL5 157 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 PEAR1Q5VY43 1037 aaPredicted RBP10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 OR52E5Q8NH55 327 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 ZNF502Q8TBZ5 544 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 PRELID3AQ96N28 172 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 SEPSECSQ9HD40 501 aaKnown RBP10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 RNF115Q9Y4L5 304 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 APC2O95996 2303 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 FAM181BA6NEQ2 426 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 SELLP14151 372 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 RELQ04864 619 aaPredicted RBP10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 ASCL5Q7RTU5 278 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 C5orf30Q96GV9 206 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 FCGR2BP31994 310 aaPredicted RBP10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 CX3CL1P78423 397 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 MPV17L2Q567V2 206 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 SAMD13Q5VXD3 122 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 CRIM1Q9NZV1 1036 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 LY96Q9Y6Y9 160 aa10.94□□□□□ -0.66
PCDHGB3-201ENST00000576222 C2orf83Q53S99 150 aa10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 OSR1Q8TAX0 266 aaPredicted RBP10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 LOXL4Q96JB6 756 aa10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 C18orf15Q96N68 181 aa10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 TRAV30A0A087WSZ9 112 aa10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 TRBV6-6A0A0A6YYG2 114 aa10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 IGHV1-69-2A0A0G2JMI3 117 aa10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 RPS20P60866 119 aaKnown RBP10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 MBNL2Q5VZF2 373 aaKnown RBP10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 OR2K2Q8NGT1 345 aa10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 FNDC1Q4ZHG4 1894 aaPredicted RBP10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 GNG5P63218 68 aa10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 Q0VG73 95 aa10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 GAGE1Q13065 139 aa10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 TMEM30BQ3MIR4 351 aa10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 PMS2CLQ68D20 193 aa10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 TSKUQ8WUA8 353 aa10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 MGST2Q99735 147 aa10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 COX11Q9Y6N1 276 aa10.93□□□□□ -0.66
PCDHGB3-201ENST00000576222 IQCF6A8MYZ5 107 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 PYYP10082 97 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 AKAP6Q13023 2319 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 SRCAPQ6ZRS2 3230 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 LOC102723996A0A087X1L8 192 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 IGKV1-6A0A0C4DH72 117 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 C19orf67A6NJJ6 358 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 J3KRW8 73 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 YPEL1O60688 119 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 DLX1P56177 255 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 FOXF2Q12947 444 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 MORN2Q502X0 79 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 DMRTC2Q8IXT2 367 aaPredicted RBP10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 FMC1Q96HJ9 113 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 YPEL2Q96QA6 119 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 A0A1B0GWJ7 208 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 FAM90A9PA6NNJ1 464 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 SEC11AP67812 179 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 ZNF585BQ52M93 769 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 CHCHD1Q96BP2 118 aaKnown RBP10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 FBXL7Q9UJT9 491 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 DOCK7Q96N67 2140 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 TRAV8-6A0A0B4J262 113 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 CELA3BP08861 270 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 UNQ6494/PRO21346Q6UXR6 183 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 Q6ZWC4 215 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 MTURNQ8N3F0 131 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 NUDT10Q8NFP7 164 aa10.92□□□□□ -0.66
PCDHGB3-201ENST00000576222 TFF1P04155 84 aa10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 MGPP08493 103 aa10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 AREGP15514 252 aa10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 FOXG1P55316 489 aaPredicted RBP10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 C20orf204Q6ZNR8 217 aa10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 EPDR1Q9UM22 224 aa10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 MRPS16Q9Y3D3 137 aaKnown RBP10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 GOSR1O95249 250 aa10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 FOXL2NBQ6ZUU3 175 aa10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 OR4A5Q8NH83 315 aa10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 OR9G1Q8NH87 305 aa10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 MRPL27Q9P0M9 148 aaKnown RBP10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 ZNF257Q9Y2Q1 563 aa10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 PLXNA2O75051 1894 aa10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 PRR33A8MZF0 331 aa10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 UPK2O00526 184 aa10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 FOXH1O75593 365 aa10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 Q6ZT83 130 aa10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 TMEM186Q96B77 213 aa10.91□□□□□ -0.66
PCDHGB3-201ENST00000576222 MS4A6AQ9H2W1 248 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms