RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 ZNF114Q8NC26 417 aa11.59□□□□□ -0.55
SMG6-220ENST00000576218 LHFPL5Q8TAF8 219 aa11.59□□□□□ -0.55
SMG6-220ENST00000576218 CACNG8Q8WXS5 425 aa11.59□□□□□ -0.55
SMG6-220ENST00000576218 IL22RA2Q969J5 263 aa11.59□□□□□ -0.55
SMG6-220ENST00000576218 SLC25A21Q9BQT8 299 aaPredicted RBP11.59□□□□□ -0.55
SMG6-220ENST00000576218 SRRQ9GZT4 340 aa11.59□□□□□ -0.55
SMG6-220ENST00000576218 PRR13Q9NZ81 148 aa11.59□□□□□ -0.55
SMG6-220ENST00000576218 DNAH3Q8TD57 4116 aa11.58□□□□□ -0.56
SMG6-220ENST00000576218 LINC00854A0A1B0GVQ3 168 aa11.58□□□□□ -0.56
SMG6-220ENST00000576218 CENPXA8MT69 81 aa11.58□□□□□ -0.56
SMG6-220ENST00000576218 K7EIM0 57 aa11.58□□□□□ -0.56
SMG6-220ENST00000576218 CORTO00230 105 aa11.58□□□□□ -0.56
SMG6-220ENST00000576218 SCGB2A1O75556 95 aa11.58□□□□□ -0.56
SMG6-220ENST00000576218 YIF1AO95070 293 aa11.58□□□□□ -0.56
SMG6-220ENST00000576218 NXPH3O95157 252 aa11.58□□□□□ -0.56
SMG6-220ENST00000576218 SPCS3P61009 180 aa11.58□□□□□ -0.56
SMG6-220ENST00000576218 RELQ04864 619 aaPredicted RBP11.58□□□□□ -0.56
SMG6-220ENST00000576218 LGI3Q8N145 548 aa11.58□□□□□ -0.56
SMG6-220ENST00000576218 TMEM230Q96A57 120 aa11.58□□□□□ -0.56
SMG6-220ENST00000576218 GPR146Q96CH1 333 aa11.58□□□□□ -0.56
SMG6-220ENST00000576218 GALNT14Q96FL9 552 aa11.58□□□□□ -0.56
SMG6-220ENST00000576218 ATP6V0BQ99437 205 aa11.58□□□□□ -0.56
SMG6-220ENST00000576218 TUBA4BQ9H853 241 aa11.58□□□□□ -0.56
SMG6-220ENST00000576218 HEYLQ9NQ87 328 aaPredicted RBP11.58□□□□□ -0.56
SMG6-220ENST00000576218 A8MWP6 167 aa11.57□□□□□ -0.56
SMG6-220ENST00000576218 IGHV3-48P01763 117 aa11.57□□□□□ -0.56
SMG6-220ENST00000576218 NHLRC4P0CG21 123 aaPredicted RBP11.57□□□□□ -0.56
SMG6-220ENST00000576218 SULT1A3P0DMM9 295 aa11.57□□□□□ -0.56
SMG6-220ENST00000576218 SULT1A4P0DMN0 295 aa11.57□□□□□ -0.56
SMG6-220ENST00000576218 CBLN1P23435 193 aa11.57□□□□□ -0.56
SMG6-220ENST00000576218 OPRK1P41145 380 aa11.57□□□□□ -0.56
SMG6-220ENST00000576218 CD81P60033 236 aa11.57□□□□□ -0.56
SMG6-220ENST00000576218 TMEM187Q14656 261 aa11.57□□□□□ -0.56
SMG6-220ENST00000576218 TM4SF20Q53R12 229 aa11.57□□□□□ -0.56
SMG6-220ENST00000576218 C11orf87Q6NUJ2 197 aa11.57□□□□□ -0.56
SMG6-220ENST00000576218 UNQ9165/PRO28630Q6UXU0 137 aa11.57□□□□□ -0.56
SMG6-220ENST00000576218 UXS1Q8NBZ7 420 aa11.57□□□□□ -0.56
SMG6-220ENST00000576218 DUSP18Q8NEJ0 188 aa11.57□□□□□ -0.56
SMG6-220ENST00000576218 MARC2Q969Z3 335 aa11.57□□□□□ -0.56
SMG6-220ENST00000576218 CACFD1Q9UGQ2 172 aa11.57□□□□□ -0.56
SMG6-220ENST00000576218 SELENOKQ9Y6D0 94 aa11.57□□□□□ -0.56
SMG6-220ENST00000576218 TMEM56-RWDD3S4R434 201 aa11.57□□□□□ -0.56
SMG6-220ENST00000576218 TMEM213A2RRL7 107 aa11.56□□□□□ -0.56
SMG6-220ENST00000576218 IZUMO1RA6ND01 250 aa11.56□□□□□ -0.56
SMG6-220ENST00000576218 NAP1L6A6NFF2 107 aa11.56□□□□□ -0.56
SMG6-220ENST00000576218 NDUFA4O00483 81 aa11.56□□□□□ -0.56
SMG6-220ENST00000576218 FRMD6-AS1P0C7T7 363 aa11.56□□□□□ -0.56
SMG6-220ENST00000576218 EDN2P20800 178 aa11.56□□□□□ -0.56
SMG6-220ENST00000576218 NPBWR1P48145 328 aa11.56□□□□□ -0.56
SMG6-220ENST00000576218 RBMS2Q15434 407 aaKnown RBP11.56□□□□□ -0.56
SMG6-220ENST00000576218 DEFB114Q30KQ6 69 aa11.56□□□□□ -0.56
SMG6-220ENST00000576218 TMEM128Q5BJH2 165 aa11.56□□□□□ -0.56
SMG6-220ENST00000576218 BTNL8Q6UX41 500 aa11.56□□□□□ -0.56
SMG6-220ENST00000576218 RBPMS2Q6ZRY4 209 aaKnown RBP11.56□□□□□ -0.56
SMG6-220ENST00000576218 CENPSQ8N2Z9 138 aa11.56□□□□□ -0.56
SMG6-220ENST00000576218 OR1S1Q8NH92 325 aa11.56□□□□□ -0.56
SMG6-220ENST00000576218 TMEM190Q8WZ59 177 aa11.56□□□□□ -0.56
SMG6-220ENST00000576218 TXN2Q99757 166 aa11.56□□□□□ -0.56
SMG6-220ENST00000576218 CHRDL1Q9BU40 450 aa11.56□□□□□ -0.56
SMG6-220ENST00000576218 ZNF436Q9C0F3 470 aaPredicted RBP11.56□□□□□ -0.56
SMG6-220ENST00000576218 HIPK2Q9H2X6 1198 aa11.56□□□□□ -0.56
SMG6-220ENST00000576218 DAZ1Q9NQZ3 744 aaKnown RBP11.56□□□□□ -0.56
SMG6-220ENST00000576218 IGHV3OR16-8A0A075B7F1 116 aa11.55□□□□□ -0.56
SMG6-220ENST00000576218 A0A0B4J2A0 478 aa11.55□□□□□ -0.56
SMG6-220ENST00000576218 I3L2K1 104 aa11.55□□□□□ -0.56
SMG6-220ENST00000576218 IGHV4-30-4P0DP06 118 aa11.55□□□□□ -0.56
SMG6-220ENST00000576218 HTR2BP41595 481 aa11.55□□□□□ -0.56
SMG6-220ENST00000576218 CCR6P51684 374 aa11.55□□□□□ -0.56
SMG6-220ENST00000576218 ELLP55199 621 aaPredicted RBP11.55□□□□□ -0.56
SMG6-220ENST00000576218 Q6ZRM9 215 aa11.55□□□□□ -0.56
SMG6-220ENST00000576218 OR52E5Q8NH55 327 aa11.55□□□□□ -0.56
SMG6-220ENST00000576218 MRPL27Q9P0M9 148 aaKnown RBP11.55□□□□□ -0.56
SMG6-220ENST00000576218 SHPKQ9UHJ6 478 aa11.55□□□□□ -0.56
SMG6-220ENST00000576218 RPS10-NUDT3A0A1W2PQS6 291 aa11.54□□□□□ -0.56
SMG6-220ENST00000576218 INS-IGF2F8WCM5 200 aa11.54□□□□□ -0.56
SMG6-220ENST00000576218 ZNF207O43670 478 aaKnown RBP11.54□□□□□ -0.56
SMG6-220ENST00000576218 SCAF4O95104 1147 aaKnown RBP11.54□□□□□ -0.56
SMG6-220ENST00000576218 RNASE2P10153 161 aaKnown RBP11.54□□□□□ -0.56
SMG6-220ENST00000576218 SUPT4H1P63272 117 aaKnown RBP11.54□□□□□ -0.56
SMG6-220ENST00000576218 SMCO1Q147U7 214 aa11.54□□□□□ -0.56
SMG6-220ENST00000576218 BAK1Q16611 211 aa11.54□□□□□ -0.56
SMG6-220ENST00000576218 ADAMTSL5Q6ZMM2 481 aa11.54□□□□□ -0.56
SMG6-220ENST00000576218 SLC16A13Q7RTY0 426 aa11.54□□□□□ -0.56
SMG6-220ENST00000576218 LYZL2Q7Z4W2 148 aa11.54□□□□□ -0.56
SMG6-220ENST00000576218 SLC24A4Q8NFF2 622 aa11.54□□□□□ -0.56
SMG6-220ENST00000576218 WDR89Q96FK6 387 aaPredicted RBP11.54□□□□□ -0.56
SMG6-220ENST00000576218 NEURL2Q9BR09 285 aa11.54□□□□□ -0.56
SMG6-220ENST00000576218 ZMAT4Q9H898 229 aa11.54□□□□□ -0.56
SMG6-220ENST00000576218 IFNA10P01566 189 aa11.53□□□□□ -0.56
SMG6-220ENST00000576218 ANKRD55Q3KP44 614 aa11.53□□□□□ -0.56
SMG6-220ENST00000576218 LAMTOR1Q6IAA8 161 aa11.53□□□□□ -0.56
SMG6-220ENST00000576218 NOXA1Q86UR1 476 aa11.53□□□□□ -0.56
SMG6-220ENST00000576218 TMEM61Q8N0U2 210 aa11.53□□□□□ -0.56
SMG6-220ENST00000576218 OR52B4Q8NGK2 314 aa11.53□□□□□ -0.56
SMG6-220ENST00000576218 MLXQ9UH92 298 aa11.53□□□□□ -0.56
SMG6-220ENST00000576218 U3KQK5 164 aa11.53□□□□□ -0.56
SMG6-220ENST00000576218 DUXBA0A1W2PPF3 345 aa11.52□□□□□ -0.57
SMG6-220ENST00000576218 F8W735 103 aaPredicted RBP11.52□□□□□ -0.57
SMG6-220ENST00000576218 SFT2D2O95562 160 aa11.52□□□□□ -0.57
SMG6-220ENST00000576218 CTSGP08311 255 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms