RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 C9orf66Q5T8R8 295 aa7.36□□□□□ -1.23
CCDC40-214ENST00000575431 SAMD5Q5TGI4 173 aa7.36□□□□□ -1.23
CCDC40-214ENST00000575431 PVRIGQ6DKI7 326 aa7.36□□□□□ -1.23
CCDC40-214ENST00000575431 CLEC19AQ6UXS0 136 aa7.36□□□□□ -1.23
CCDC40-214ENST00000575431 C19orf35Q6ZS72 473 aa7.36□□□□□ -1.23
CCDC40-214ENST00000575431 C12orf45Q8N5I9 185 aaPredicted RBP7.36□□□□□ -1.23
CCDC40-214ENST00000575431 SLC24A4Q8NFF2 622 aa7.36□□□□□ -1.23
CCDC40-214ENST00000575431 ZNF502Q8TBZ5 544 aa7.36□□□□□ -1.23
CCDC40-214ENST00000575431 DTD1Q8TEA8 209 aa7.36□□□□□ -1.23
CCDC40-214ENST00000575431 SCARB1Q8WTV0 552 aa7.36□□□□□ -1.23
CCDC40-214ENST00000575431 DCUN1D4Q92564 292 aa7.36□□□□□ -1.23
CCDC40-214ENST00000575431 MARVELD1Q9BSK0 173 aa7.36□□□□□ -1.23
CCDC40-214ENST00000575431 ELOVL1Q9BW60 279 aa7.36□□□□□ -1.23
CCDC40-214ENST00000575431 C21orf62Q9NYP8 219 aa7.36□□□□□ -1.23
CCDC40-214ENST00000575431 DMRT1Q9Y5R6 373 aa7.36□□□□□ -1.23
CCDC40-214ENST00000575431 RPS10-NUDT3A0A1W2PQS6 291 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 SNRPGP15A8MWD9 76 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 INMT-MINDY4F8WBC2 141 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 I3L2K1 104 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 WIPF1O43516 503 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 SCGB2A1O75556 95 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 ADAP1O75689 374 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 PTTG1O95997 202 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 MT-CO2P00403 227 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 CLEC3BP05452 202 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 RNASE2P10153 161 aaKnown RBP7.35□□□□□ -1.23
CCDC40-214ENST00000575431 IGLL1P15814 213 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 ARL3P36405 182 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 SLURP1P55000 103 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 RPP30P78346 268 aaKnown RBP7.35□□□□□ -1.23
CCDC40-214ENST00000575431 DEFA5Q01523 94 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 KLF5Q13887 457 aaPredicted RBP7.35□□□□□ -1.23
CCDC40-214ENST00000575431 FAM106AQ4KMX7 169 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 C2orf83Q53S99 150 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 ETFRF1Q6IPR1 90 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 SPSB3Q6PJ21 355 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 GPHB5Q86YW7 130 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 C1QL4Q86Z23 238 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 RNASEH2CQ8TDP1 164 aaKnown RBP7.35□□□□□ -1.23
CCDC40-214ENST00000575431 DLX4Q92988 240 aaPredicted RBP7.35□□□□□ -1.23
CCDC40-214ENST00000575431 MISP3Q96FF7 219 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 BSCL2Q96G97 398 aaPredicted RBP7.35□□□□□ -1.23
CCDC40-214ENST00000575431 CCDC140Q96MF4 163 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 PEMTQ9UBM1 199 aa7.35□□□□□ -1.23
CCDC40-214ENST00000575431 MFSD2BA6NFX1 497 aa7.34□□□□□ -1.23
CCDC40-214ENST00000575431 SEC14L6B5MCN3 397 aa7.34□□□□□ -1.23
CCDC40-214ENST00000575431 K7EIM0 57 aa7.34□□□□□ -1.23
CCDC40-214ENST00000575431 LGALS9O00182 355 aa7.34□□□□□ -1.23
CCDC40-214ENST00000575431 BMPR1BO00238 502 aa7.34□□□□□ -1.23
CCDC40-214ENST00000575431 NUPL2O15504 423 aaKnown RBP7.34□□□□□ -1.23
CCDC40-214ENST00000575431 SYNGR2O43760 224 aa7.34□□□□□ -1.23
CCDC40-214ENST00000575431 IFNA10P01566 189 aa7.34□□□□□ -1.23
CCDC40-214ENST00000575431 TRBV12-3P01733 135 aa7.34□□□□□ -1.23
CCDC40-214ENST00000575431 SLC25A4P12235 298 aa7.34□□□□□ -1.23
CCDC40-214ENST00000575431 NPY1RP25929 384 aa7.34□□□□□ -1.23
CCDC40-214ENST00000575431 NKX2-1P43699 371 aaPredicted RBP7.34□□□□□ -1.23
CCDC40-214ENST00000575431 NPBWR1P48145 328 aa7.34□□□□□ -1.23
CCDC40-214ENST00000575431 ID3Q02535 119 aa7.34□□□□□ -1.23
CCDC40-214ENST00000575431 IAH1Q2TAA2 248 aaPredicted RBP7.34□□□□□ -1.23
CCDC40-214ENST00000575431 OXLD1Q5BKU9 147 aa7.34□□□□□ -1.23
CCDC40-214ENST00000575431 KPRPQ5T749 579 aaPredicted RBP7.34□□□□□ -1.23
CCDC40-214ENST00000575431 ACSM6Q6P461 480 aa7.34□□□□□ -1.23
CCDC40-214ENST00000575431 OR52B4Q8NGK2 314 aa7.34□□□□□ -1.23
CCDC40-214ENST00000575431 PINX1Q96BK5 328 aaKnown RBP7.34□□□□□ -1.23
CCDC40-214ENST00000575431 OR4C12Q96R67 309 aa7.34□□□□□ -1.23
CCDC40-214ENST00000575431 RBKSQ9H477 322 aa7.34□□□□□ -1.23
CCDC40-214ENST00000575431 DNHD1Q96M86 4753 aa7.33□□□□□ -1.24
CCDC40-214ENST00000575431 TRAV30A0A087WSZ9 112 aa7.33□□□□□ -1.24
CCDC40-214ENST00000575431 WRBO00258 174 aa7.33□□□□□ -1.24
CCDC40-214ENST00000575431 TGOLN2O43493 480 aa7.33□□□□□ -1.24
CCDC40-214ENST00000575431 GNG7O60262 68 aa7.33□□□□□ -1.24
CCDC40-214ENST00000575431 NXPH3O95157 252 aa7.33□□□□□ -1.24
CCDC40-214ENST00000575431 GPR183P32249 361 aa7.33□□□□□ -1.24
CCDC40-214ENST00000575431 OPRK1P41145 380 aa7.33□□□□□ -1.24
CCDC40-214ENST00000575431 SYNJ2BPP57105 145 aa7.33□□□□□ -1.24
CCDC40-214ENST00000575431 RAB11AP62491 216 aa7.33□□□□□ -1.24
CCDC40-214ENST00000575431 RELQ04864 619 aaPredicted RBP7.33□□□□□ -1.24
CCDC40-214ENST00000575431 DCTN2Q13561 401 aaKnown RBP7.33□□□□□ -1.24
CCDC40-214ENST00000575431 Q56UQ5 140 aa7.33□□□□□ -1.24
CCDC40-214ENST00000575431 GSG1LQ6UXU4 331 aa7.33□□□□□ -1.24
CCDC40-214ENST00000575431 REC114Q7Z4M0 266 aa7.33□□□□□ -1.24
CCDC40-214ENST00000575431 UXS1Q8NBZ7 420 aa7.33□□□□□ -1.24
CCDC40-214ENST00000575431 OR9G4Q8NGQ1 327 aa7.33□□□□□ -1.24
CCDC40-214ENST00000575431 SEC22CQ9BRL7 303 aa7.33□□□□□ -1.24
CCDC40-214ENST00000575431 SIGLEC8Q9NYZ4 499 aa7.33□□□□□ -1.24
CCDC40-214ENST00000575431 S4R3C0 116 aa7.33□□□□□ -1.24
CCDC40-214ENST00000575431 C5orf51A6NDU8 294 aa7.32□□□□□ -1.24
CCDC40-214ENST00000575431 PPP5D1E7EU14 171 aa7.32□□□□□ -1.24
CCDC40-214ENST00000575431 G3V4G9 280 aa7.32□□□□□ -1.24
CCDC40-214ENST00000575431 OR2C1O95371 312 aa7.32□□□□□ -1.24
CCDC40-214ENST00000575431 IGHV3-23P01764 117 aa7.32□□□□□ -1.24
CCDC40-214ENST00000575431 IFNA4P05014 189 aa7.32□□□□□ -1.24
CCDC40-214ENST00000575431 ELLP55199 621 aaPredicted RBP7.32□□□□□ -1.24
CCDC40-214ENST00000575431 EGFEM1PQ0D2K5 195 aa7.32□□□□□ -1.24
CCDC40-214ENST00000575431 BEAN1Q3B7T3 259 aa7.32□□□□□ -1.24
CCDC40-214ENST00000575431 ZBTB8BQ8NAP8 495 aaPredicted RBP7.32□□□□□ -1.24
CCDC40-214ENST00000575431 UBAC2Q8NBM4 344 aa7.32□□□□□ -1.24
CCDC40-214ENST00000575431 OR4D5Q8NGN0 318 aa7.32□□□□□ -1.24
CCDC40-214ENST00000575431 OR10C1Q96KK4 312 aa7.32□□□□□ -1.24
CCDC40-214ENST00000575431 C2orf50Q96LR7 162 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms