RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 TRIM16LQ309B1 348 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 DEFB114Q30KQ6 69 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 TM4SF20Q53R12 229 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 TMEM268Q5VZI3 342 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 LINC00322Q6ZN03 302 aaPredicted RBP6.52□□□□□ -1.37
SMG6-216ENST00000575176 LYZL2Q7Z4W2 148 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 TMEM61Q8N0U2 210 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 TOMM5Q8N4H5 51 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 OR52E5Q8NH55 327 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 OR4A16Q8NH70 328 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 BSCL2Q96G97 398 aaPredicted RBP6.52□□□□□ -1.37
SMG6-216ENST00000575176 OR10C1Q96KK4 312 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 HINT2Q9BX68 163 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 WFDC10AQ9H1F0 79 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 ZFAND3Q9H8U3 227 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 PLEKHA3Q9HB20 300 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 MCUBQ9NWR8 336 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 C21orf62Q9NYP8 219 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 HSPB7Q9UBY9 170 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 SCP2D1Q9UJQ7 156 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 SELENOKQ9Y6D0 94 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 A0A0B4J2A0 478 aa6.51□□□□□ -1.37
SMG6-216ENST00000575176 SCAF4O95104 1147 aaKnown RBP6.51□□□□□ -1.37
SMG6-216ENST00000575176 NDUFB6O95139 128 aa6.51□□□□□ -1.37
SMG6-216ENST00000575176 NXPH3O95157 252 aa6.51□□□□□ -1.37
SMG6-216ENST00000575176 IGHV3-48P01763 117 aa6.51□□□□□ -1.37
SMG6-216ENST00000575176 FRMD6-AS1P0C7T7 363 aa6.51□□□□□ -1.37
SMG6-216ENST00000575176 IGHV4-30-4P0DP06 118 aa6.51□□□□□ -1.37
SMG6-216ENST00000575176 DEFA4P12838 97 aa6.51□□□□□ -1.37
SMG6-216ENST00000575176 CBLN1P23435 193 aa6.51□□□□□ -1.37
SMG6-216ENST00000575176 S100A5P33763 92 aa6.51□□□□□ -1.37
SMG6-216ENST00000575176 SPANXN2Q5MJ10 180 aa6.51□□□□□ -1.37
SMG6-216ENST00000575176 SBSPONQ8IVN8 264 aa6.51□□□□□ -1.37
SMG6-216ENST00000575176 OR2K2Q8NGT1 345 aa6.51□□□□□ -1.37
SMG6-216ENST00000575176 WDR89Q96FK6 387 aaPredicted RBP6.51□□□□□ -1.37
SMG6-216ENST00000575176 OR4C12Q96R67 309 aa6.51□□□□□ -1.37
SMG6-216ENST00000575176 ELOVL1Q9BW60 279 aa6.51□□□□□ -1.37
SMG6-216ENST00000575176 NDUFA13Q9P0J0 144 aa6.51□□□□□ -1.37
SMG6-216ENST00000575176 SHPKQ9UHJ6 478 aa6.51□□□□□ -1.37
SMG6-216ENST00000575176 FLVCR2Q9UPI3 526 aa6.51□□□□□ -1.37
SMG6-216ENST00000575176 IGHV3OR16-8A0A075B7F1 116 aa6.5□□□□□ -1.37
SMG6-216ENST00000575176 PRSS46E5RG02 174 aa6.5□□□□□ -1.37
SMG6-216ENST00000575176 IGKV1-17P01599 117 aa6.5□□□□□ -1.37
SMG6-216ENST00000575176 CD7P09564 240 aa6.5□□□□□ -1.37
SMG6-216ENST00000575176 ELLP55199 621 aaPredicted RBP6.5□□□□□ -1.37
SMG6-216ENST00000575176 SPCS3P61009 180 aa6.5□□□□□ -1.37
SMG6-216ENST00000575176 TNFRSF9Q07011 255 aa6.5□□□□□ -1.37
SMG6-216ENST00000575176 MLANAQ16655 118 aa6.5□□□□□ -1.37
SMG6-216ENST00000575176 CNPY1Q3B7I2 92 aa6.5□□□□□ -1.37
SMG6-216ENST00000575176 TMEM128Q5BJH2 165 aa6.5□□□□□ -1.37
SMG6-216ENST00000575176 SLC25A24Q6NUK1 477 aa6.5□□□□□ -1.37
SMG6-216ENST00000575176 BTNL8Q6UX41 500 aa6.5□□□□□ -1.37
SMG6-216ENST00000575176 SLC25A21Q9BQT8 299 aaPredicted RBP6.5□□□□□ -1.37
SMG6-216ENST00000575176 TM2D3Q9BRN9 247 aa6.5□□□□□ -1.37
SMG6-216ENST00000575176 PEMTQ9UBM1 199 aa6.5□□□□□ -1.37
SMG6-216ENST00000575176 ZMAT5Q9UDW3 170 aaKnown RBP6.5□□□□□ -1.37
SMG6-216ENST00000575176 TBC1D24Q9ULP9 559 aa6.5□□□□□ -1.37
SMG6-216ENST00000575176 SMAD5-AS1Q9Y6J3 95 aa6.5□□□□□ -1.37
SMG6-216ENST00000575176 ALMS1Q8TCU4 4167 aa6.5□□□□□ -1.37
SMG6-216ENST00000575176 HYDINQ4G0P3 5121 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 A0A1B0GU03 582 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 DUXBA0A1W2PPF3 345 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 MPTX1A8MV57 137 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 NDUFA4O00483 81 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 SFT2D2O95562 160 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 AKR1C4P17516 323 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 FAUP35544 74 aaKnown RBP6.49□□□□□ -1.37
SMG6-216ENST00000575176 AP3S2P59780 193 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 IFITM3Q01628 133 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 RBMS2Q15434 407 aaKnown RBP6.49□□□□□ -1.37
SMG6-216ENST00000575176 C2orf83Q53S99 150 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 LCN12Q6JVE5 192 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 SPSB3Q6PJ21 355 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 LINC00299Q6ZSB3 139 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 TMED4Q7Z7H5 227 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 SGPP2Q8IWX5 399 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 OR1L6Q8NGR2 347 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 RRNAD1Q96FB5 475 aaKnown RBP6.49□□□□□ -1.37
SMG6-216ENST00000575176 MISP3Q96FF7 219 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 CITED4Q96RK1 184 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 THYN1Q9P016 225 aa6.49□□□□□ -1.37
SMG6-216ENST00000575176 C15orf62A8K5M9 175 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 ATG12O94817 140 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 LY86O95711 162 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 IGLC1P0CG04 106 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 SULT1A3P0DMM9 295 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 SULT1A4P0DMN0 295 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 HOXA1P49639 335 aaPredicted RBP6.48□□□□□ -1.37
SMG6-216ENST00000575176 UBE2MP61081 183 aaKnown RBP6.48□□□□□ -1.37
SMG6-216ENST00000575176 CD69Q07108 199 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 DHRS2Q13268 280 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 DCTN2Q13561 401 aaKnown RBP6.48□□□□□ -1.37
SMG6-216ENST00000575176 SMCO1Q147U7 214 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 ODF3L2Q3SX64 289 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 FAM90A2PQ658T7 463 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 PRSS54Q6PEW0 395 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 PLET1Q6UQ28 207 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 CENPSQ8N2Z9 138 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 LILRB2Q8N423 598 aa6.48□□□□□ -1.37
SMG6-216ENST00000575176 UXS1Q8NBZ7 420 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms