RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 OR10C1Q96KK4 312 aa12.53□□□□□ -0.4
PFN1-203ENST00000574872 CCDC140Q96MF4 163 aa12.53□□□□□ -0.4
PFN1-203ENST00000574872 MAGT1Q9H0U3 335 aa12.53□□□□□ -0.4
PFN1-203ENST00000574872 GPN1Q9HCN4 374 aaPredicted RBP12.53□□□□□ -0.4
PFN1-203ENST00000574872 RANGRFQ9HD47 186 aaPredicted RBP12.53□□□□□ -0.4
PFN1-203ENST00000574872 CACFD1Q9UGQ2 172 aa12.53□□□□□ -0.4
PFN1-203ENST00000574872 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.52□□□□□ -0.41
PFN1-203ENST00000574872 PPP5D1E7EU14 171 aa12.52□□□□□ -0.41
PFN1-203ENST00000574872 K7EIM0 57 aa12.52□□□□□ -0.41
PFN1-203ENST00000574872 IGHV3-48P01763 117 aa12.52□□□□□ -0.41
PFN1-203ENST00000574872 IAPPP10997 89 aa12.52□□□□□ -0.41
PFN1-203ENST00000574872 IAH1Q2TAA2 248 aaPredicted RBP12.52□□□□□ -0.41
PFN1-203ENST00000574872 CXorf58Q96LI9 332 aa12.52□□□□□ -0.41
PFN1-203ENST00000574872 HIPK2Q9H2X6 1198 aa12.52□□□□□ -0.41
PFN1-203ENST00000574872 ZC4H2Q9NQZ6 224 aa12.52□□□□□ -0.41
PFN1-203ENST00000574872 GSKIPQ9P0R6 139 aa12.52□□□□□ -0.41
PFN1-203ENST00000574872 PRAF2O60831 178 aa12.51□□□□□ -0.41
PFN1-203ENST00000574872 SCGB1D2O95969 90 aa12.51□□□□□ -0.41
PFN1-203ENST00000574872 HOXD3P31249 432 aaPredicted RBP12.51□□□□□ -0.41
PFN1-203ENST00000574872 GPR183P32249 361 aa12.51□□□□□ -0.41
PFN1-203ENST00000574872 SUB1P53999 127 aaKnown RBP eCLIP12.51□□□□□ -0.411e-9■■■■■ 44.8
PFN1-203ENST00000574872 SLC24A4Q8NFF2 622 aa12.51□□□□□ -0.41
PFN1-203ENST00000574872 ZNF502Q8TBZ5 544 aa12.51□□□□□ -0.41
PFN1-203ENST00000574872 DCUN1D4Q92564 292 aa12.51□□□□□ -0.41
PFN1-203ENST00000574872 C5orf51A6NDU8 294 aa12.5□□□□□ -0.41
PFN1-203ENST00000574872 FAM90A26D6RGX4 464 aa12.5□□□□□ -0.41
PFN1-203ENST00000574872 BMPR1BO00238 502 aa12.5□□□□□ -0.41
PFN1-203ENST00000574872 MT-CO2P00403 227 aa12.5□□□□□ -0.41
PFN1-203ENST00000574872 IGLL1P15814 213 aa12.5□□□□□ -0.41
PFN1-203ENST00000574872 HTR2BP41595 481 aa12.5□□□□□ -0.41
PFN1-203ENST00000574872 BSXQ3C1V8 233 aa12.5□□□□□ -0.41
PFN1-203ENST00000574872 ZBTB8BQ8NAP8 495 aaPredicted RBP12.5□□□□□ -0.41
PFN1-203ENST00000574872 UBAC2Q8NBM4 344 aa12.5□□□□□ -0.41
PFN1-203ENST00000574872 WFDC9Q8NEX5 89 aa12.5□□□□□ -0.41
PFN1-203ENST00000574872 OR4D5Q8NGN0 318 aa12.5□□□□□ -0.41
PFN1-203ENST00000574872 VN1R17PQ8TDU5 208 aa12.5□□□□□ -0.41
PFN1-203ENST00000574872 SCARB1Q8WTV0 552 aa12.5□□□□□ -0.41
PFN1-203ENST00000574872 DLX4Q92988 240 aaPredicted RBP12.5□□□□□ -0.41
PFN1-203ENST00000574872 C21orf62Q9NYP8 219 aa12.5□□□□□ -0.41
PFN1-203ENST00000574872 TRBV7-1A0A0A6YYK4 115 aa12.49□□□□□ -0.41
PFN1-203ENST00000574872 SNRPGP15A8MWD9 76 aa12.49□□□□□ -0.41
PFN1-203ENST00000574872 I3L2K1 104 aa12.49□□□□□ -0.41
PFN1-203ENST00000574872 WRBO00258 174 aa12.49□□□□□ -0.41
PFN1-203ENST00000574872 MED6O75586 246 aa12.49□□□□□ -0.41
PFN1-203ENST00000574872 IFNA10P01566 189 aa12.49□□□□□ -0.41
PFN1-203ENST00000574872 CLEC3BP05452 202 aa12.49□□□□□ -0.41
PFN1-203ENST00000574872 ZP3P21754 424 aa12.49□□□□□ -0.41
PFN1-203ENST00000574872 NPY1RP25929 384 aa12.49□□□□□ -0.41
PFN1-203ENST00000574872 ARL3P36405 182 aa12.49□□□□□ -0.41
PFN1-203ENST00000574872 NKX2-1P43699 371 aaPredicted RBP12.49□□□□□ -0.41
PFN1-203ENST00000574872 POLR2GP62487 172 aaKnown RBP eCLIP12.49□□□□□ -0.41
PFN1-203ENST00000574872 RPEL1Q2QD12 228 aa12.49□□□□□ -0.41
PFN1-203ENST00000574872 Q56UQ5 140 aa12.49□□□□□ -0.41
PFN1-203ENST00000574872 C1QL4Q86Z23 238 aa12.49□□□□□ -0.41
PFN1-203ENST00000574872 TMEM170AQ8WVE7 144 aa12.49□□□□□ -0.41
PFN1-203ENST00000574872 NBEAL1Q6ZS30 2694 aa12.49□□□□□ -0.41
PFN1-203ENST00000574872 OR2T8A6NH00 312 aa12.48□□□□□ -0.41
PFN1-203ENST00000574872 GOSR2O14653 212 aa12.48□□□□□ -0.41
PFN1-203ENST00000574872 SYNGR2O43760 224 aa12.48□□□□□ -0.41
PFN1-203ENST00000574872 SSSCA1O60232 199 aa12.48□□□□□ -0.41
PFN1-203ENST00000574872 OPRK1P41145 380 aa12.48□□□□□ -0.41
PFN1-203ENST00000574872 SYNJ2BPP57105 145 aa12.48□□□□□ -0.41
PFN1-203ENST00000574872 TATDN3Q17R31 274 aa12.48□□□□□ -0.41
PFN1-203ENST00000574872 RGS21Q2M5E4 152 aa12.48□□□□□ -0.41
PFN1-203ENST00000574872 C2orf83Q53S99 150 aa12.48□□□□□ -0.41
PFN1-203ENST00000574872 OXLD1Q5BKU9 147 aa12.48□□□□□ -0.41
PFN1-203ENST00000574872 PVRIGQ6DKI7 326 aa12.48□□□□□ -0.41
PFN1-203ENST00000574872 PAIP2BQ9ULR5 123 aaKnown RBP12.48□□□□□ -0.41
PFN1-203ENST00000574872 G3V4G9 280 aa12.47□□□□□ -0.41
PFN1-203ENST00000574872 OVOL1O14753 267 aa12.47□□□□□ -0.41
PFN1-203ENST00000574872 SSNA1O43805 119 aa12.47□□□□□ -0.41
PFN1-203ENST00000574872 GGCTO75223 188 aaKnown RBP12.47□□□□□ -0.41
PFN1-203ENST00000574872 OR2C1O95371 312 aa12.47□□□□□ -0.41
PFN1-203ENST00000574872 ID3Q02535 119 aa12.47□□□□□ -0.41
PFN1-203ENST00000574872 MLANAQ16655 118 aa12.47□□□□□ -0.41
PFN1-203ENST00000574872 FAM209BQ5JX69 171 aa12.47□□□□□ -0.41
PFN1-203ENST00000574872 GSG1LQ6UXU4 331 aa12.47□□□□□ -0.41
PFN1-203ENST00000574872 RCC1LQ96I51 464 aaKnown RBP12.47□□□□□ -0.41
PFN1-203ENST00000574872 FNDC4Q9H6D8 234 aaPredicted RBP12.47□□□□□ -0.41
PFN1-203ENST00000574872 U3KQ87 197 aa12.47□□□□□ -0.41
PFN1-203ENST00000574872 IGHV3-35A0A0C4DH35 117 aa12.46□□□□□ -0.41
PFN1-203ENST00000574872 SEC14L6B5MCN3 397 aa12.46□□□□□ -0.41
PFN1-203ENST00000574872 F8W735 103 aaPredicted RBP12.46□□□□□ -0.41
PFN1-203ENST00000574872 H3BP45 60 aa12.46□□□□□ -0.41
PFN1-203ENST00000574872 CORTO00230 105 aa12.46□□□□□ -0.41
PFN1-203ENST00000574872 TGOLN2O43493 480 aa12.46□□□□□ -0.41
PFN1-203ENST00000574872 SIX6O95475 246 aa12.46□□□□□ -0.41
PFN1-203ENST00000574872 ACSM6Q6P461 480 aa12.46□□□□□ -0.41
PFN1-203ENST00000574872 CIB3Q96Q77 187 aaPredicted RBP12.46□□□□□ -0.41
PFN1-203ENST00000574872 ALG5Q9Y673 324 aa12.46□□□□□ -0.41
PFN1-203ENST00000574872 NOTCH1P46531 2555 aa12.46□□□□□ -0.42
PFN1-203ENST00000574872 C15orf62A8K5M9 175 aa12.45□□□□□ -0.42
PFN1-203ENST00000574872 MBPP02686 304 aaPredicted RBP12.45□□□□□ -0.42
PFN1-203ENST00000574872 IFNA4P05014 189 aa12.45□□□□□ -0.42
PFN1-203ENST00000574872 MFAP4P55083 255 aa12.45□□□□□ -0.42
PFN1-203ENST00000574872 KLF5Q13887 457 aaPredicted RBP12.45□□□□□ -0.42
PFN1-203ENST00000574872 C2orf50Q96LR7 162 aa12.45□□□□□ -0.42
PFN1-203ENST00000574872 OR4C12Q96R67 309 aa12.45□□□□□ -0.42
PFN1-203ENST00000574872 CHRDL1Q9BU40 450 aa12.45□□□□□ -0.42
PFN1-203ENST00000574872 MRPL36Q9P0J6 103 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms