RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 U3KQA8 63 aa11.82□□□□□ -0.52
SMG6-215ENST00000574501 CEP192Q8TEP8 1941 aa11.82□□□□□ -0.52
SMG6-215ENST00000574501 HIGD1CA8MV81 97 aa11.81□□□□□ -0.52
SMG6-215ENST00000574501 VWC2LB2RUY7 222 aa11.81□□□□□ -0.52
SMG6-215ENST00000574501 CER1O95813 267 aa11.81□□□□□ -0.52
SMG6-215ENST00000574501 CCL4P13236 92 aa11.81□□□□□ -0.52
SMG6-215ENST00000574501 C12orf54Q6X4T0 127 aa11.81□□□□□ -0.52
SMG6-215ENST00000574501 SMRP1Q8NCR6 262 aa11.81□□□□□ -0.52
SMG6-215ENST00000574501 COMMD5Q9GZQ3 224 aa11.81□□□□□ -0.52
SMG6-215ENST00000574501 IGKV1OR2-108A0A075B7D4 117 aa11.81□□□□□ -0.52
SMG6-215ENST00000574501 TRAV5A0A0B4J249 113 aa11.81□□□□□ -0.52
SMG6-215ENST00000574501 SNAI2O43623 268 aa11.81□□□□□ -0.52
SMG6-215ENST00000574501 GUCD1Q96NT3 240 aa11.81□□□□□ -0.52
SMG6-215ENST00000574501 PMCHL2Q9BQD1 86 aa11.81□□□□□ -0.52
SMG6-215ENST00000574501 GNG12Q9UBI6 72 aa11.81□□□□□ -0.52
SMG6-215ENST00000574501 DUSP13Q9UII6 198 aa11.81□□□□□ -0.52
SMG6-215ENST00000574501 IGHV1-24A0A0C4DH33 117 aa11.8□□□□□ -0.52
SMG6-215ENST00000574501 GABRA6Q16445 453 aa11.8□□□□□ -0.52
SMG6-215ENST00000574501 FAM71F2Q6NXP2 309 aa11.8□□□□□ -0.52
SMG6-215ENST00000574501 MBD6Q96DN6 1003 aa11.8□□□□□ -0.52
SMG6-215ENST00000574501 OBP2BQ9NPH6 170 aa11.8□□□□□ -0.52
SMG6-215ENST00000574501 LOXL2Q9Y4K0 774 aa11.8□□□□□ -0.52
SMG6-215ENST00000574501 TIMM8BQ9Y5J9 83 aaPredicted RBP11.8□□□□□ -0.52
SMG6-215ENST00000574501 DSPP15924 2871 aaKnown RBP11.8□□□□□ -0.52
SMG6-215ENST00000574501 MLANAQ16655 118 aa11.8□□□□□ -0.52
SMG6-215ENST00000574501 MORN5Q5VZ52 161 aa11.8□□□□□ -0.52
SMG6-215ENST00000574501 RASL11AQ6T310 242 aa11.8□□□□□ -0.52
SMG6-215ENST00000574501 OR2V2Q96R30 315 aa11.8□□□□□ -0.52
SMG6-215ENST00000574501 SCRT2Q9NQ03 307 aa11.8□□□□□ -0.52
SMG6-215ENST00000574501 FAM90A9PA6NNJ1 464 aa11.79□□□□□ -0.52
SMG6-215ENST00000574501 HSBP1L1C9JCN9 74 aa11.79□□□□□ -0.52
SMG6-215ENST00000574501 CRXO43186 299 aaPredicted RBP11.79□□□□□ -0.52
SMG6-215ENST00000574501 SPINT2O43291 252 aa11.79□□□□□ -0.52
SMG6-215ENST00000574501 CD5LO43866 347 aa11.79□□□□□ -0.52
SMG6-215ENST00000574501 LEPROTL1O95214 131 aa11.79□□□□□ -0.52
SMG6-215ENST00000574501 CYC1P08574 325 aa11.79□□□□□ -0.52
SMG6-215ENST00000574501 SMIM12Q96EX1 92 aa11.79□□□□□ -0.52
SMG6-215ENST00000574501 GRAMD2BQ96HH9 432 aa11.79□□□□□ -0.52
SMG6-215ENST00000574501 SGK494Q96LW2 274 aa11.79□□□□□ -0.52
SMG6-215ENST00000574501 S1PR3Q99500 378 aa11.79□□□□□ -0.52
SMG6-215ENST00000574501 ENY2Q9NPA8 101 aa11.79□□□□□ -0.52
SMG6-215ENST00000574501 URB1O60287 2271 aaKnown RBP11.79□□□□□ -0.52
SMG6-215ENST00000574501 ZNF134P52741 427 aa11.79□□□□□ -0.52
SMG6-215ENST00000574501 C1orf229Q6ZS94 237 aaPredicted RBP11.79□□□□□ -0.52
SMG6-215ENST00000574501 SSX8Q7RTT4 187 aa11.79□□□□□ -0.52
SMG6-215ENST00000574501 SLC25A40Q8TBP6 338 aa11.79□□□□□ -0.52
SMG6-215ENST00000574501 NCOR1P1Q9H4R4 102 aa11.79□□□□□ -0.52
SMG6-215ENST00000574501 TRGV8A0A0C4DH27 118 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 C15orf65H3BRN8 121 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 OR2J3O76001 311 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 IGLC1P0CG04 106 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 FOLR3P41439 243 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 CYB561P49447 251 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 ZNF138P52744 262 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 TCF24Q7RTU0 167 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 HES7Q9BYE0 225 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 FNDC4Q9H6D8 234 aaPredicted RBP11.78□□□□□ -0.52
SMG6-215ENST00000574501 PEF1Q9UBV8 284 aaKnown RBP11.78□□□□□ -0.52
SMG6-215ENST00000574501 CACNA1EQ15878 2313 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 ZFHX4Q86UP3 3567 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 A0A1W2PRE2 83 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 C7orf71A4D174 169 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 C15orf61A6NNL5 157 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 PPIAL4DF5H284 164 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 SMPD2O60906 423 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 PLGLB1Q02325 96 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 UTF1Q5T230 341 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 ACP7Q6ZNF0 438 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 C11orf53Q8IXP5 236 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 LEAP2Q969E1 77 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 ZNF835Q9Y2P0 537 aa11.78□□□□□ -0.52
SMG6-215ENST00000574501 GAGE10A6NGK3 116 aa11.77□□□□□ -0.52
SMG6-215ENST00000574501 TAS2R45P59539 299 aa11.77□□□□□ -0.52
SMG6-215ENST00000574501 UBE2L3P68036 154 aaKnown RBP11.77□□□□□ -0.52
SMG6-215ENST00000574501 TBC1D28Q2M2D7 210 aa11.77□□□□□ -0.52
SMG6-215ENST00000574501 CHRDL1Q9BU40 450 aa11.77□□□□□ -0.52
SMG6-215ENST00000574501 TMEM191AQ9H0A3 160 aa11.77□□□□□ -0.52
SMG6-215ENST00000574501 AMMECR1Q9Y4X0 333 aaPredicted RBP11.77□□□□□ -0.52
SMG6-215ENST00000574501 KNTC1P50748 2209 aa11.77□□□□□ -0.53
SMG6-215ENST00000574501 FAM231BA6NCW3 169 aa11.77□□□□□ -0.53
SMG6-215ENST00000574501 PYYP10082 97 aa11.77□□□□□ -0.53
SMG6-215ENST00000574501 MPV17P39210 176 aa11.77□□□□□ -0.53
SMG6-215ENST00000574501 UQCRFS1P47985 274 aa11.77□□□□□ -0.53
SMG6-215ENST00000574501 OR9G1Q8NH87 305 aa11.77□□□□□ -0.53
SMG6-215ENST00000574501 SLC25A33Q9BSK2 321 aa11.77□□□□□ -0.53
SMG6-215ENST00000574501 PI4KAP42356 2102 aa11.76□□□□□ -0.53
SMG6-215ENST00000574501 ADH4P08319 380 aa11.76□□□□□ -0.53
SMG6-215ENST00000574501 C8orf88P0DMB2 117 aa11.76□□□□□ -0.53
SMG6-215ENST00000574501 GPR183P32249 361 aa11.76□□□□□ -0.53
SMG6-215ENST00000574501 HSPE1P61604 102 aaKnown RBP11.76□□□□□ -0.53
SMG6-215ENST00000574501 IL11RAQ14626 422 aa11.76□□□□□ -0.53
SMG6-215ENST00000574501 FER1L6-AS1Q8NA97 138 aa11.76□□□□□ -0.53
SMG6-215ENST00000574501 NAA38Q9BRA0 125 aaKnown RBP11.76□□□□□ -0.53
SMG6-215ENST00000574501 IDI2-AS1Q9NZ38 188 aa11.76□□□□□ -0.53
SMG6-215ENST00000574501 TNCP24821 2201 aa11.76□□□□□ -0.53
SMG6-215ENST00000574501 J3QR06 171 aa11.76□□□□□ -0.53
SMG6-215ENST00000574501 APOA2P02652 100 aa11.76□□□□□ -0.53
SMG6-215ENST00000574501 MAGEA5P43359 124 aa11.76□□□□□ -0.53
SMG6-215ENST00000574501 ZNF137PP52743 207 aa11.76□□□□□ -0.53
SMG6-215ENST00000574501 HIST1H1AQ02539 215 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms