RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 MORN3Q6PF18 240 aaPredicted RBP12.62□□□□□ -0.39
CCDC40-211ENST00000574099 TOMM20LQ6UXN7 152 aa12.62□□□□□ -0.39
CCDC40-211ENST00000574099 PRSS48Q7RTY5 328 aa12.62□□□□□ -0.39
CCDC40-211ENST00000574099 NDUFB11Q9NX14 153 aa12.62□□□□□ -0.39
CCDC40-211ENST00000574099 DAPK2Q9UIK4 370 aa12.62□□□□□ -0.39
CCDC40-211ENST00000574099 TBC1D24Q9ULP9 559 aa12.62□□□□□ -0.39
CCDC40-211ENST00000574099 TRDV1A0A1B0GX56 115 aa12.61□□□□□ -0.39
CCDC40-211ENST00000574099 IFNA10P01566 189 aa12.61□□□□□ -0.39
CCDC40-211ENST00000574099 ZNF688P0C7X2 276 aa12.61□□□□□ -0.39
CCDC40-211ENST00000574099 LPAR6P43657 344 aa12.61□□□□□ -0.39
CCDC40-211ENST00000574099 TMEM41BQ5BJD5 291 aa12.61□□□□□ -0.39
CCDC40-211ENST00000574099 UBE2UQ5VVX9 321 aa12.61□□□□□ -0.39
CCDC40-211ENST00000574099 ZNF367Q7RTV3 350 aa12.61□□□□□ -0.39
CCDC40-211ENST00000574099 HOGA1Q86XE5 327 aa12.61□□□□□ -0.39
CCDC40-211ENST00000574099 UBE2DNLQ8IWF7 75 aa12.61□□□□□ -0.39
CCDC40-211ENST00000574099 STXBP6Q8NFX7 210 aa12.61□□□□□ -0.39
CCDC40-211ENST00000574099 FCAMRQ8WWV6 532 aa12.61□□□□□ -0.39
CCDC40-211ENST00000574099 TXN2Q99757 166 aa12.61□□□□□ -0.39
CCDC40-211ENST00000574099 TRAV18A0A075B6X5 111 aa12.6□□□□□ -0.39
CCDC40-211ENST00000574099 TRAV2A0A0B4J234 112 aa12.6□□□□□ -0.39
CCDC40-211ENST00000574099 NOTOA8MTQ0 251 aa12.6□□□□□ -0.39
CCDC40-211ENST00000574099 F2RP25116 425 aa12.6□□□□□ -0.39
CCDC40-211ENST00000574099 HERV-K104P61576 105 aa12.6□□□□□ -0.39
CCDC40-211ENST00000574099 ACTL10Q5JWF8 245 aa12.6□□□□□ -0.39
CCDC40-211ENST00000574099 DUSP18Q8NEJ0 188 aa12.6□□□□□ -0.39
CCDC40-211ENST00000574099 TSPAN14Q8NG11 270 aa12.6□□□□□ -0.39
CCDC40-211ENST00000574099 TMEM14BQ9NUH8 114 aa12.6□□□□□ -0.39
CCDC40-211ENST00000574099 RHBDL2Q9NX52 303 aa12.6□□□□□ -0.39
CCDC40-211ENST00000574099 PRNDQ9UKY0 176 aa12.6□□□□□ -0.39
CCDC40-211ENST00000574099 PUS1Q9Y606 427 aaKnown RBP eCLIP12.6□□□□□ -0.39
CCDC40-211ENST00000574099 GNRHRP30968 328 aa12.59□□□□□ -0.39
CCDC40-211ENST00000574099 TBCEQ15813 527 aaPredicted RBP12.59□□□□□ -0.39
CCDC40-211ENST00000574099 TPRA1Q86W33 373 aa12.59□□□□□ -0.39
CCDC40-211ENST00000574099 ZFAND3Q9H8U3 227 aa12.59□□□□□ -0.39
CCDC40-211ENST00000574099 MEIS3P1A6NDR6 274 aa12.58□□□□□ -0.4
CCDC40-211ENST00000574099 K7EQG2 157 aa12.58□□□□□ -0.4
CCDC40-211ENST00000574099 PGLYRP1O75594 196 aaPredicted RBP12.58□□□□□ -0.4
CCDC40-211ENST00000574099 AQP4P55087 323 aa12.58□□□□□ -0.4
CCDC40-211ENST00000574099 Q6ZRM9 215 aa12.58□□□□□ -0.4
CCDC40-211ENST00000574099 CSNK1G2-AS1Q8NCQ2 148 aa12.58□□□□□ -0.4
CCDC40-211ENST00000574099 MOB3AQ96BX8 217 aa12.58□□□□□ -0.4
CCDC40-211ENST00000574099 RRP15Q9Y3B9 282 aaKnown RBP12.58□□□□□ -0.4
CCDC40-211ENST00000574099 IFNA21P01568 189 aa12.57□□□□□ -0.4
CCDC40-211ENST00000574099 IFNA17P01571 189 aa12.57□□□□□ -0.4
CCDC40-211ENST00000574099 ZNF600Q6ZNG1 722 aa12.57□□□□□ -0.4
CCDC40-211ENST00000574099 Q6ZR54 194 aa12.57□□□□□ -0.4
CCDC40-211ENST00000574099 MAPKAPK5-AS1Q8N8E1 139 aa12.57□□□□□ -0.4
CCDC40-211ENST00000574099 OR5AP2Q8NGF4 316 aa12.57□□□□□ -0.4
CCDC40-211ENST00000574099 TMEM231Q9H6L2 316 aa12.57□□□□□ -0.4
CCDC40-211ENST00000574099 FKBP11Q9NYL4 201 aa12.57□□□□□ -0.4
CCDC40-211ENST00000574099 EHFQ9NZC4 300 aa12.57□□□□□ -0.4
CCDC40-211ENST00000574099 A0A1B0GU03 582 aa12.56□□□□□ -0.4
CCDC40-211ENST00000574099 EBAG9O00559 213 aa12.56□□□□□ -0.4
CCDC40-211ENST00000574099 SOHLH1Q5JUK2 328 aa12.56□□□□□ -0.4
CCDC40-211ENST00000574099 SFXN4Q6P4A7 337 aa12.56□□□□□ -0.4
CCDC40-211ENST00000574099 OR5H6Q8NGV6 325 aa12.56□□□□□ -0.4
CCDC40-211ENST00000574099 BORCS5Q969J3 196 aa12.56□□□□□ -0.4
CCDC40-211ENST00000574099 SLC25A38Q96DW6 304 aa12.56□□□□□ -0.4
CCDC40-211ENST00000574099 GRAMD2BQ96HH9 432 aa12.56□□□□□ -0.4
CCDC40-211ENST00000574099 CD74P04233 296 aa12.55□□□□□ -0.4
CCDC40-211ENST00000574099 NPY1RP25929 384 aa12.55□□□□□ -0.4
CCDC40-211ENST00000574099 SPINK9Q5DT21 86 aa12.55□□□□□ -0.4
CCDC40-211ENST00000574099 ZNF114Q8NC26 417 aa12.55□□□□□ -0.4
CCDC40-211ENST00000574099 TSC22D3Q99576 134 aa12.55□□□□□ -0.4
CCDC40-211ENST00000574099 ZNF2Q9BSG1 426 aaPredicted RBP12.55□□□□□ -0.4
CCDC40-211ENST00000574099 TXNL4BQ9NX01 149 aaKnown RBP12.55□□□□□ -0.4
CCDC40-211ENST00000574099 C16orf90A8MZG2 172 aa12.54□□□□□ -0.4
CCDC40-211ENST00000574099 NPPCP23582 126 aa12.54□□□□□ -0.4
CCDC40-211ENST00000574099 P2RY1P47900 373 aa12.54□□□□□ -0.4
CCDC40-211ENST00000574099 NPBWR1P48145 328 aa12.54□□□□□ -0.4
CCDC40-211ENST00000574099 EMP1P54849 157 aa12.54□□□□□ -0.4
CCDC40-211ENST00000574099 FXYD6Q9H0Q3 95 aa12.54□□□□□ -0.4
CCDC40-211ENST00000574099 XCL2Q9UBD3 114 aa12.54□□□□□ -0.4
CCDC40-211ENST00000574099 NACAE9PAV3 2078 aa12.53□□□□□ -0.4
CCDC40-211ENST00000574099 A0A1W2PS18 150 aa12.53□□□□□ -0.4
CCDC40-211ENST00000574099 PPP5CP53041 499 aa12.53□□□□□ -0.4
CCDC40-211ENST00000574099 PRCDQ00LT1 54 aa12.53□□□□□ -0.4
CCDC40-211ENST00000574099 PSMG4Q5JS54 123 aa12.53□□□□□ -0.4
CCDC40-211ENST00000574099 C1orf134Q5TEV5 83 aa12.53□□□□□ -0.4
CCDC40-211ENST00000574099 CADM3Q8N126 398 aa12.53□□□□□ -0.4
CCDC40-211ENST00000574099 OR4A16Q8NH70 328 aa12.53□□□□□ -0.4
CCDC40-211ENST00000574099 DCANP1Q8TF63 244 aa12.53□□□□□ -0.4
CCDC40-211ENST00000574099 METTL26Q96S19 204 aa12.53□□□□□ -0.4
CCDC40-211ENST00000574099 AUNIPQ9H7T9 357 aa12.53□□□□□ -0.4
CCDC40-211ENST00000574099 IFT46Q9NQC8 304 aa12.53□□□□□ -0.4
CCDC40-211ENST00000574099 TMEM50AO95807 157 aa12.52□□□□□ -0.41
CCDC40-211ENST00000574099 RFX2P48378 723 aa12.52□□□□□ -0.41
CCDC40-211ENST00000574099 MXD1Q05195 221 aa12.52□□□□□ -0.41
CCDC40-211ENST00000574099 PHLDA2Q53GA4 152 aa12.52□□□□□ -0.41
CCDC40-211ENST00000574099 CMTM1Q8IZ96 169 aa12.52□□□□□ -0.41
CCDC40-211ENST00000574099 RAB40CQ96S21 281 aa12.52□□□□□ -0.41
CCDC40-211ENST00000574099 PMP2P02689 132 aa12.51□□□□□ -0.41
CCDC40-211ENST00000574099 CLEC2LP0C7M8 214 aa12.51□□□□□ -0.41
CCDC40-211ENST00000574099 ERHP84090 104 aaKnown RBP12.51□□□□□ -0.41
CCDC40-211ENST00000574099 DHRS2Q13268 280 aa12.51□□□□□ -0.41
CCDC40-211ENST00000574099 H2BFWTQ7Z2G1 175 aa12.51□□□□□ -0.41
CCDC40-211ENST00000574099 HELTA6NFD8 242 aa12.5□□□□□ -0.41
CCDC40-211ENST00000574099 GPR31O00270 319 aa12.5□□□□□ -0.41
CCDC40-211ENST00000574099 CDK2AP2O75956 126 aa12.5□□□□□ -0.41
CCDC40-211ENST00000574099 HTN3P15516 51 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms