RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 GALNT14Q96FL9 552 aa15.65■□□□□ 0.1
CHRNB1-206ENST00000574054 ZNF414Q96IQ9 312 aa15.65■□□□□ 0.1
CHRNB1-206ENST00000574054 NXF2Q9GZY0 626 aaKnown RBP15.65■□□□□ 0.1
CHRNB1-206ENST00000574054 KLK11Q9UBX7 282 aa15.65■□□□□ 0.1
CHRNB1-206ENST00000574054 KIR2DL5BA0A0G2JN68 375 aa15.64■□□□□ 0.09
CHRNB1-206ENST00000574054 KIR2DL5BA0A0G2JPC4 375 aa15.64■□□□□ 0.09
CHRNB1-206ENST00000574054 CD3DP04234 171 aa15.64■□□□□ 0.09
CHRNB1-206ENST00000574054 FCGR2BP31994 310 aaPredicted RBP15.64■□□□□ 0.09
CHRNB1-206ENST00000574054 AKR1C2P52895 323 aa15.64■□□□□ 0.09
CHRNB1-206ENST00000574054 PPP5CP53041 499 aa15.64■□□□□ 0.09
CHRNB1-206ENST00000574054 RND3P61587 244 aa15.64■□□□□ 0.09
CHRNB1-206ENST00000574054 KIR2DL5AQ8N109 375 aa15.64■□□□□ 0.09
CHRNB1-206ENST00000574054 SLC35G3Q8N808 338 aa15.64■□□□□ 0.09
CHRNB1-206ENST00000574054 OR52I2Q8NH67 350 aa15.64■□□□□ 0.09
CHRNB1-206ENST00000574054 KIR2DL5BQ8NHK3 375 aa15.64■□□□□ 0.09
CHRNB1-206ENST00000574054 AP3S1Q92572 193 aa15.64■□□□□ 0.09
CHRNB1-206ENST00000574054 ZNF486Q96H40 463 aaPredicted RBP15.64■□□□□ 0.09
CHRNB1-206ENST00000574054 OR10C1Q96KK4 312 aa15.64■□□□□ 0.09
CHRNB1-206ENST00000574054 C6orf62Q9GZU0 229 aaPredicted RBP15.64■□□□□ 0.09
CHRNB1-206ENST00000574054 NAA50Q9GZZ1 169 aaKnown RBP15.64■□□□□ 0.09
CHRNB1-206ENST00000574054 TRAV14DV4A0A0A6YYC5 116 aa15.63■□□□□ 0.09
CHRNB1-206ENST00000574054 IGKV1-5P01602 117 aa15.63■□□□□ 0.09
CHRNB1-206ENST00000574054 SNCAP37840 140 aa15.63■□□□□ 0.09
CHRNB1-206ENST00000574054 EWSR1Q01844 656 aaKnown RBP eCLIP15.63■□□□□ 0.09
CHRNB1-206ENST00000574054 TNFRSF9Q07011 255 aa15.63■□□□□ 0.09
CHRNB1-206ENST00000574054 GBGT1Q8N5D6 347 aa15.63■□□□□ 0.09
CHRNB1-206ENST00000574054 RNF183Q96D59 192 aa15.63■□□□□ 0.09
CHRNB1-206ENST00000574054 TP53RKQ96S44 253 aa15.63■□□□□ 0.09
CHRNB1-206ENST00000574054 EXTL2Q9UBQ6 330 aa15.63■□□□□ 0.09
CHRNB1-206ENST00000574054 IFNA17P01571 189 aa15.62■□□□□ 0.09
CHRNB1-206ENST00000574054 NPBWR1P48145 328 aa15.62■□□□□ 0.09
CHRNB1-206ENST00000574054 ZNF124Q15973 351 aa15.62■□□□□ 0.09
CHRNB1-206ENST00000574054 TRIM16LQ309B1 348 aa15.62■□□□□ 0.09
CHRNB1-206ENST00000574054 ARRDC1Q8N5I2 433 aa15.62■□□□□ 0.09
CHRNB1-206ENST00000574054 GINS3Q9BRX5 216 aa15.62■□□□□ 0.09
CHRNB1-206ENST00000574054 C3orf85A0A1B0GTC6 90 aa15.61■□□□□ 0.09
CHRNB1-206ENST00000574054 ST8SIA3O43173 380 aa15.61■□□□□ 0.09
CHRNB1-206ENST00000574054 ATG12O94817 140 aa15.61■□□□□ 0.09
CHRNB1-206ENST00000574054 ZNF182P17025 639 aaPredicted RBP15.61■□□□□ 0.09
CHRNB1-206ENST00000574054 LHFPL1Q86WI0 220 aa15.61■□□□□ 0.09
CHRNB1-206ENST00000574054 DUSP18Q8NEJ0 188 aa15.61■□□□□ 0.09
CHRNB1-206ENST00000574054 PDCD10Q9BUL8 212 aa15.61■□□□□ 0.09
CHRNB1-206ENST00000574054 MAP6D1Q9H9H5 199 aa15.61■□□□□ 0.09
CHRNB1-206ENST00000574054 COPZ2Q9P299 210 aa15.61■□□□□ 0.09
CHRNB1-206ENST00000574054 MTFP1Q9UDX5 166 aa15.61■□□□□ 0.09
CHRNB1-206ENST00000574054 A0A0B4J293 547 aa15.6■□□□□ 0.09
CHRNB1-206ENST00000574054 NUPR2A6NF83 97 aa15.6■□□□□ 0.09
CHRNB1-206ENST00000574054 TBPP20226 339 aa15.6■□□□□ 0.09
CHRNB1-206ENST00000574054 HOXA1P49639 335 aaPredicted RBP15.6■□□□□ 0.09
CHRNB1-206ENST00000574054 CMC4P56277 68 aaPredicted RBP15.6■□□□□ 0.09
CHRNB1-206ENST00000574054 CTF1Q16619 201 aa15.6■□□□□ 0.09
CHRNB1-206ENST00000574054 SP6Q3SY56 376 aa15.6■□□□□ 0.09
CHRNB1-206ENST00000574054 SCGB2B2Q4G0G5 96 aa15.6■□□□□ 0.09
CHRNB1-206ENST00000574054 TOMM20LQ6UXN7 152 aa15.6■□□□□ 0.09
CHRNB1-206ENST00000574054 TCF24Q7RTU0 167 aa15.6■□□□□ 0.09
CHRNB1-206ENST00000574054 OR4D10Q8NGI6 311 aa15.6■□□□□ 0.09
CHRNB1-206ENST00000574054 RNASE11Q8TAA1 199 aaKnown RBP15.6■□□□□ 0.09
CHRNB1-206ENST00000574054 LINC00476Q8WZB0 136 aa15.6■□□□□ 0.09
CHRNB1-206ENST00000574054 GABARAPO95166 117 aa15.59■□□□□ 0.09
CHRNB1-206ENST00000574054 P0C879 139 aa15.59■□□□□ 0.09
CHRNB1-206ENST00000574054 PAFAH1B2P68402 229 aa15.59■□□□□ 0.09
CHRNB1-206ENST00000574054 GPR107Q5VW38 600 aa15.59■□□□□ 0.09
CHRNB1-206ENST00000574054 CCDC71LQ8N9Z2 235 aa15.59■□□□□ 0.09
CHRNB1-206ENST00000574054 OR13C8Q8NGS7 320 aa15.59■□□□□ 0.09
CHRNB1-206ENST00000574054 ZFAND1Q8TCF1 268 aa15.59■□□□□ 0.09
CHRNB1-206ENST00000574054 ST8SIA2Q92186 375 aa15.59■□□□□ 0.09
CHRNB1-206ENST00000574054 ABHD1Q96SE0 405 aa15.59■□□□□ 0.09
CHRNB1-206ENST00000574054 ENY2Q9NPA8 101 aa15.59■□□□□ 0.09
CHRNB1-206ENST00000574054 IGHV3-66A0A0C4DH42 116 aa15.58■□□□□ 0.08
CHRNB1-206ENST00000574054 RAB3DO95716 219 aa15.58■□□□□ 0.08
CHRNB1-206ENST00000574054 LY6G6CO95867 125 aa15.58■□□□□ 0.08
CHRNB1-206ENST00000574054 SMIM18P0DKX4 95 aa15.58■□□□□ 0.08
CHRNB1-206ENST00000574054 ETV6P41212 452 aa15.58■□□□□ 0.08
CHRNB1-206ENST00000574054 SUB1P53999 127 aaKnown RBP eCLIP15.58■□□□□ 0.08
CHRNB1-206ENST00000574054 FAM90A2PQ658T7 463 aa15.58■□□□□ 0.08
CHRNB1-206ENST00000574054 CEMP1Q6PRD7 247 aaPredicted RBP15.58■□□□□ 0.08
CHRNB1-206ENST00000574054 ZNF600Q6ZNG1 722 aa15.58■□□□□ 0.08
CHRNB1-206ENST00000574054 TMEM217Q8N7C4 229 aa15.58■□□□□ 0.08
CHRNB1-206ENST00000574054 TERB2Q8NHR7 220 aa15.58■□□□□ 0.08
CHRNB1-206ENST00000574054 C15orf40Q8WUR7 153 aa15.58■□□□□ 0.08
CHRNB1-206ENST00000574054 RRNAD1Q96FB5 475 aaKnown RBP15.58■□□□□ 0.08
CHRNB1-206ENST00000574054 CSTL1Q9H114 145 aa15.58■□□□□ 0.08
CHRNB1-206ENST00000574054 PUS1Q9Y606 427 aaKnown RBP eCLIP15.58■□□□□ 0.08
CHRNB1-206ENST00000574054 MPTX1A8MV57 137 aa15.57■□□□□ 0.08
CHRNB1-206ENST00000574054 DNASE2O00115 360 aaPredicted RBP15.57■□□□□ 0.08
CHRNB1-206ENST00000574054 APOHP02749 345 aaPredicted RBP15.57■□□□□ 0.08
CHRNB1-206ENST00000574054 TAS2R19P59542 299 aa15.57■□□□□ 0.08
CHRNB1-206ENST00000574054 RPL11P62913 178 aaKnown RBP15.57■□□□□ 0.08
CHRNB1-206ENST00000574054 TMEM229BQ8NBD8 167 aa15.57■□□□□ 0.08
CHRNB1-206ENST00000574054 MARCH1Q8TCQ1 289 aa15.57■□□□□ 0.08
CHRNB1-206ENST00000574054 RGS5O15539 181 aa15.56■□□□□ 0.08
CHRNB1-206ENST00000574054 CD5P06127 495 aa15.56■□□□□ 0.08
CHRNB1-206ENST00000574054 RNASE2P10153 161 aaKnown RBP15.56■□□□□ 0.08
CHRNB1-206ENST00000574054 STEAP1BQ6NZ63 245 aa15.56■□□□□ 0.08
CHRNB1-206ENST00000574054 ZFAND3Q9H8U3 227 aa15.56■□□□□ 0.08
CHRNB1-206ENST00000574054 A0A0G2JRQ6 117 aa15.55■□□□□ 0.08
CHRNB1-206ENST00000574054 INS-IGF2F8WCM5 200 aa15.55■□□□□ 0.08
CHRNB1-206ENST00000574054 CORTO00230 105 aa15.55■□□□□ 0.08
CHRNB1-206ENST00000574054 DFFBO76075 338 aa15.55■□□□□ 0.08
CHRNB1-206ENST00000574054 TMEM50AO95807 157 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms