RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 CROCCP3Q8IVE0 287 aa16.09■□□□□ 0.17
SNF8-216ENST00000573795 LILRB2Q8N423 598 aa16.09■□□□□ 0.17
SNF8-216ENST00000573795 APOHP02749 345 aaPredicted RBP16.08■□□□□ 0.16
SNF8-216ENST00000573795 PRSS3P35030 304 aa16.08■□□□□ 0.16
SNF8-216ENST00000573795 OR11H2Q8NH07 326 aa16.08■□□□□ 0.16
SNF8-216ENST00000573795 GPX8Q8TED1 209 aa16.08■□□□□ 0.16
SNF8-216ENST00000573795 ST8SIA2Q92186 375 aa16.08■□□□□ 0.16
SNF8-216ENST00000573795 DNAH17Q9UFH2 4485 aa16.08■□□□□ 0.16
SNF8-216ENST00000573795 CMC4P56277 68 aaPredicted RBP16.07■□□□□ 0.16
SNF8-216ENST00000573795 TOMM20LQ6UXN7 152 aa16.07■□□□□ 0.16
SNF8-216ENST00000573795 TCF24Q7RTU0 167 aa16.07■□□□□ 0.16
SNF8-216ENST00000573795 MRGPRFQ96AM1 343 aa16.07■□□□□ 0.16
SNF8-216ENST00000573795 VSIRQ9H7M9 311 aa16.07■□□□□ 0.16
SNF8-216ENST00000573795 ZFAND3Q9H8U3 227 aa16.07■□□□□ 0.16
SNF8-216ENST00000573795 PCLOQ9Y6V0 5065 aa16.07■□□□□ 0.16
SNF8-216ENST00000573795 EIF4EP06730 217 aaKnown RBP16.06■□□□□ 0.16
SNF8-216ENST00000573795 PRR20EP86478 221 aa16.06■□□□□ 0.16
SNF8-216ENST00000573795 PRR20CP86479 221 aa16.06■□□□□ 0.16
SNF8-216ENST00000573795 PRR20DP86480 221 aa16.06■□□□□ 0.16
SNF8-216ENST00000573795 PRR20BP86481 221 aa16.06■□□□□ 0.16
SNF8-216ENST00000573795 PRR20AP86496 221 aa16.06■□□□□ 0.16
SNF8-216ENST00000573795 KCTD21Q4G0X4 260 aa16.06■□□□□ 0.16
SNF8-216ENST00000573795 H2BFWTQ7Z2G1 175 aa16.06■□□□□ 0.16
SNF8-216ENST00000573795 FAM24BQ8N5W8 94 aa16.06■□□□□ 0.16
SNF8-216ENST00000573795 OR4A16Q8NH70 328 aa16.06■□□□□ 0.16
SNF8-216ENST00000573795 C11orf45Q8TAV5 145 aa16.06■□□□□ 0.16
SNF8-216ENST00000573795 PINX1Q96BK5 328 aaKnown RBP16.06■□□□□ 0.16
SNF8-216ENST00000573795 FBXL17Q9UF56 701 aa16.06■□□□□ 0.16
SNF8-216ENST00000573795 DEFB4AO15263 64 aa16.05■□□□□ 0.16
SNF8-216ENST00000573795 GNG7O60262 68 aa16.05■□□□□ 0.16
SNF8-216ENST00000573795 HSPE1P61604 102 aaKnown RBP16.05■□□□□ 0.16
SNF8-216ENST00000573795 IZUMO4Q1ZYL8 232 aa16.05■□□□□ 0.16
SNF8-216ENST00000573795 YIPF6Q96EC8 236 aa16.05■□□□□ 0.16
SNF8-216ENST00000573795 CMTM3Q96MX0 182 aa16.05■□□□□ 0.16
SNF8-216ENST00000573795 MS4A6AQ9H2W1 248 aa16.05■□□□□ 0.16
SNF8-216ENST00000573795 CA1P00915 261 aaPredicted RBP16.04■□□□□ 0.16
SNF8-216ENST00000573795 LSM3P62310 102 aaKnown RBP16.04■□□□□ 0.16
SNF8-216ENST00000573795 RBMS2Q15434 407 aaKnown RBP16.04■□□□□ 0.16
SNF8-216ENST00000573795 SPINK9Q5DT21 86 aa16.04■□□□□ 0.16
SNF8-216ENST00000573795 LEMD1Q68G75 181 aa16.04■□□□□ 0.16
SNF8-216ENST00000573795 LPCAT3Q6P1A2 487 aa16.04■□□□□ 0.16
SNF8-216ENST00000573795 MFFQ9GZY8 342 aa16.04■□□□□ 0.16
SNF8-216ENST00000573795 AGRNO00468 2067 aa16.03■□□□□ 0.16
SNF8-216ENST00000573795 IGHV3-66A0A0C4DH42 116 aa16.03■□□□□ 0.16
SNF8-216ENST00000573795 DFFBO76075 338 aa16.03■□□□□ 0.16
SNF8-216ENST00000573795 UCP3P55916 312 aa16.03■□□□□ 0.16
SNF8-216ENST00000573795 DEFB131AP59861 70 aa16.03■□□□□ 0.16
SNF8-216ENST00000573795 TSPAN5P62079 268 aa16.03■□□□□ 0.16
SNF8-216ENST00000573795 PVRIGQ6DKI7 326 aa16.03■□□□□ 0.16
SNF8-216ENST00000573795 GINS3Q9BRX5 216 aa16.03■□□□□ 0.16
SNF8-216ENST00000573795 A0A1B0GU03 582 aa16.02■□□□□ 0.16
SNF8-216ENST00000573795 ST8SIA3O43173 380 aa16.02■□□□□ 0.16
SNF8-216ENST00000573795 IGKV1-5P01602 117 aa16.02■□□□□ 0.16
SNF8-216ENST00000573795 P0C879 139 aa16.02■□□□□ 0.16
SNF8-216ENST00000573795 PAFAH1B2P68402 229 aa16.02■□□□□ 0.16
SNF8-216ENST00000573795 PUS1Q9Y606 427 aaKnown RBP eCLIP16.02■□□□□ 0.16
SNF8-216ENST00000573795 TRAV2A0A0B4J234 112 aa16.01■□□□□ 0.15
SNF8-216ENST00000573795 CD5P06127 495 aa16.01■□□□□ 0.15
SNF8-216ENST00000573795 GIG44P09565 113 aaPredicted RBP16.01■□□□□ 0.15
SNF8-216ENST00000573795 S100GP29377 79 aa16.01■□□□□ 0.15
SNF8-216ENST00000573795 ERHP84090 104 aaKnown RBP16.01■□□□□ 0.15
SNF8-216ENST00000573795 TMEM187Q14656 261 aa16.01■□□□□ 0.15
SNF8-216ENST00000573795 ZNF600Q6ZNG1 722 aa16.01■□□□□ 0.15
SNF8-216ENST00000573795 Q8NAQ8 132 aa16.01■□□□□ 0.15
SNF8-216ENST00000573795 MRPL36Q9P0J6 103 aaKnown RBP16.01■□□□□ 0.15
SNF8-216ENST00000573795 INS-IGF2F8WCM5 200 aa16■□□□□ 0.15
SNF8-216ENST00000573795 IFNA4P05014 189 aa16■□□□□ 0.15
SNF8-216ENST00000573795 NPBWR1P48145 328 aa16■□□□□ 0.15
SNF8-216ENST00000573795 SNX29P2Q8IUI4 249 aa16■□□□□ 0.15
SNF8-216ENST00000573795 C2CD4CQ8TF44 421 aa16■□□□□ 0.15
SNF8-216ENST00000573795 SCPEP1Q9HB40 452 aa16■□□□□ 0.15
SNF8-216ENST00000573795 A0A0B4J293 547 aa15.99■□□□□ 0.15
SNF8-216ENST00000573795 TMEM50AO95807 157 aa15.99■□□□□ 0.15
SNF8-216ENST00000573795 RCVRNP35243 200 aa15.99■□□□□ 0.15
SNF8-216ENST00000573795 RND3P61587 244 aa15.99■□□□□ 0.15
SNF8-216ENST00000573795 DUSP18Q8NEJ0 188 aa15.99■□□□□ 0.15
SNF8-216ENST00000573795 COMMD3Q9UBI1 195 aa15.99■□□□□ 0.15
SNF8-216ENST00000573795 APLNQ9ULZ1 77 aa15.99■□□□□ 0.15
SNF8-216ENST00000573795 DYNC1H1Q14204 4646 aaKnown RBP15.99■□□□□ 0.15
SNF8-216ENST00000573795 PKHD1P08F94 4074 aa15.98■□□□□ 0.15
SNF8-216ENST00000573795 M0QYG6 137 aa15.98■□□□□ 0.15
SNF8-216ENST00000573795 DNASE2O00115 360 aaPredicted RBP15.98■□□□□ 0.15
SNF8-216ENST00000573795 APOA1P02647 267 aa15.98■□□□□ 0.15
SNF8-216ENST00000573795 RNASE2P10153 161 aaKnown RBP15.98■□□□□ 0.15
SNF8-216ENST00000573795 PI3P19957 117 aa15.98■□□□□ 0.15
SNF8-216ENST00000573795 TP53RKQ96S44 253 aa15.98■□□□□ 0.15
SNF8-216ENST00000573795 FNDC4Q9H6D8 234 aaPredicted RBP15.98■□□□□ 0.15
SNF8-216ENST00000573795 RBMY1A1P0DJD3 496 aaKnown RBP15.97■□□□□ 0.15
SNF8-216ENST00000573795 RBMY1CP0DJD4 496 aa15.97■□□□□ 0.15
SNF8-216ENST00000573795 RBMY1FQ15415 496 aaKnown RBP15.97■□□□□ 0.15
SNF8-216ENST00000573795 TRPT1Q86TN4 253 aaKnown RBP15.97■□□□□ 0.15
SNF8-216ENST00000573795 LHFPL1Q86WI0 220 aa15.97■□□□□ 0.15
SNF8-216ENST00000573795 K7EQG2 157 aa15.96■□□□□ 0.15
SNF8-216ENST00000573795 ELK1P19419 428 aa15.96■□□□□ 0.15
SNF8-216ENST00000573795 C4BPBP20851 252 aa15.96■□□□□ 0.15
SNF8-216ENST00000573795 TCTAP57738 103 aa15.96■□□□□ 0.15
SNF8-216ENST00000573795 NCS1P62166 190 aa15.96■□□□□ 0.15
SNF8-216ENST00000573795 RPL11P62913 178 aaKnown RBP15.96■□□□□ 0.15
SNF8-216ENST00000573795 SLC35G3Q8N808 338 aa15.96■□□□□ 0.15
SNF8-216ENST00000573795 RABAC1Q9UI14 185 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms