RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 ZNF114Q8NC26 417 aa7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 OR4D10Q8NGI6 311 aa7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 OR13C8Q8NGS7 320 aa7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 MARCH1Q8TCQ1 289 aa7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 RRNAD1Q96FB5 475 aaKnown RBP7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 TP53RKQ96S44 253 aa7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 ABHD1Q96SE0 405 aa7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 C14orf166Q9Y224 244 aaKnown RBP7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 DISC1C4P0D8 188 aa7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 GABARAPH6UMI1 98 aa7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 I3L2K1 104 aa7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 K7EMT4 169 aa7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 ST8SIA3O43173 380 aa7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 NOL3O60936 208 aaKnown RBP7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 JTBO76095 146 aa7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 IGKV1-5P01602 117 aa7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 CTSDP07339 412 aaPredicted RBP7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 CTSGP08311 255 aa7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 TFPI2P48307 235 aa7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 SUB1P53999 127 aaKnown RBP eCLIP7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 APOC4P55056 127 aa7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 MEF2DQ14814 521 aa7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 SPCS2Q15005 226 aa7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 SP6Q3SY56 376 aa7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 FAAP20Q6NZ36 180 aa7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 CLVS1Q8IUQ0 354 aaPredicted RBP7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 TMEM116Q8NCL8 245 aa7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 TERB2Q8NHR7 220 aa7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 TXN2Q99757 166 aa7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 GINS3Q9BRX5 216 aa7.2□□□□□ -1.26
NPLOC4-212ENST00000573328 IGHV3OR16-13A0A075B7E8 117 aa7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 IGHV3-74A0A0B4J1X5 117 aa7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 IGHV7-4-1A0A0J9YVY3 117 aa7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 TEX13DA0A0J9YY54 714 aaPredicted RBP7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 CTDSP2O14595 271 aa7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 RPL35AP18077 110 aaKnown RBP7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 BMI1P35226 326 aa7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 NPBWR1P48145 328 aa7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 MRPS10P82664 201 aaKnown RBP7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 SSBP1Q04837 148 aaKnown RBP7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 DEFB135Q30KP9 77 aa7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 ODF3L2Q3SX64 289 aa7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 DUSP18Q8NEJ0 188 aa7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 DIRAS2Q96HU8 199 aa7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 RNF2Q99496 336 aa7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 RHPN1-AS1Q9BWJ2 59 aa7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 C6orf62Q9GZU0 229 aaPredicted RBP7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 NXF2Q9GZY0 626 aaKnown RBP7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 MIXL1Q9H2W2 232 aa7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 SMPXQ9UHP9 88 aa7.19□□□□□ -1.26
NPLOC4-212ENST00000573328 DYNC2H1Q8NCM8 4307 aaKnown RBP7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 TRAV14DV4A0A0A6YYC5 116 aa7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 CORTO00230 105 aa7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 CHEK1O14757 476 aa7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 SCGB2A1O75556 95 aa7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 B3GALNT1O75752 331 aa7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 CD74P04233 296 aa7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 OR5AC1P0C628 307 aa7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 AKAIN1P0CW23 69 aa7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 UCP1P25874 307 aa7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 FCGR2BP31994 310 aaPredicted RBP7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 OPRK1P41145 380 aa7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 ETV6P41212 452 aa7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 ALDH3B2P48448 385 aa7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 GBGT1Q8N5D6 347 aa7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 STPG3Q8N7X2 389 aa7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 OR4C16Q8NGL9 310 aa7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 RAB2BQ8WUD1 216 aa7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 SMIM4Q8WVI0 70 aa7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 OVOL2Q9BRP0 275 aa7.18□□□□□ -1.26
NPLOC4-212ENST00000573328 A0A0B4J293 547 aa7.17□□□□□ -1.26
NPLOC4-212ENST00000573328 A0A0G2JRQ6 117 aa7.17□□□□□ -1.26
NPLOC4-212ENST00000573328 SPRY2O43597 315 aa7.17□□□□□ -1.26
NPLOC4-212ENST00000573328 P0C879 139 aa7.17□□□□□ -1.26
NPLOC4-212ENST00000573328 RPL11P62913 178 aaKnown RBP7.17□□□□□ -1.26
NPLOC4-212ENST00000573328 PAFAH1B2P68402 229 aa7.17□□□□□ -1.26
NPLOC4-212ENST00000573328 PMS2P11Q13670 270 aa7.17□□□□□ -1.26
NPLOC4-212ENST00000573328 ZNF600Q6ZNG1 722 aa7.17□□□□□ -1.26
NPLOC4-212ENST00000573328 TCF24Q7RTU0 167 aa7.17□□□□□ -1.26
NPLOC4-212ENST00000573328 WFDC3Q8IUB2 231 aa7.17□□□□□ -1.26
NPLOC4-212ENST00000573328 APRG1Q8IVJ8 170 aa7.17□□□□□ -1.26
NPLOC4-212ENST00000573328 FAM219AQ8IW50 185 aa7.17□□□□□ -1.26
NPLOC4-212ENST00000573328 GALNT14Q96FL9 552 aa7.17□□□□□ -1.26
NPLOC4-212ENST00000573328 OR10C1Q96KK4 312 aa7.17□□□□□ -1.26
NPLOC4-212ENST00000573328 TMEM222Q9H0R3 208 aa7.17□□□□□ -1.26
NPLOC4-212ENST00000573328 NAA60Q9H7X0 242 aa7.17□□□□□ -1.26
NPLOC4-212ENST00000573328 CCDC59Q9P031 241 aaKnown RBP7.17□□□□□ -1.26
NPLOC4-212ENST00000573328 PUS1Q9Y606 427 aaKnown RBP eCLIP7.17□□□□□ -1.26
NPLOC4-212ENST00000573328 IGHV3-66A0A0C4DH42 116 aa7.16□□□□□ -1.26
NPLOC4-212ENST00000573328 A0A0J9YWU9 116 aa7.16□□□□□ -1.26
NPLOC4-212ENST00000573328 CXorf65A6NEN9 183 aa7.16□□□□□ -1.26
NPLOC4-212ENST00000573328 CEBPZOSA8MTT3 80 aa7.16□□□□□ -1.26
NPLOC4-212ENST00000573328 DNASE2O00115 360 aaPredicted RBP7.16□□□□□ -1.26
NPLOC4-212ENST00000573328 UBE2CO00762 179 aa7.16□□□□□ -1.26
NPLOC4-212ENST00000573328 NXPH3O95157 252 aa7.16□□□□□ -1.26
NPLOC4-212ENST00000573328 RNASE2P10153 161 aaKnown RBP7.16□□□□□ -1.26
NPLOC4-212ENST00000573328 DHODHQ02127 395 aa7.16□□□□□ -1.26
NPLOC4-212ENST00000573328 SURF2Q15527 256 aaPredicted RBP7.16□□□□□ -1.26
NPLOC4-212ENST00000573328 TMEM268Q5VZI3 342 aa7.16□□□□□ -1.26
NPLOC4-212ENST00000573328 TOMM20LQ6UXN7 152 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms