RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 WFDC3Q8IUB2 231 aa7.28□□□□□ -1.24
CIITA-207ENST00000571545 FAM219AQ8IW50 185 aa7.28□□□□□ -1.24
CIITA-207ENST00000571545 TMEM217Q8N7C4 229 aa7.28□□□□□ -1.24
CIITA-207ENST00000571545 STPG3Q8N7X2 389 aa7.28□□□□□ -1.24
CIITA-207ENST00000571545 DUSP18Q8NEJ0 188 aa7.28□□□□□ -1.24
CIITA-207ENST00000571545 RNASE11Q8TAA1 199 aaKnown RBP7.28□□□□□ -1.24
CIITA-207ENST00000571545 RRNAD1Q96FB5 475 aaKnown RBP7.28□□□□□ -1.24
CIITA-207ENST00000571545 OR10C1Q96KK4 312 aa7.28□□□□□ -1.24
CIITA-207ENST00000571545 TMEM231Q9H6L2 316 aa7.28□□□□□ -1.24
CIITA-207ENST00000571545 ENY2Q9NPA8 101 aa7.28□□□□□ -1.24
CIITA-207ENST00000571545 EXTL2Q9UBQ6 330 aa7.28□□□□□ -1.24
CIITA-207ENST00000571545 MTFP1Q9UDX5 166 aa7.28□□□□□ -1.24
CIITA-207ENST00000571545 PIGBOS1A0A0B4J2F0 54 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 C3orf85A0A1B0GTC6 90 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 GABARAPH6UMI1 98 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 I3L2K1 104 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 M0QYG6 137 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 RGS5O15539 181 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 YIF1AO95070 293 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 MT-CO2P00403 227 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 IFNA17P01571 189 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 CD3DP04234 171 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 CTSGP08311 255 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 ATF4P18848 351 aaPredicted RBP7.27□□□□□ -1.25
CIITA-207ENST00000571545 ADMP35318 185 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 MFAP2P55001 183 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 SURF2Q15527 256 aaPredicted RBP7.27□□□□□ -1.25
CIITA-207ENST00000571545 CTF1Q16619 201 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 TRIM16LQ309B1 348 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 GPR141Q7Z602 305 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 TMEM229BQ8NBD8 167 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 TMEM116Q8NCL8 245 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 TERB2Q8NHR7 220 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 GALNT14Q96FL9 552 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 CHRDL1Q9BU40 450 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 MRPS26Q9BYN8 205 aaKnown RBP7.27□□□□□ -1.25
CIITA-207ENST00000571545 NXF2Q9GZY0 626 aaKnown RBP7.27□□□□□ -1.25
CIITA-207ENST00000571545 SMPXQ9UHP9 88 aa7.27□□□□□ -1.25
CIITA-207ENST00000571545 C14orf166Q9Y224 244 aaKnown RBP7.27□□□□□ -1.25
CIITA-207ENST00000571545 TRAV14DV4A0A0A6YYC5 116 aa7.26□□□□□ -1.25
CIITA-207ENST00000571545 IGHV3-21A0A0B4J1V1 117 aa7.26□□□□□ -1.25
CIITA-207ENST00000571545 IGHV7-4-1A0A0J9YVY3 117 aa7.26□□□□□ -1.25
CIITA-207ENST00000571545 NUPR2A6NF83 97 aa7.26□□□□□ -1.25
CIITA-207ENST00000571545 F8W735 103 aaPredicted RBP7.26□□□□□ -1.25
CIITA-207ENST00000571545 RAB3DO95716 219 aa7.26□□□□□ -1.25
CIITA-207ENST00000571545 IGKV1-39P01597 117 aa7.26□□□□□ -1.25
CIITA-207ENST00000571545 CD74P04233 296 aa7.26□□□□□ -1.25
CIITA-207ENST00000571545 IGKV1D-39P04432 117 aa7.26□□□□□ -1.25
CIITA-207ENST00000571545 HOXA1P49639 335 aaPredicted RBP7.26□□□□□ -1.25
CIITA-207ENST00000571545 PPP5CP53041 499 aa7.26□□□□□ -1.25
CIITA-207ENST00000571545 SCGB2B2Q4G0G5 96 aa7.26□□□□□ -1.25
CIITA-207ENST00000571545 ZNF600Q6ZNG1 722 aa7.26□□□□□ -1.25
CIITA-207ENST00000571545 OR52I2Q8NH67 350 aa7.26□□□□□ -1.25
CIITA-207ENST00000571545 PINX1Q96BK5 328 aaKnown RBP7.26□□□□□ -1.25
CIITA-207ENST00000571545 NARS2Q96I59 477 aaKnown RBP7.26□□□□□ -1.25
CIITA-207ENST00000571545 BCL7BQ9BQE9 202 aa7.26□□□□□ -1.25
CIITA-207ENST00000571545 RHPN1-AS1Q9BWJ2 59 aa7.26□□□□□ -1.25
CIITA-207ENST00000571545 KLK11Q9UBX7 282 aa7.26□□□□□ -1.25
CIITA-207ENST00000571545 RPS10-NUDT3A0A1W2PQS6 291 aa7.25□□□□□ -1.25
CIITA-207ENST00000571545 A0A1W2PS18 150 aa7.25□□□□□ -1.25
CIITA-207ENST00000571545 DBX1A6NMT0 343 aa7.25□□□□□ -1.25
CIITA-207ENST00000571545 DISC1C4P0D8 188 aa7.25□□□□□ -1.25
CIITA-207ENST00000571545 CHEK1O14757 476 aa7.25□□□□□ -1.25
CIITA-207ENST00000571545 SPRY2O43597 315 aa7.25□□□□□ -1.25
CIITA-207ENST00000571545 NOL3O60936 208 aaKnown RBP7.25□□□□□ -1.25
CIITA-207ENST00000571545 CTSDP07339 412 aaPredicted RBP7.25□□□□□ -1.25
CIITA-207ENST00000571545 UCP1P25874 307 aa7.25□□□□□ -1.25
CIITA-207ENST00000571545 TNFRSF9Q07011 255 aa7.25□□□□□ -1.25
CIITA-207ENST00000571545 RNASE12Q5GAN4 147 aaKnown RBP7.25□□□□□ -1.25
CIITA-207ENST00000571545 STEAP1BQ6NZ63 245 aa7.25□□□□□ -1.25
CIITA-207ENST00000571545 OR13C8Q8NGS7 320 aa7.25□□□□□ -1.25
CIITA-207ENST00000571545 RAB2BQ8WUD1 216 aa7.25□□□□□ -1.25
CIITA-207ENST00000571545 TP53RKQ96S44 253 aa7.25□□□□□ -1.25
CIITA-207ENST00000571545 ABHD1Q96SE0 405 aa7.25□□□□□ -1.25
CIITA-207ENST00000571545 OVOL2Q9BRP0 275 aa7.25□□□□□ -1.25
CIITA-207ENST00000571545 TRAV30A0A087WSZ9 112 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 TRAV2A0A0B4J234 112 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 TEX13DA0A0J9YY54 714 aaPredicted RBP7.24□□□□□ -1.25
CIITA-207ENST00000571545 ST8SIA3O43173 380 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 DFFBO76075 338 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 IGKV1-5P01602 117 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 P0C879 139 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 SMIM18P0DKX4 95 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 OPRK1P41145 380 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 EIF2B2P49770 351 aaKnown RBP7.24□□□□□ -1.25
CIITA-207ENST00000571545 DHODHQ02127 395 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 DEFB135Q30KP9 77 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 ODF3L2Q3SX64 289 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 NOXA1Q86UR1 476 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 OR52E5Q8NH55 327 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 GATAD1Q8WUU5 269 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 SMIM4Q8WVI0 70 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 RBPMSQ93062 196 aaKnown RBP7.24□□□□□ -1.25
CIITA-207ENST00000571545 SCGB3A2Q96PL1 93 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 RNF2Q99496 336 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 PRRT1Q99946 306 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 CCDC59Q9P031 241 aaKnown RBP7.24□□□□□ -1.25
CIITA-207ENST00000571545 UBQLN2Q9UHD9 624 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 SELENOKQ9Y6D0 94 aa7.24□□□□□ -1.25
CIITA-207ENST00000571545 TENM2Q9NT68 2774 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms