RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 RAX2Q96IS3 184 aa10.26□□□□□ -0.77
CCDC40-205ENST00000571028 GPN1Q9HCN4 374 aaPredicted RBP10.26□□□□□ -0.77
CCDC40-205ENST00000571028 TMED3Q9Y3Q3 217 aa10.26□□□□□ -0.77
CCDC40-205ENST00000571028 A0A0G2JLM5 398 aa10.25□□□□□ -0.77
CCDC40-205ENST00000571028 CCL24O00175 119 aa10.25□□□□□ -0.77
CCDC40-205ENST00000571028 SCGB1D2O95969 90 aa10.25□□□□□ -0.77
CCDC40-205ENST00000571028 LGALS1P09382 135 aaKnown RBP10.25□□□□□ -0.77
CCDC40-205ENST00000571028 HIST1H1BP16401 226 aaKnown RBP10.25□□□□□ -0.77
CCDC40-205ENST00000571028 EXOSC2Q13868 293 aaKnown RBP10.25□□□□□ -0.77
CCDC40-205ENST00000571028 C15orf32Q32M92 178 aa10.25□□□□□ -0.77
CCDC40-205ENST00000571028 C9orf66Q5T8R8 295 aa10.25□□□□□ -0.77
CCDC40-205ENST00000571028 OR11H1Q8NG94 326 aa10.25□□□□□ -0.77
CCDC40-205ENST00000571028 OR1N2Q8NGR9 330 aa10.25□□□□□ -0.77
CCDC40-205ENST00000571028 MYOZ3Q8TDC0 251 aa10.25□□□□□ -0.77
CCDC40-205ENST00000571028 FANCD2OSQ96PS1 177 aa10.25□□□□□ -0.77
CCDC40-205ENST00000571028 P2RX4Q99571 388 aa10.25□□□□□ -0.77
CCDC40-205ENST00000571028 MAGT1Q9H0U3 335 aa10.25□□□□□ -0.77
CCDC40-205ENST00000571028 RBKSQ9H477 322 aa10.25□□□□□ -0.77
CCDC40-205ENST00000571028 HEYLQ9NQ87 328 aaPredicted RBP10.25□□□□□ -0.77
CCDC40-205ENST00000571028 GSKIPQ9P0R6 139 aa10.25□□□□□ -0.77
CCDC40-205ENST00000571028 F11RQ9Y624 299 aaKnown RBP10.25□□□□□ -0.77
CCDC40-205ENST00000571028 SACSQ9NZJ4 4579 aa10.25□□□□□ -0.77
CCDC40-205ENST00000571028 TRBV9A0A0B4J1U6 114 aa10.24□□□□□ -0.77
CCDC40-205ENST00000571028 C5orf51A6NDU8 294 aa10.24□□□□□ -0.77
CCDC40-205ENST00000571028 FAM223BA6NKX1 122 aa10.24□□□□□ -0.77
CCDC40-205ENST00000571028 CYB5BO43169 146 aa10.24□□□□□ -0.77
CCDC40-205ENST00000571028 LY86O95711 162 aa10.24□□□□□ -0.77
CCDC40-205ENST00000571028 IL5P05113 134 aa10.24□□□□□ -0.77
CCDC40-205ENST00000571028 IAPPP10997 89 aa10.24□□□□□ -0.77
CCDC40-205ENST00000571028 MFAP2P55001 183 aa10.24□□□□□ -0.77
CCDC40-205ENST00000571028 IAH1Q2TAA2 248 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-205ENST00000571028 FAM223AQ8IWN6 122 aa10.24□□□□□ -0.77
CCDC40-205ENST00000571028 NECAP1Q8NC96 275 aa10.24□□□□□ -0.77
CCDC40-205ENST00000571028 OR52E5Q8NH55 327 aa10.24□□□□□ -0.77
CCDC40-205ENST00000571028 PINX1Q96BK5 328 aaKnown RBP10.24□□□□□ -0.77
CCDC40-205ENST00000571028 USMG5Q96IX5 58 aa10.24□□□□□ -0.77
CCDC40-205ENST00000571028 ZMAT4Q9H898 229 aa10.24□□□□□ -0.77
CCDC40-205ENST00000571028 PAIP2BQ9ULR5 123 aaKnown RBP10.24□□□□□ -0.77
CCDC40-205ENST00000571028 DMRT1Q9Y5R6 373 aa10.24□□□□□ -0.77
CCDC40-205ENST00000571028 SMAD5-AS1Q9Y6J3 95 aa10.24□□□□□ -0.77
CCDC40-205ENST00000571028 IGLV11-55A0A075B6I3 123 aa10.23□□□□□ -0.77
CCDC40-205ENST00000571028 IGHV4OR15-8A0A075B7B6 117 aa10.23□□□□□ -0.77
CCDC40-205ENST00000571028 A0A087WW49 117 aa10.23□□□□□ -0.77
CCDC40-205ENST00000571028 I3L521 148 aa10.23□□□□□ -0.77
CCDC40-205ENST00000571028 PTTG1O95997 202 aa10.23□□□□□ -0.77
CCDC40-205ENST00000571028 IGHV3-48P01763 117 aa10.23□□□□□ -0.77
CCDC40-205ENST00000571028 TNFRSF9Q07011 255 aa10.23□□□□□ -0.77
CCDC40-205ENST00000571028 DTD1Q8TEA8 209 aa10.23□□□□□ -0.77
CCDC40-205ENST00000571028 EEF1AKMT3Q96AZ1 226 aa10.23□□□□□ -0.77
CCDC40-205ENST00000571028 OR10C1Q96KK4 312 aa10.23□□□□□ -0.77
CCDC40-205ENST00000571028 MARVELD1Q9BSK0 173 aa10.23□□□□□ -0.77
CCDC40-205ENST00000571028 HIPK2Q9H2X6 1198 aa10.23□□□□□ -0.77
CCDC40-205ENST00000571028 ZC4H2Q9NQZ6 224 aa10.23□□□□□ -0.77
CCDC40-205ENST00000571028 THYN1Q9P016 225 aa10.23□□□□□ -0.77
CCDC40-205ENST00000571028 MFSD2BA6NFX1 497 aa10.22□□□□□ -0.77
CCDC40-205ENST00000571028 GOSR2O14653 212 aa10.22□□□□□ -0.77
CCDC40-205ENST00000571028 PRAF2O60831 178 aa10.22□□□□□ -0.77
CCDC40-205ENST00000571028 PITX3O75364 302 aa10.22□□□□□ -0.77
CCDC40-205ENST00000571028 IFNA10P01566 189 aa10.22□□□□□ -0.77
CCDC40-205ENST00000571028 TRBV12-3P01733 135 aa10.22□□□□□ -0.77
CCDC40-205ENST00000571028 RNASE2P10153 161 aaKnown RBP10.22□□□□□ -0.77
CCDC40-205ENST00000571028 SUB1P53999 127 aaKnown RBP eCLIP10.22□□□□□ -0.77
CCDC40-205ENST00000571028 SLURP1P55000 103 aa10.22□□□□□ -0.77
CCDC40-205ENST00000571028 ZNF616Q08AN1 781 aa10.22□□□□□ -0.77
CCDC40-205ENST00000571028 RGS21Q2M5E4 152 aa10.22□□□□□ -0.77
CCDC40-205ENST00000571028 CLEC19AQ6UXS0 136 aa10.22□□□□□ -0.77
CCDC40-205ENST00000571028 UBAC2Q8NBM4 344 aa10.22□□□□□ -0.77
CCDC40-205ENST00000571028 OR1P1Q8NH06 330 aa10.22□□□□□ -0.77
CCDC40-205ENST00000571028 HSPB7Q9UBY9 170 aa10.22□□□□□ -0.77
CCDC40-205ENST00000571028 ZNF256Q9Y2P7 627 aaPredicted RBP10.22□□□□□ -0.77
CCDC40-205ENST00000571028 SEC14L6B5MCN3 397 aa10.21□□□□□ -0.77
CCDC40-205ENST00000571028 LINC01619G3V211 115 aa10.21□□□□□ -0.77
CCDC40-205ENST00000571028 WRBO00258 174 aa10.21□□□□□ -0.77
CCDC40-205ENST00000571028 SSNA1O43805 119 aa10.21□□□□□ -0.77
CCDC40-205ENST00000571028 BRI3O95415 125 aa10.21□□□□□ -0.77
CCDC40-205ENST00000571028 SIX6O95475 246 aa10.21□□□□□ -0.77
CCDC40-205ENST00000571028 HSPB1P04792 205 aaKnown RBP10.21□□□□□ -0.77
CCDC40-205ENST00000571028 SLC25A6P12236 298 aa10.21□□□□□ -0.77
CCDC40-205ENST00000571028 AARDQ4LEZ3 155 aa10.21□□□□□ -0.77
CCDC40-205ENST00000571028 ZNF343Q6P1L6 599 aa10.21□□□□□ -0.77
CCDC40-205ENST00000571028 ADAMTSL5Q6ZMM2 481 aa10.21□□□□□ -0.77
CCDC40-205ENST00000571028 ZBTB8BQ8NAP8 495 aaPredicted RBP10.21□□□□□ -0.77
CCDC40-205ENST00000571028 OR1L6Q8NGR2 347 aa10.21□□□□□ -0.77
CCDC40-205ENST00000571028 PEF1Q9UBV8 284 aaKnown RBP10.21□□□□□ -0.77
CCDC40-205ENST00000571028 PPP5D1E7EU14 171 aa10.2□□□□□ -0.78
CCDC40-205ENST00000571028 MED6O75586 246 aa10.2□□□□□ -0.78
CCDC40-205ENST00000571028 JTBO76095 146 aa10.2□□□□□ -0.78
CCDC40-205ENST00000571028 MT-CO2P00403 227 aa10.2□□□□□ -0.78
CCDC40-205ENST00000571028 OR8U8P0C7N1 319 aa10.2□□□□□ -0.78
CCDC40-205ENST00000571028 HTR2BP41595 481 aa10.2□□□□□ -0.78
CCDC40-205ENST00000571028 NKX2-1P43699 371 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-205ENST00000571028 POLR2GP62487 172 aaKnown RBP eCLIP10.2□□□□□ -0.78
CCDC40-205ENST00000571028 RUNX1Q01196 453 aa10.2□□□□□ -0.78
CCDC40-205ENST00000571028 TATDN3Q17R31 274 aa10.2□□□□□ -0.78
CCDC40-205ENST00000571028 Q56UQ5 140 aa10.2□□□□□ -0.78
CCDC40-205ENST00000571028 GSG1LQ6UXU4 331 aa10.2□□□□□ -0.78
CCDC40-205ENST00000571028 SBSPONQ8IVN8 264 aa10.2□□□□□ -0.78
CCDC40-205ENST00000571028 SLC24A4Q8NFF2 622 aa10.2□□□□□ -0.78
CCDC40-205ENST00000571028 OR4D5Q8NGN0 318 aa10.2□□□□□ -0.78
CCDC40-205ENST00000571028 SCARB1Q8WTV0 552 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms