RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 SMIM8Q96KF7 97 aa5.18□□□□□ -1.58
CTDNEP1-204ENST00000570484 HYLS1Q96M11 299 aa5.18□□□□□ -1.58
CTDNEP1-204ENST00000570484 NOL4LQ96MY1 436 aaPredicted RBP5.18□□□□□ -1.58
CTDNEP1-204ENST00000570484 SLA2Q9H6Q3 261 aa5.18□□□□□ -1.58
CTDNEP1-204ENST00000570484 ARHGAP32A7KAX9 2087 aa5.18□□□□□ -1.58
CTDNEP1-204ENST00000570484 VPS13CQ709C8 3753 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 A0A1B0GUS0 222 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 A0A1B0GW64 132 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 CGB1A6NKQ9 187 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 FAM223BA6NKX1 122 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 E7EUB6 86 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 TRGV3P03979 118 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 HNRNPCP07910 306 aaKnown RBP eCLIP5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 METTL15P1P0C7V9 234 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 RNASE2P10153 161 aaKnown RBP5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 SLC25A4P12235 298 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 CTRB1P17538 263 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 C4BPBP20851 252 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 RPL12P30050 165 aaKnown RBP5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 SULT1A1P50225 295 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 AP2S1P53680 142 aaPredicted RBP5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 RHOGP84095 191 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 EWSR1Q01844 656 aaKnown RBP eCLIP5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 SLC38A11Q08AI6 406 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 IL15RAQ13261 267 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 CTRB2Q6GPI1 263 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 TEX38Q6PEX7 206 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 ETV3LQ6ZN32 361 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 SLC16A13Q7RTY0 426 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 FAM223AQ8IWN6 122 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 TTC9CQ8N5M4 171 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 KLHDC1Q8N7A1 406 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 TMEM217Q8N7C4 229 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 OR1S2Q8NGQ3 325 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 RNASEH2CQ8TDP1 164 aaKnown RBP5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 OR4C12Q96R67 309 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 P2RX4Q99571 388 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 MFFQ9GZY8 342 aa5.17□□□□□ -1.58
CTDNEP1-204ENST00000570484 ABCA1O95477 2261 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 DOCK11Q5JSL3 2073 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 A0A0G2JLM5 398 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 UBE2L5PA0A1B0GUS4 154 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 KANTRA0A1W2PQU2 76 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 IGSF23A1L1A6 192 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 TMEM89A2RUT3 159 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 CLPSL1A2RUU4 121 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 FAM24AA6NFZ4 105 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 LINC01548A6NM66 108 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 C15orf62A8K5M9 175 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 H0YIZ8 118 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 OR2J3O76001 311 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 DFFBO76075 338 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 CST7O76096 145 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 TMEM50AO95807 157 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 PRH1P02810 166 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 CRYGCP07315 174 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 ELANEP08246 267 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 HKR1P10072 659 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 EGR2P11161 476 aaPredicted RBP5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 LYL1P12980 280 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 S100A11P31949 105 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 SRSF2Q01130 221 aaKnown RBP5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 FOXL1Q12952 345 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 FOXE3Q13461 319 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 OR2F1Q13607 317 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 ZNF345Q14585 488 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 CLINT1Q14677 625 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 BSXQ3C1V8 233 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 FAM209BQ5JX69 171 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 ASPHD1Q5U4P2 390 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 ACSM6Q6P461 480 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 C19orf35Q6ZS72 473 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 ACOT7LQ6ZUV0 252 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 ZNF329Q86UD4 541 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 TMEM252Q8N6L7 170 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 UBAC2Q8NBM4 344 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 NECAP1Q8NC96 275 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 EEF1AKMT3Q96AZ1 226 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 ACY3Q96HD9 319 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 CXorf58Q96LI9 332 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 MS4A10Q96PG2 267 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 AQP10Q96PS8 301 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 NEURL2Q9BR09 285 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 TMEM147Q9BVK8 224 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 C16orf95Q9H693 158 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 UQCC1Q9NVA1 299 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 FBXL7Q9UJT9 491 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 TNFSF18Q9UNG2 199 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 RNF114Q9Y508 228 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 HSPB11Q9Y547 144 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 CELSR1Q9NYQ6 3014 aa5.16□□□□□ -1.58
CTDNEP1-204ENST00000570484 IGLV11-55A0A075B6I3 123 aa5.15□□□□□ -1.59
CTDNEP1-204ENST00000570484 BORCS7-ASMTA0A0B4J1R7 106 aa5.15□□□□□ -1.59
CTDNEP1-204ENST00000570484 A0A0D9SG52 128 aa5.15□□□□□ -1.59
CTDNEP1-204ENST00000570484 HMSDA8MTL9 139 aa5.15□□□□□ -1.59
CTDNEP1-204ENST00000570484 NUDT19A8MXV4 375 aa5.15□□□□□ -1.59
CTDNEP1-204ENST00000570484 BOLA2-SMG1P6H3BVE0 249 aa5.15□□□□□ -1.59
CTDNEP1-204ENST00000570484 MT-CO2P00403 227 aa5.15□□□□□ -1.59
CTDNEP1-204ENST00000570484 IFNA5P01569 189 aa5.15□□□□□ -1.59
CTDNEP1-204ENST00000570484 IGHG4P01861 327 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms