RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 MISP3Q96FF7 219 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 BSCL2Q96G97 398 aaPredicted RBP4.87□□□□□ -1.63
CYLD-216ENST00000569891 ACY3Q96HD9 319 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 OR5B12Q96R08 314 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 HILPDAQ9Y5L2 63 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 HAGHQ16775 308 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 C5orf64Q2M2E5 130 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 CYP2G1PQ6ZSU1 146 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 CTDSP1Q9GZU7 261 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 ICE1Q9Y2F5 2266 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 RAI1Q7Z5J4 1906 aaPredicted RBP4.87□□□□□ -1.63
CYLD-216ENST00000569891 PMS2P5A8MQ11 134 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 NPFFO15130 113 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 CEBPGP53567 150 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 MEF2BQ02080 365 aaPredicted RBP4.87□□□□□ -1.63
CYLD-216ENST00000569891 FXYD3Q14802 87 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 ACSM6Q6P461 480 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 RXFP4Q8TDU9 374 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 RAB24Q969Q5 203 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 TRGV9Q99603 122 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 SIRPDQ9H106 197 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 SLC25A22Q9H936 323 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 RPS10P5Q9NQ39 176 aa4.87□□□□□ -1.63
CYLD-216ENST00000569891 F11RQ9Y624 299 aaKnown RBP4.87□□□□□ -1.63
CYLD-216ENST00000569891 DSCAMO60469 2012 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 IGHV4-39P01824 125 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 HABP2Q14520 560 aaPredicted RBP4.86□□□□□ -1.63
CYLD-216ENST00000569891 CDSNQ15517 529 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 CST9LP1Q5W188 147 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 ZNF562Q6V9R5 426 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 STPG3Q8N7X2 389 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 ARPC1AQ92747 370 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 SSX3Q99909 188 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 CHRDL1Q9BU40 450 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 GGTLC1Q9BX51 225 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 NAT8Q9UHE5 227 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 ARFGEF3Q5TH69 2177 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 HCFC1P51610 2035 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 IGHV3-72A0A0B4J1Y9 119 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 TRAV3A0A0B4J244 114 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 ZNF727A8MUV8 499 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 LY6LH3BQJ8 138 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 S100A9P06702 114 aaKnown RBP4.86□□□□□ -1.63
CYLD-216ENST00000569891 MSMBP08118 114 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 OR10J1P30954 320 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 MFAP4P55083 255 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 ARL16Q0P5N6 197 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 C10orf113Q5VZT2 155 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 PVRIGQ6DKI7 326 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 HAPLN4Q86UW8 402 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 LINC01356Q8N9X3 169 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 CLRN3Q8NCR9 226 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 EAF1Q96JC9 268 aaPredicted RBP4.86□□□□□ -1.63
CYLD-216ENST00000569891 TXN2Q99757 166 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 FBXL15Q9H469 300 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 DNAJC4Q9NNZ3 241 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 FUT9Q9Y231 359 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 YLPM1P49750 1951 aaKnown RBP4.86□□□□□ -1.63
CYLD-216ENST00000569891 ALMS1Q8TCU4 4167 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 SPTBN4Q9H254 2564 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 A0A1B0GV50 99 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 A0A1W2PPI3 338 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 TCRBV4S1A1TA0A5B7 111 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 NDUFA3O95167 84 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 C8orf88P0DMB2 117 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 CLEC12BQ2HXU8 276 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 C10orf91Q5T1B1 145 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 FAM53AQ6NSI3 398 aaPredicted RBP4.86□□□□□ -1.63
CYLD-216ENST00000569891 PRR14LQ5THK1 2151 aa4.86□□□□□ -1.63
CYLD-216ENST00000569891 CXorf65A6NEN9 183 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 NPIPB5A8MRT5 1133 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 C19orf84I3L1E1 186 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 K7EQM0 130 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 HOXB4P17483 251 aaPredicted RBP4.85□□□□□ -1.63
CYLD-216ENST00000569891 FHITP49789 147 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 EBI3Q14213 229 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 BSXQ3C1V8 233 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 TIGITQ495A1 244 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 FAM78BQ5VT40 261 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 KCNIP4Q6PIL6 250 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 OR4F5Q8NH21 305 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 Q8WTZ3 238 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 OR4F4Q96R69 305 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 ATP6V0BQ99437 205 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 SMIM7Q9BQ49 75 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 TNFRSF19Q9NS68 423 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 TLN1Q9Y490 2541 aaKnown RBP4.85□□□□□ -1.63
CYLD-216ENST00000569891 COL6A6A6NMZ7 2263 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 J3QKU1 62 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 OR7C2O60412 319 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 HYPMO75409 117 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 C1QL1O75973 258 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 IGLV2-23P01705 113 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 OPN1MWP04001 364 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 OPN1MW2P0DN77 364 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 OPN1MW3P0DN78 364 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 LMO4P61968 165 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 TMEM241Q24JQ0 296 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 C11orf42Q8N5U0 333 aa4.85□□□□□ -1.63
CYLD-216ENST00000569891 C15orf54Q8N8G6 183 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms