RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 C19orf35Q6ZS72 473 aa9.88□□□□□ -0.83
SPG7-221ENST00000569720 TMED4Q7Z7H5 227 aa9.88□□□□□ -0.83
SPG7-221ENST00000569720 LYG2Q86SG7 212 aa9.88□□□□□ -0.83
SPG7-221ENST00000569720 FAM219AQ8IW50 185 aa9.88□□□□□ -0.83
SPG7-221ENST00000569720 SPAG16Q8N0X2 631 aa9.88□□□□□ -0.83
SPG7-221ENST00000569720 LGI3Q8N145 548 aa9.88□□□□□ -0.83
SPG7-221ENST00000569720 COQ8AQ8NI60 647 aa9.88□□□□□ -0.83
SPG7-221ENST00000569720 CXorf58Q96LI9 332 aa9.88□□□□□ -0.83
SPG7-221ENST00000569720 CCDC140Q96MF4 163 aa9.88□□□□□ -0.83
SPG7-221ENST00000569720 TMEM56Q96MV1 263 aa9.88□□□□□ -0.83
SPG7-221ENST00000569720 WFDC10AQ9H1F0 79 aa9.88□□□□□ -0.83
SPG7-221ENST00000569720 BET1LQ9NYM9 111 aa9.88□□□□□ -0.83
SPG7-221ENST00000569720 TMEM56-RWDD3S4R434 201 aa9.88□□□□□ -0.83
SPG7-221ENST00000569720 EPPK1P58107 5090 aaKnown RBP9.88□□□□□ -0.83
SPG7-221ENST00000569720 A8MWP6 167 aa9.87□□□□□ -0.83
SPG7-221ENST00000569720 TNFSF12O43508 249 aa9.87□□□□□ -0.83
SPG7-221ENST00000569720 NQO2P16083 231 aa9.87□□□□□ -0.83
SPG7-221ENST00000569720 EDN2P20800 178 aa9.87□□□□□ -0.83
SPG7-221ENST00000569720 BRWD1-AS2P59051 145 aa9.87□□□□□ -0.83
SPG7-221ENST00000569720 KLK9Q2XQG4 91 aa9.87□□□□□ -0.83
SPG7-221ENST00000569720 C4orf46Q504U0 113 aa9.87□□□□□ -0.83
SPG7-221ENST00000569720 OR52B4Q8NGK2 314 aa9.87□□□□□ -0.83
SPG7-221ENST00000569720 ZNF431Q8TF32 576 aaPredicted RBP9.87□□□□□ -0.83
SPG7-221ENST00000569720 GLYATL2Q8WU03 294 aa9.87□□□□□ -0.83
SPG7-221ENST00000569720 MITD1Q8WV92 249 aa9.87□□□□□ -0.83
SPG7-221ENST00000569720 CACNG8Q8WXS5 425 aa9.87□□□□□ -0.83
SPG7-221ENST00000569720 GPHA2Q96T91 129 aa9.87□□□□□ -0.83
SPG7-221ENST00000569720 THYN1Q9P016 225 aa9.87□□□□□ -0.83
SPG7-221ENST00000569720 KLK9Q9UKQ9 250 aa9.87□□□□□ -0.83
SPG7-221ENST00000569720 S4R3C0 116 aa9.87□□□□□ -0.83
SPG7-221ENST00000569720 TRAV6A0A075B6T7 132 aa9.86□□□□□ -0.83
SPG7-221ENST00000569720 A0A1B0GW64 132 aa9.86□□□□□ -0.83
SPG7-221ENST00000569720 TMEM213A2RRL7 107 aa9.86□□□□□ -0.83
SPG7-221ENST00000569720 C9orf170A2RU37 121 aa9.86□□□□□ -0.83
SPG7-221ENST00000569720 CYB5BO43169 146 aa9.86□□□□□ -0.83
SPG7-221ENST00000569720 REG1AP05451 166 aa9.86□□□□□ -0.83
SPG7-221ENST00000569720 SLC25A6P12236 298 aa9.86□□□□□ -0.83
SPG7-221ENST00000569720 PI3P19957 117 aa9.86□□□□□ -0.83
SPG7-221ENST00000569720 ERVK-16P61578 105 aa9.86□□□□□ -0.83
SPG7-221ENST00000569720 DHRS2Q13268 280 aa9.86□□□□□ -0.83
SPG7-221ENST00000569720 TMEM187Q14656 261 aa9.86□□□□□ -0.83
SPG7-221ENST00000569720 TMEM61Q8N0U2 210 aa9.86□□□□□ -0.83
SPG7-221ENST00000569720 UXS1Q8NBZ7 420 aa9.86□□□□□ -0.83
SPG7-221ENST00000569720 OR51H1Q8NH63 302 aa9.86□□□□□ -0.83
SPG7-221ENST00000569720 RBPMSQ93062 196 aaKnown RBP9.86□□□□□ -0.83
SPG7-221ENST00000569720 LSM10Q969L4 123 aaKnown RBP9.86□□□□□ -0.83
SPG7-221ENST00000569720 MARC2Q969Z3 335 aa9.86□□□□□ -0.83
SPG7-221ENST00000569720 TMEM230Q96A57 120 aa9.86□□□□□ -0.83
SPG7-221ENST00000569720 COMMD5Q9GZQ3 224 aa9.86□□□□□ -0.83
SPG7-221ENST00000569720 TMED3Q9Y3Q3 217 aa9.86□□□□□ -0.83
SPG7-221ENST00000569720 IGLV11-55A0A075B6I3 123 aa9.85□□□□□ -0.83
SPG7-221ENST00000569720 TRAV25A0A0B4J276 109 aa9.85□□□□□ -0.83
SPG7-221ENST00000569720 C7orf66A4D0T2 115 aa9.85□□□□□ -0.83
SPG7-221ENST00000569720 CLEC3BP05452 202 aa9.85□□□□□ -0.83
SPG7-221ENST00000569720 OR5AC1P0C628 307 aa9.85□□□□□ -0.83
SPG7-221ENST00000569720 MYOD1P15172 320 aa9.85□□□□□ -0.83
SPG7-221ENST00000569720 VAMP1P23763 118 aa9.85□□□□□ -0.83
SPG7-221ENST00000569720 OR2B8PP59922 312 aa9.85□□□□□ -0.83
SPG7-221ENST00000569720 SUPT4H1P63272 117 aaKnown RBP9.85□□□□□ -0.83
SPG7-221ENST00000569720 PPP1R1AQ13522 171 aa9.85□□□□□ -0.83
SPG7-221ENST00000569720 RBPMS2Q6ZRY4 209 aaKnown RBP9.85□□□□□ -0.83
SPG7-221ENST00000569720 ASB13Q8WXK3 278 aa9.85□□□□□ -0.83
SPG7-221ENST00000569720 SRSF8Q9BRL6 282 aaKnown RBP9.85□□□□□ -0.83
SPG7-221ENST00000569720 GGTLC1Q9BX51 225 aa9.85□□□□□ -0.83
SPG7-221ENST00000569720 FKBP11Q9NYL4 201 aa9.85□□□□□ -0.83
SPG7-221ENST00000569720 MLXQ9UH92 298 aa9.85□□□□□ -0.83
SPG7-221ENST00000569720 FLVCR2Q9UPI3 526 aa9.85□□□□□ -0.83
SPG7-221ENST00000569720 UFC1Q9Y3C8 167 aa9.85□□□□□ -0.83
SPG7-221ENST00000569720 HYDINQ4G0P3 5121 aa9.84□□□□□ -0.83
SPG7-221ENST00000569720 LOC102724200A0A096LPH7 203 aaPredicted RBP9.84□□□□□ -0.83
SPG7-221ENST00000569720 MFSD2BA6NFX1 497 aa9.84□□□□□ -0.83
SPG7-221ENST00000569720 UPK2O00526 184 aa9.84□□□□□ -0.83
SPG7-221ENST00000569720 SCAF4O95104 1147 aaKnown RBP9.84□□□□□ -0.83
SPG7-221ENST00000569720 IFNA21P01568 189 aa9.84□□□□□ -0.83
SPG7-221ENST00000569720 ANXA7P20073 488 aaKnown RBP9.84□□□□□ -0.83
SPG7-221ENST00000569720 GPR183P32249 361 aa9.84□□□□□ -0.83
SPG7-221ENST00000569720 LPAR6P43657 344 aa9.84□□□□□ -0.83
SPG7-221ENST00000569720 ELLP55199 621 aaPredicted RBP9.84□□□□□ -0.83
SPG7-221ENST00000569720 ZNF585BQ52M93 769 aa9.84□□□□□ -0.83
SPG7-221ENST00000569720 THOC7Q6I9Y2 204 aaKnown RBP9.84□□□□□ -0.83
SPG7-221ENST00000569720 BTNL8Q6UX41 500 aa9.84□□□□□ -0.83
SPG7-221ENST00000569720 DMBX1Q8NFW5 382 aa9.84□□□□□ -0.83
SPG7-221ENST00000569720 RRNAD1Q96FB5 475 aaKnown RBP9.84□□□□□ -0.83
SPG7-221ENST00000569720 TP53RKQ96S44 253 aa9.84□□□□□ -0.83
SPG7-221ENST00000569720 MRPL27Q9P0M9 148 aaKnown RBP9.84□□□□□ -0.83
SPG7-221ENST00000569720 SELENOKQ9Y6D0 94 aa9.84□□□□□ -0.83
SPG7-221ENST00000569720 ALMS1Q8TCU4 4167 aa9.84□□□□□ -0.83
SPG7-221ENST00000569720 BIRC6Q9NR09 4857 aa9.84□□□□□ -0.83
SPG7-221ENST00000569720 CGB1A6NKQ9 187 aa9.83□□□□□ -0.84
SPG7-221ENST00000569720 TM4SF20Q53R12 229 aa9.83□□□□□ -0.84
SPG7-221ENST00000569720 HSD17B13Q7Z5P4 300 aaPredicted RBP9.83□□□□□ -0.84
SPG7-221ENST00000569720 C12orf45Q8N5I9 185 aaPredicted RBP9.83□□□□□ -0.84
SPG7-221ENST00000569720 OR1L6Q8NGR2 347 aa9.83□□□□□ -0.84
SPG7-221ENST00000569720 ZNF502Q8TBZ5 544 aa9.83□□□□□ -0.84
SPG7-221ENST00000569720 QTRT1Q9BXR0 403 aaKnown RBP9.83□□□□□ -0.84
SPG7-221ENST00000569720 TMEM140Q9NV12 185 aa9.83□□□□□ -0.84
SPG7-221ENST00000569720 TRAV3A0A0B4J244 114 aa9.82□□□□□ -0.84
SPG7-221ENST00000569720 A0A1B0GU03 582 aa9.82□□□□□ -0.84
SPG7-221ENST00000569720 IGLC7A0M8Q6 106 aa9.82□□□□□ -0.84
SPG7-221ENST00000569720 DBX1A6NMT0 343 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms